Cow genome map
| Conread name: | Ss1.1-Thy1-THY010205G02.5 |
| Conread position: | 73-269 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 41, 58 |
| Conread position: | 73-407 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 244 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 39, 278 |
| Conread position: | 101-483 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 245 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 79, 22 |
| Conread position: | 105-263 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 24 |
| Conread position: | 105-320 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 75, 24 |
| Conread position: | 105-407 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 107-345 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 23 |
| Conread position: | 108-269 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 24, 95 |
| Conread position: | 108-271 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 32, 96 |
| Conread position: | 108-300 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 15, 89 |
| Conread position: | 108-319 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 72, 24 |
| Conread position: | 108-374 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 69, 88 |
| Conread position: | 109-264 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 90 |
| Conread position: | 109-273 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 22, 127 |
| Conread position: | 109-277 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 94 |
| Conread position: | 109-299 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 56 |
| Conread position: | 109-318 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 109-363 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 22, 113 |
| Conread position: | 109-363 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 205 |
| Conread position: | 109-371 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 109-388 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 140, 68 |
| Conread position: | 109-406 |
| Cow position: | |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 148 |
| Conread position: | 109-418 |
| Cow position: | |
| Alignm length: | 322 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 110 |
| Conread position: | 110-277 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 110-327 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 21, 151 |
| Conread position: | 114-276 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 66, 86 |
| Conread position: | 114-377 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 17, 157 |
| Conread position: | 114-475 |
| Cow position: | |
| Alignm length: | 373 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 65, 83 |
| Conread position: | 116-266 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 15, 91 |
| Conread position: | 116-268 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 78 |
| Conread position: | 116-300 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 63, 83 |
| Conread position: | 116-373 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 12, 87 |
| Conread position: | 117-260 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 117-266 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 117-363 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 64, 12 |
| Conread position: | 117-405 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 12 |
| Conread position: | 117-407 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 137, 12 |
| Conread position: | 117-483 |
| Cow position: | |
| Alignm length: | 371 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 162, 13 |
| Conread position: | 118-363 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 12 |
| Conread position: | 119-318 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 61, 10 |
| Conread position: | 123-253 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 76 |
| Conread position: | 123-264 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 123-265 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 123-268 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 54, 70 |
| Conread position: | 123-300 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 56, 75 |
| Conread position: | 123-300 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 123-482 |
| Cow position: | |
| Alignm length: | 361 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 125, 52 |
| Conread position: | 127-252 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 127-257 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 69 |
| Conread position: | 127-265 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 127-298 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 127-327 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 96, 107 |
| Conread position: | 127-474 |
| Cow position: | |
| Alignm length: | 358 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 69 |
| Conread position: | 128-265 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 48, 72 |
| Conread position: | 128-268 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 129, 49 |
| Conread position: | 128-278 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 128-300 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 128-310 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 67 |
| Conread position: | 128-314 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 125, 68 |
| Conread position: | 128-317 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 129, 49 |
| Conread position: | 128-318 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 54, 75 |
| Conread position: | 128-363 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 119 |
| Conread position: | 128-377 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 120, 29 |
| Conread position: | 128-381 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 209, 49 |
| Conread position: | 128-387 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 163, 88 |
| Conread position: | 128-389 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 51, 187 |
| Conread position: | 128-406 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 163, 49 |
| Conread position: | 129-385 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 59 |
| Conread position: | 130-294 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 48, 74 |
| Conread position: | 130-294 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 49, 69 |
| Conread position: | 130-360 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 49, 115 |
| Conread position: | 130-396 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 49, 108 |
| Conread position: | 132-363 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 145-410 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 32, 14 |
| Conread position: | 146-407 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 178 |
| Conread position: | 184-389 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 77, 36 |
| Conread position: | 250-574 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 15, 74 |
Show alignments to all cow chromosomes.