Cow genome map

Conread name: Ss1.1-Thy1-THY010205G02.5

Conread position: 60-300
Cow position:
Alignm length: 245
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 41

Conread position: 73-295
Cow position:
Alignm length: 232
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 55

Conread position: 73-436
Cow position:
Alignm length: 376
Alignm identity: 251
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 34, 94

Conread position: 74-380
Cow position:
Alignm length: 325
Alignm identity: 217
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 43

Conread position: 101-282
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 101-305
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 48

Conread position: 103-358
Cow position:
Alignm length: 262
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 152, 26

Conread position: 104-257
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 69, 25

Conread position: 105-288
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 156, 24

Conread position: 105-300
Cow position:
Alignm length: 200
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 132

Conread position: 105-343
Cow position:
Alignm length: 246
Alignm identity: 181
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 72, 24

Conread position: 105-363
Cow position:
Alignm length: 268
Alignm identity: 183
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 73, 24

Conread position: 105-366
Cow position:
Alignm length: 263
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 249, 24

Conread position: 105-374
Cow position:
Alignm length: 274
Alignm identity: 187
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 24

Conread position: 105-379
Cow position:
Alignm length: 281
Alignm identity: 187
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 72, 24

Conread position: 105-379
Cow position:
Alignm length: 281
Alignm identity: 192
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 144, 27

Conread position: 105-387
Cow position:
Alignm length: 283
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 105-410
Cow position:
Alignm length: 314
Alignm identity: 224
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 72, 24

Conread position: 105-496
Cow position:
Alignm length: 395
Alignm identity: 256
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 24

Conread position: 106-294
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 23

Conread position: 107-373
Cow position:
Alignm length: 276
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 154, 22

Conread position: 108-255
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 108-261
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 19

Conread position: 108-277
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 93

Conread position: 108-282
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 41

Conread position: 108-294
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 87

Conread position: 108-300
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 155

Conread position: 108-300
Cow position:
Alignm length: 195
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 87, 142

Conread position: 108-363
Cow position:
Alignm length: 267
Alignm identity: 179
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 97

Conread position: 109-258
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 109-264
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 109-318
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 43

Conread position: 109-359
Cow position:
Alignm length: 257
Alignm identity: 186
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 150, 17

Conread position: 109-363
Cow position:
Alignm length: 259
Alignm identity: 173
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 116

Conread position: 109-364
Cow position:
Alignm length: 265
Alignm identity: 188
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 84

Conread position: 109-373
Cow position:
Alignm length: 271
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 93

Conread position: 109-378
Cow position:
Alignm length: 274
Alignm identity: 183
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 89

Conread position: 109-407
Cow position:
Alignm length: 305
Alignm identity: 210
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 25, 58

Conread position: 109-407
Cow position:
Alignm length: 308
Alignm identity: 209
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 22, 42

Conread position: 109-407
Cow position:
Alignm length: 313
Alignm identity: 222
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 113

Conread position: 109-408
Cow position:
Alignm length: 311
Alignm identity: 225
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 72

Conread position: 109-410
Cow position:
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 223

Conread position: 109-437
Cow position:
Alignm length: 336
Alignm identity: 210
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 59

Conread position: 109-483
Cow position:
Alignm length: 394
Alignm identity: 259
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 49

Conread position: 109-574
Cow position:
Alignm length: 487
Alignm identity: 335
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 22, 72

Conread position: 109-574
Cow position:
Alignm length: 476
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 72

Conread position: 110-277
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 30

Conread position: 110-300
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 21, 108

Conread position: 110-300
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 86, 19

Conread position: 110-407
Cow position:
Alignm length: 307
Alignm identity: 225
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 20, 69

Conread position: 110-407
Cow position:
Alignm length: 308
Alignm identity: 208
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 19, 69

Conread position: 110-483
Cow position:
Alignm length: 384
Alignm identity: 255
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 21, 91

Conread position: 110-516
Cow position:
Alignm length: 422
Alignm identity: 281
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 223

Conread position: 114-250
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 114-499
Cow position:
Alignm length: 399
Alignm identity: 265
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 67

Conread position: 116-264
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 83

Conread position: 116-300
Cow position:
Alignm length: 193
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 116-378
Cow position:
Alignm length: 274
Alignm identity: 184
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 90

Conread position: 116-574
Cow position:
Alignm length: 473
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 65

Conread position: 116-574
Cow position:
Alignm length: 484
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 208

Conread position: 117-261
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 10

Conread position: 117-267
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 10

Conread position: 117-271
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 62, 10

Conread position: 117-300
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 64, 13

Conread position: 117-320
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 79

Conread position: 117-357
Cow position:
Alignm length: 248
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 12

Conread position: 117-363
Cow position:
Alignm length: 255
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 12

Conread position: 117-406
Cow position:
Alignm length: 297
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 40

Conread position: 117-515
Cow position:
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 26

Conread position: 117-525
Cow position:
Alignm length: 424
Alignm identity: 270
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 5

Conread position: 118-314
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 68

Conread position: 122-328
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 31

Conread position: 122-400
Cow position:
Alignm length: 282
Alignm identity: 193
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 132, 55

Conread position: 123-377
Cow position:
Alignm length: 261
Alignm identity: 183
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 55

Conread position: 124-407
Cow position:
Alignm length: 292
Alignm identity: 216
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 74

Conread position: 127-261
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 69

Conread position: 127-272
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 72

Conread position: 127-278
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 72

Conread position: 127-300
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 72

Conread position: 127-374
Cow position:
Alignm length: 254
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 72

Conread position: 128-263
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 112

Conread position: 128-267
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 135

Conread position: 128-272
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 13

Conread position: 128-272
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 128-300
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 78

Conread position: 128-300
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 165

Conread position: 128-310
Cow position:
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 74

Conread position: 128-352
Cow position:
Alignm length: 231
Alignm identity: 157
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 73

Conread position: 128-358
Cow position:
Alignm length: 237
Alignm identity: 162
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 90

Conread position: 128-360
Cow position:
Alignm length: 238
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 120, 49

Conread position: 128-363
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 51, 35

Conread position: 128-363
Cow position:
Alignm length: 242
Alignm identity: 165
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 51, 195

Conread position: 128-379
Cow position:
Alignm length: 257
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 77

Conread position: 128-379
Cow position:
Alignm length: 261
Alignm identity: 183
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 51, 137

Conread position: 128-406
Cow position:
Alignm length: 281
Alignm identity: 204
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 126, 49

Conread position: 128-407
Cow position:
Alignm length: 286
Alignm identity: 196
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 127, 49

Conread position: 128-407
Cow position:
Alignm length: 284
Alignm identity: 205
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 49, 87

Conread position: 128-407
Cow position:
Alignm length: 286
Alignm identity: 190
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 163, 49

Conread position: 128-483
Cow position:
Alignm length: 358
Alignm identity: 233
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 121, 59

Conread position: 128-483
Cow position:
Alignm length: 364
Alignm identity: 241
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 56, 184

Conread position: 128-484
Cow position:
Alignm length: 364
Alignm identity: 229
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 72

Conread position: 128-574
Cow position:
Alignm length: 471
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 75

Conread position: 129-268
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 70

Conread position: 129-300
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 64

Conread position: 129-384
Cow position:
Alignm length: 260
Alignm identity: 178
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 166, 42

Conread position: 129-407
Cow position:
Alignm length: 282
Alignm identity: 194
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 166, 42

Conread position: 129-572
Cow position:
Alignm length: 466
Alignm identity: 314
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 44, 18

Conread position: 130-295
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 87

Conread position: 130-299
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 24

Conread position: 130-407
Cow position:
Alignm length: 293
Alignm identity: 216
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 51, 11

Conread position: 130-436
Cow position:
Alignm length: 316
Alignm identity: 206
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 48, 85

Conread position: 132-384
Cow position:
Alignm length: 260
Alignm identity: 177
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 48, 185

Conread position: 133-314
Cow position:
Alignm length: 189
Alignm identity: 145
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 134-278
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 67

Conread position: 135-407
Cow position:
Alignm length: 283
Alignm identity: 196
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 103

Conread position: 138-407
Cow position:
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 199

Conread position: 158-379
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 19, 211

Conread position: 172-389
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 77, 208

Conread position: 199-491
Cow position:
Alignm length: 319
Alignm identity: 227
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 60, 103

Conread position: 263-407
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 56

Conread position: 406-574
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 409-532
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 422-555
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 32

Conread position: 423-576
Cow position:
Alignm length: 162
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 72, 29

Show alignments to all cow chromosomes.