Cow genome map
| Conread name: | Ss1.1-Thy1-THY010205G02.5 |
| Conread position: | 65-407 |
| Cow position: | |
| Alignm length: | 357 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 33, 71 |
| Conread position: | 73-283 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 73-371 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 127 |
| Conread position: | 73-404 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 102-407 |
| Cow position: | |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 193, 27 |
| Conread position: | 105-267 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 24 |
| Conread position: | 105-285 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 74, 24 |
| Conread position: | 105-318 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 82, 24 |
| Conread position: | 105-327 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 68, 25 |
| Conread position: | 105-363 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 74, 24 |
| Conread position: | 105-406 |
| Cow position: | |
| Alignm length: | 322 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 74, 22 |
| Conread position: | 108-253 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 36, 94 |
| Conread position: | 108-268 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 108-293 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 71, 93 |
| Conread position: | 108-343 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 119 |
| Conread position: | 109-294 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 109-299 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 90 |
| Conread position: | 109-300 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 75 |
| Conread position: | 109-354 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 90 |
| Conread position: | 109-379 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 245, 16 |
| Conread position: | 109-380 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 109-388 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 69 |
| Conread position: | 109-389 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 73 |
| Conread position: | 109-404 |
| Cow position: | |
| Alignm length: | 320 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 226 |
| Conread position: | 109-404 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 21, 73 |
| Conread position: | 109-406 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 152, 28 |
| Conread position: | 109-406 |
| Cow position: | |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 109-407 |
| Cow position: | |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 109-407 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 224 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 20, 155 |
| Conread position: | 110-300 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 95 |
| Conread position: | 110-357 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 153 |
| Conread position: | 110-358 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 110-358 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 78 |
| Conread position: | 110-387 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 17, 65 |
| Conread position: | 114-282 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 148 |
| Conread position: | 114-293 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 17, 97 |
| Conread position: | 114-407 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 105 |
| Conread position: | 116-267 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 7 |
| Conread position: | 116-267 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 15, 73 |
| Conread position: | 116-379 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 127, 44 |
| Conread position: | 117-261 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 63, 12 |
| Conread position: | 117-300 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 60, 12 |
| Conread position: | 117-407 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 85 |
| Conread position: | 117-570 |
| Cow position: | |
| Alignm length: | 478 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 62, 12 |
| Conread position: | 121-315 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 121-377 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 80 |
| Conread position: | 122-559 |
| Cow position: | |
| Alignm length: | 463 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 132, 53 |
| Conread position: | 123-267 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 53, 76 |
| Conread position: | 123-300 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 58, 76 |
| Conread position: | 123-305 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 123-317 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 123-385 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 54, 247 |
| Conread position: | 123-410 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 59, 92 |
| Conread position: | 123-482 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 90 |
| Conread position: | 123-483 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 56, 77 |
| Conread position: | 127-254 |
| Cow position: | |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 78 |
| Conread position: | 127-274 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 127-483 |
| Cow position: | |
| Alignm length: | 365 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 62 |
| Conread position: | 128-251 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 60, 47 |
| Conread position: | 128-276 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 128-318 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 51, 154 |
| Conread position: | 128-334 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 14, 188 |
| Conread position: | 128-363 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 128-366 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 128-406 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 118 |
| Conread position: | 128-407 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 51, 76 |
| Conread position: | 128-407 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 49, 25 |
| Conread position: | 128-407 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 128-407 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 49, 191 |
| Conread position: | 128-433 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 87 |
| Conread position: | 128-475 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 157, 66 |
| Conread position: | 128-475 |
| Cow position: | |
| Alignm length: | 361 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 169 |
| Conread position: | 128-489 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 196 |
| Conread position: | 129-374 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 71 |
| Conread position: | 129-404 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 119, 48 |
| Conread position: | 130-294 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 49, 69 |
| Conread position: | 130-363 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 44, 194 |
| Conread position: | 130-387 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 47, 78 |
| Conread position: | 130-388 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 92, 67 |
| Conread position: | 130-421 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 48 |
| Conread position: | 132-257 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 125 |
| Conread position: | 132-389 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 158 |
| Conread position: | 135-407 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 76, 7 |
| Conread position: | 146-406 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 103, 31 |
| Conread position: | 147-407 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 92, 30 |
| Conread position: | 164-398 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 127, 13 |
| Conread position: | 172-574 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 89 |
| Conread position: | 178-314 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 109 |
| Conread position: | 186-408 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 33, 138 |
| Conread position: | 200-482 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 55, 132 |
| Conread position: | 406-570 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 89, 42 |
| Conread position: | 409-567 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 122, 43 |
| Conread position: | 425-574 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 120, 29 |
Show alignments to all cow chromosomes.