Cow genome map
| Conread name: | Ss1.1-Thy1-THY010205G02.5 |
| Conread position: | 47-392 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 17, 69 |
| Conread position: | 73-274 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 38, 58 |
| Conread position: | 73-403 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 243 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 37, 98 |
| Conread position: | 74-407 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 37, 112 |
| Conread position: | 101-300 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 80, 22 |
| Conread position: | 101-375 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 96, 25 |
| Conread position: | 103-301 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 5, 21 |
| Conread position: | 105-269 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 74, 24 |
| Conread position: | 105-407 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 70, 24 |
| Conread position: | 105-500 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 74, 24 |
| Conread position: | 107-258 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 23 |
| Conread position: | 107-267 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 69, 20 |
| Conread position: | 107-475 |
| Cow position: | |
| Alignm length: | 373 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 108-259 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 38 |
| Conread position: | 108-261 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 108-266 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 102 |
| Conread position: | 108-267 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 25, 76 |
| Conread position: | 108-268 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 95 |
| Conread position: | 108-300 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 71, 22 |
| Conread position: | 108-386 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 41 |
| Conread position: | 108-407 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 224 |
| Conread position: | 109-260 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 68, 75 |
| Conread position: | 109-263 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 35, 75 |
| Conread position: | 109-293 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 26 |
| Conread position: | 109-295 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 22, 152 |
| Conread position: | 109-297 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 64 |
| Conread position: | 109-300 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 92 |
| Conread position: | 109-300 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 31 |
| Conread position: | 109-352 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 22, 113 |
| Conread position: | 109-366 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 68, 90 |
| Conread position: | 109-404 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 21, 65 |
| Conread position: | 109-406 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 109-407 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 115 |
| Conread position: | 109-407 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 22, 221 |
| Conread position: | 109-482 |
| Cow position: | |
| Alignm length: | 389 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 22, 96 |
| Conread position: | 109-574 |
| Cow position: | |
| Alignm length: | 481 |
| Alignm identity: | 311 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 22, 130 |
| Conread position: | 110-270 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 110-285 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 110-377 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 223 |
| Conread position: | 111-407 |
| Cow position: | |
| Alignm length: | 307 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 114-283 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 114-571 |
| Cow position: | |
| Alignm length: | 482 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 116-268 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 116-268 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 80 |
| Conread position: | 116-271 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 89 |
| Conread position: | 116-278 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 85 |
| Conread position: | 116-482 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 57, 81 |
| Conread position: | 117-269 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 28, 12 |
| Conread position: | 117-271 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 80 |
| Conread position: | 117-273 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 14, 84 |
| Conread position: | 117-277 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 117-284 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 67, 12 |
| Conread position: | 117-318 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 117-324 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 137, 12 |
| Conread position: | 118-377 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 45 |
| Conread position: | 120-300 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 122-249 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 122-267 |
| Cow position: | |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 70 |
| Conread position: | 122-293 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 76, 55 |
| Conread position: | 123-294 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 85 |
| Conread position: | 123-318 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 74 |
| Conread position: | 123-377 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 52, 177 |
| Conread position: | 123-379 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 56, 139 |
| Conread position: | 123-574 |
| Cow position: | |
| Alignm length: | 476 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 133 |
| Conread position: | 124-573 |
| Cow position: | |
| Alignm length: | 461 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 53 |
| Conread position: | 127-266 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 73 |
| Conread position: | 127-268 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 127-282 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 66 |
| Conread position: | 127-292 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 108 |
| Conread position: | 127-574 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 22 |
| Conread position: | 128-261 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 74 |
| Conread position: | 128-267 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 47, 65 |
| Conread position: | 128-277 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 72 |
| Conread position: | 128-278 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 128-286 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 129, 49 |
| Conread position: | 128-298 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 71 |
| Conread position: | 128-300 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 43, 158 |
| Conread position: | 128-300 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 100 |
| Conread position: | 128-300 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 68 |
| Conread position: | 128-318 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 53, 71 |
| Conread position: | 128-360 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 79 |
| Conread position: | 128-366 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 128-389 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 160, 13 |
| Conread position: | 128-401 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 201 |
| Conread position: | 128-406 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 167, 33 |
| Conread position: | 128-407 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 44, 58 |
| Conread position: | 128-407 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 45, 93 |
| Conread position: | 128-407 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 144, 47 |
| Conread position: | 128-534 |
| Cow position: | |
| Alignm length: | 421 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 130 |
| Conread position: | 129-381 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 41, 49 |
| Conread position: | 130-277 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 125, 67 |
| Conread position: | 130-407 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 187 |
| Conread position: | 131-321 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 183 |
| Conread position: | 131-332 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 161 |
| Conread position: | 132-407 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 45 |
| Conread position: | 137-363 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 187 |
| Conread position: | 142-505 |
| Cow position: | |
| Alignm length: | 380 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 40 |
| Conread position: | 150-367 |
| Cow position: | |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 138 |
| Conread position: | 161-406 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 94, 33 |
| Conread position: | 187-375 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 189-407 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 197-407 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 94, 115 |
| Conread position: | 200-572 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 256 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 64, 96 |
| Conread position: | 297-569 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 406-572 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 125, 45 |
| Conread position: | 409-572 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.