Cow genome map
| Conread name: | Ss1.1-Thy1-THY010205G02.5 |
| Conread position: | 60-300 |
| Cow position: | chr3:78647254-78647494 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 119, 41 |
| Conread position: | 73-295 |
| Cow position: | chr3:44101725-44101949 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 55 |
| Conread position: | 73-436 |
| Cow position: | chr3:77448818-77449182 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 34, 94 |
| Conread position: | 74-380 |
| Cow position: | chr3:58174655-58174972 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 43 |
| Conread position: | 101-282 |
| Cow position: | chr3:41367195-41367017 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 101-305 |
| Cow position: | chr3:18066923-18067126 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 48 |
| Conread position: | 103-358 |
| Cow position: | chr3:58130795-58131042 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 152, 26 |
| Conread position: | 104-257 |
| Cow position: | chr3:34316168-34316013 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 69, 25 |
| Conread position: | 105-288 |
| Cow position: | chr3:56637463-56637645 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 156, 24 |
| Conread position: | 105-300 |
| Cow position: | chr3:31907349-31907151 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 132 |
| Conread position: | 105-343 |
| Cow position: | chr3:48370928-48371165 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 72, 24 |
| Conread position: | 105-363 |
| Cow position: | chr3:36100625-36100889 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 73, 24 |
| Conread position: | 105-366 |
| Cow position: | chr3:10896625-10896877 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 249, 24 |
| Conread position: | 105-374 |
| Cow position: | chr3:51255582-51255841 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 105-379 |
| Cow position: | chr3:15655355-15655079 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 72, 24 |
| Conread position: | 105-379 |
| Cow position: | chr3:15685120-15684855 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 144, 27 |
| Conread position: | 105-387 |
| Cow position: | chr3:53509889-53509619 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 105-410 |
| Cow position: | chr3:42594860-42594554 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 72, 24 |
| Conread position: | 105-496 |
| Cow position: | chr3:23111708-23111343 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 106-294 |
| Cow position: | chr3:8060921-8061103 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 73, 23 |
| Conread position: | 107-373 |
| Cow position: | chr3:66649643-66649375 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 154, 22 |
| Conread position: | 108-255 |
| Cow position: | chr3:66116321-66116168 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 108-261 |
| Cow position: | chr3:68881316-68881162 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 108-277 |
| Cow position: | chr3:29813034-29813208 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 108-282 |
| Cow position: | chr3:76713531-76713354 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 41 |
| Conread position: | 108-294 |
| Cow position: | chr3:48578630-48578815 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 87 |
| Conread position: | 108-300 |
| Cow position: | chr3:2198673-2198871 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 155 |
| Conread position: | 108-300 |
| Cow position: | chr3:57624258-57624450 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 87, 142 |
| Conread position: | 108-363 |
| Cow position: | chr3:74878799-74878537 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 97 |
| Conread position: | 109-258 |
| Cow position: | chr3:33327496-33327651 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 109-264 |
| Cow position: | chr3:32399462-32399303 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 109-318 |
| Cow position: | chr3:14625595-14625384 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 109-359 |
| Cow position: | chr3:82703325-82703575 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 150, 17 |
| Conread position: | 109-363 |
| Cow position: | chr3:20471568-20471313 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 116 |
| Conread position: | 109-364 |
| Cow position: | chr3:11326561-11326308 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 109-373 |
| Cow position: | chr3:26553920-26553654 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 64, 93 |
| Conread position: | 109-378 |
| Cow position: | chr3:20437854-20437590 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 64, 89 |
| Conread position: | 109-407 |
| Cow position: | chr3:51598175-51598466 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 25, 58 |
| Conread position: | 109-407 |
| Cow position: | chr3:52722207-52721914 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 109-407 |
| Cow position: | chr3:55445155-55445460 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 22, 113 |
| Conread position: | 109-408 |
| Cow position: | chr3:67044305-67044003 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 109-410 |
| Cow position: | chr3:42489518-42489203 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 223 |
| Conread position: | 109-437 |
| Cow position: | chr3:35511579-35511910 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 109-483 |
| Cow position: | chr3:54881548-54881933 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 109-574 |
| Cow position: | chr3:31287305-31286848 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 335 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 109-574 |
| Cow position: | chr3:84153117-84153580 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 110-277 |
| Cow position: | chr3:82460974-82461142 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 110-300 |
| Cow position: | chr3:45691076-45690882 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 21, 108 |
| Conread position: | 110-300 |
| Cow position: | chr3:83442853-83442666 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 86, 19 |
| Conread position: | 110-407 |
| Cow position: | chr3:23478029-23478322 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 20, 69 |
| Conread position: | 110-407 |
| Cow position: | chr3:80084383-80084083 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 19, 69 |
| Conread position: | 110-483 |
| Cow position: | chr3:50614432-50614800 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 21, 91 |
| Conread position: | 110-516 |
| Cow position: | chr3:41718181-41718582 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 21, 223 |
| Conread position: | 114-250 |
| Cow position: | chr3:22170987-22171125 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 114-499 |
| Cow position: | chr3:49337524-49337907 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 17, 67 |
| Conread position: | 116-264 |
| Cow position: | chr3:69849703-69849554 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 83 |
| Conread position: | 116-300 |
| Cow position: | chr3:37451869-37452061 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 116-378 |
| Cow position: | chr3:5097003-5097273 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 116-574 |
| Cow position: | chr3:24531631-24532087 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 65 |
| Conread position: | 116-574 |
| Cow position: | chr3:56711841-56711363 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 208 |
| Conread position: | 117-261 |
| Cow position: | chr3:2506672-2506528 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 117-267 |
| Cow position: | chr3:70609431-70609579 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 10 |
| Conread position: | 117-271 |
| Cow position: | chr3:53790732-53790578 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 62, 10 |
| Conread position: | 117-300 |
| Cow position: | chr3:21693750-21693935 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 64, 13 |
| Conread position: | 117-320 |
| Cow position: | chr3:72675896-72676098 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 79 |
| Conread position: | 117-357 |
| Cow position: | chr3:53588582-53588338 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 12 |
| Conread position: | 117-363 |
| Cow position: | chr3:55992062-55991816 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 12 |
| Conread position: | 117-406 |
| Cow position: | chr3:80929139-80928848 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 40 |
| Conread position: | 117-515 |
| Cow position: | chr3:19689850-19689427 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 26 |
| Conread position: | 117-525 |
| Cow position: | chr3:27274334-27274741 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 5 |
| Conread position: | 118-314 |
| Cow position: | chr3:50347771-50347967 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 68 |
| Conread position: | 122-328 |
| Cow position: | chr3:78530347-78530553 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 73, 31 |
| Conread position: | 122-400 |
| Cow position: | chr3:39554512-39554246 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 132, 55 |
| Conread position: | 123-377 |
| Cow position: | chr3:58350395-58350637 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 124-407 |
| Cow position: | chr3:3690913-3690633 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 38, 74 |
| Conread position: | 127-261 |
| Cow position: | chr3:70565924-70565790 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 52, 69 |
| Conread position: | 127-272 |
| Cow position: | chr3:54945942-54946090 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 127-278 |
| Cow position: | chr3:44932326-44932475 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 127-300 |
| Cow position: | chr3:9641379-9641555 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 127-374 |
| Cow position: | chr3:23169252-23169004 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 128-263 |
| Cow position: | chr3:4082280-4082143 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 112 |
| Conread position: | 128-267 |
| Cow position: | chr3:16809972-16809830 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 135 |
| Conread position: | 128-272 |
| Cow position: | chr3:13302033-13301891 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 128-272 |
| Cow position: | chr3:43657892-43657745 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 128-300 |
| Cow position: | chr3:8790776-8790606 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 45, 78 |
| Conread position: | 128-300 |
| Cow position: | chr3:54862604-54862424 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 165 |
| Conread position: | 128-310 |
| Cow position: | chr3:63861082-63860892 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 128-352 |
| Cow position: | chr3:26960776-26960548 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 53, 73 |
| Conread position: | 128-358 |
| Cow position: | chr3:5420047-5419817 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 49, 90 |
| Conread position: | 128-360 |
| Cow position: | chr3:55777852-55778085 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 120, 49 |
| Conread position: | 128-363 |
| Cow position: | chr3:8457474-8457706 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 51, 35 |
| Conread position: | 128-363 |
| Cow position: | chr3:27532843-27532603 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 51, 195 |
| Conread position: | 128-379 |
| Cow position: | chr3:12255293-12255545 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 77 |
| Conread position: | 128-379 |
| Cow position: | chr3:66708257-66708000 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 51, 137 |
| Conread position: | 128-406 |
| Cow position: | chr3:73417339-73417609 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 126, 49 |
| Conread position: | 128-407 |
| Cow position: | chr3:2226906-2227176 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 127, 49 |
| Conread position: | 128-407 |
| Cow position: | chr3:55460681-55460404 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 49, 87 |
| Conread position: | 128-407 |
| Cow position: | chr3:58206633-58206355 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 163, 49 |
| Conread position: | 128-483 |
| Cow position: | chr3:8923862-8924199 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 121, 59 |
| Conread position: | 128-483 |
| Cow position: | chr3:23092164-23091820 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 56, 184 |
| Conread position: | 128-484 |
| Cow position: | chr3:64281117-64280760 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 128-574 |
| Cow position: | chr3:8753284-8753735 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 75 |
| Conread position: | 129-268 |
| Cow position: | chr3:69750885-69750746 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 70 |
| Conread position: | 129-300 |
| Cow position: | chr3:59206060-59206231 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 49, 64 |
| Conread position: | 129-384 |
| Cow position: | chr3:11357827-11357582 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 166, 42 |
| Conread position: | 129-407 |
| Cow position: | chr3:11422564-11422828 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 166, 42 |
| Conread position: | 129-572 |
| Cow position: | chr3:60855022-60854574 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 314 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 130-295 |
| Cow position: | chr3:23944916-23945083 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 87 |
| Conread position: | 130-299 |
| Cow position: | chr3:81473826-81473999 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 47, 24 |
| Conread position: | 130-407 |
| Cow position: | chr3:77467753-77468043 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 130-436 |
| Cow position: | chr3:40345221-40345533 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 48, 85 |
| Conread position: | 132-384 |
| Cow position: | chr3:35278389-35278643 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 48, 185 |
| Conread position: | 133-314 |
| Cow position: | chr3:42490649-42490461 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 134-278 |
| Cow position: | chr3:76922842-76922695 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 67 |
| Conread position: | 135-407 |
| Cow position: | chr3:64688386-64688107 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 103 |
| Conread position: | 138-407 |
| Cow position: | chr3:27634189-27633919 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 199 |
| Conread position: | 158-379 |
| Cow position: | chr3:48629749-48629522 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 19, 211 |
| Conread position: | 172-389 |
| Cow position: | chr3:6799118-6798888 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 77, 208 |
| Conread position: | 199-491 |
| Cow position: | chr3:27347444-27347130 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 60, 103 |
| Conread position: | 263-407 |
| Cow position: | chr3:45735089-45735234 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 56 |
| Conread position: | 406-574 |
| Cow position: | chr3:56042608-56042443 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 409-532 |
| Cow position: | chr3:23478348-23478466 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 422-555 |
| Cow position: | chr3:45735271-45735407 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 32 |
| Conread position: | 423-576 |
| Cow position: | chr3:36538808-36538649 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 72, 29 |
Show alignments to all cow chromosomes.