Cow genome map
| Conread name: | Ss1.1-Thy1-THY010205G02.5 |
| Conread position: | 73-385 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 24, 163 |
| Conread position: | 74-358 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 263 |
| Conread position: | 101-363 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 5, 29 |
| Conread position: | 102-255 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 105-363 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 105-379 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 105-379 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 105-379 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 24 |
| Conread position: | 105-389 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 213 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 74, 25 |
| Conread position: | 105-407 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 24 |
| Conread position: | 105-572 |
| Cow position: | |
| Alignm length: | 495 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 108-277 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 32, 93 |
| Conread position: | 108-277 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 95 |
| Conread position: | 108-279 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 73, 37 |
| Conread position: | 108-299 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 96 |
| Conread position: | 109-258 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 22, 109 |
| Conread position: | 109-284 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 77, 23 |
| Conread position: | 109-293 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 119 |
| Conread position: | 109-363 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 22, 203 |
| Conread position: | 109-366 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 94, 36 |
| Conread position: | 109-387 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 19, 74 |
| Conread position: | 109-389 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 21, 57 |
| Conread position: | 109-392 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 109-398 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 68 |
| Conread position: | 109-406 |
| Cow position: | |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 22, 89 |
| Conread position: | 109-406 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 110 |
| Conread position: | 109-410 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 109-456 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 109-475 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 22, 219 |
| Conread position: | 109-576 |
| Cow position: | |
| Alignm length: | 481 |
| Alignm identity: | 310 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 91 |
| Conread position: | 110-277 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 110-336 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 21, 71 |
| Conread position: | 110-378 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 21, 71 |
| Conread position: | 110-490 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 31 |
| Conread position: | 114-377 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 64, 24 |
| Conread position: | 114-385 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 83, 68 |
| Conread position: | 117-249 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 62, 12 |
| Conread position: | 117-404 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 90 |
| Conread position: | 118-407 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 123-255 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 123-261 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 74 |
| Conread position: | 123-275 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 73, 18 |
| Conread position: | 123-298 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 55, 94 |
| Conread position: | 123-407 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 57, 43 |
| Conread position: | 123-532 |
| Cow position: | |
| Alignm length: | 436 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 55 |
| Conread position: | 123-572 |
| Cow position: | |
| Alignm length: | 472 |
| Alignm identity: | 322 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 57, 68 |
| Conread position: | 124-265 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 57, 76 |
| Conread position: | 124-294 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 75 |
| Conread position: | 125-329 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 54, 37 |
| Conread position: | 127-268 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 127-300 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 46, 72 |
| Conread position: | 127-475 |
| Cow position: | |
| Alignm length: | 360 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 128-267 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 71 |
| Conread position: | 128-279 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 55, 68 |
| Conread position: | 128-301 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 151, 54 |
| Conread position: | 128-318 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 128-389 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 45, 66 |
| Conread position: | 128-407 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 49, 87 |
| Conread position: | 128-407 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 88 |
| Conread position: | 128-407 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 137, 49 |
| Conread position: | 129-266 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 72 |
| Conread position: | 129-505 |
| Cow position: | |
| Alignm length: | 381 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 50, 175 |
| Conread position: | 130-318 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 54, 70 |
| Conread position: | 130-407 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 47, 98 |
| Conread position: | 130-407 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 47, 80 |
| Conread position: | 133-387 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 134-282 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 406-572 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 406-574 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 52, 44 |
| Conread position: | 406-574 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 70, 48 |
Show alignments to all cow chromosomes.