Cow genome map

Conread name: Ss1.1-Thy1-THY010205G02.5

Conread position: 56-293
Cow position:
Alignm length: 240
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 52, 74

Conread position: 73-266
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 73-268
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 36

Conread position: 92-292
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 39

Conread position: 98-398
Cow position:
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 56

Conread position: 101-269
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 75, 26

Conread position: 102-267
Cow position:
Alignm length: 168
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 157, 27

Conread position: 105-255
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 24

Conread position: 105-267
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 86, 24

Conread position: 105-282
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 75, 24

Conread position: 105-488
Cow position:
Alignm length: 397
Alignm identity: 256
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 73, 24

Conread position: 105-536
Cow position:
Alignm length: 457
Alignm identity: 310
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 144, 24

Conread position: 106-299
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 107-277
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 151, 22

Conread position: 107-296
Cow position:
Alignm length: 192
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 22

Conread position: 108-276
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 23, 95

Conread position: 108-363
Cow position:
Alignm length: 262
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 88

Conread position: 108-401
Cow position:
Alignm length: 304
Alignm identity: 203
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 91

Conread position: 108-482
Cow position:
Alignm length: 384
Alignm identity: 243
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 94

Conread position: 109-270
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 14

Conread position: 109-274
Cow position:
Alignm length: 171
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 74

Conread position: 109-276
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 100

Conread position: 109-276
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 152

Conread position: 109-384
Cow position:
Alignm length: 282
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 92

Conread position: 109-389
Cow position:
Alignm length: 300
Alignm identity: 211
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 153

Conread position: 109-407
Cow position:
Alignm length: 313
Alignm identity: 215
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 22, 57

Conread position: 109-407
Cow position:
Alignm length: 306
Alignm identity: 213
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 70

Conread position: 109-407
Cow position:
Alignm length: 317
Alignm identity: 215
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 32, 36

Conread position: 109-407
Cow position:
Alignm length: 305
Alignm identity: 209
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 173, 9

Conread position: 109-410
Cow position:
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 72

Conread position: 110-303
Cow position:
Alignm length: 195
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 87

Conread position: 111-273
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 68

Conread position: 111-313
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 18, 41

Conread position: 114-300
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 87

Conread position: 116-300
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 94

Conread position: 117-257
Cow position:
Alignm length: 142
Alignm identity: 113
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 132, 12

Conread position: 117-272
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 62, 10

Conread position: 117-273
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 59, 10

Conread position: 117-316
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 5

Conread position: 117-363
Cow position:
Alignm length: 255
Alignm identity: 176
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 12

Conread position: 117-377
Cow position:
Alignm length: 268
Alignm identity: 174
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 12

Conread position: 117-407
Cow position:
Alignm length: 299
Alignm identity: 213
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 9, 77

Conread position: 117-411
Cow position:
Alignm length: 302
Alignm identity: 214
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 12

Conread position: 117-475
Cow position:
Alignm length: 373
Alignm identity: 235
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 174, 12

Conread position: 119-319
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 83

Conread position: 122-274
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 96

Conread position: 122-483
Cow position:
Alignm length: 371
Alignm identity: 245
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 73

Conread position: 123-300
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 52, 95

Conread position: 123-300
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 78

Conread position: 123-327
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 38

Conread position: 123-406
Cow position:
Alignm length: 294
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 54, 99

Conread position: 123-407
Cow position:
Alignm length: 290
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 59

Conread position: 123-477
Cow position:
Alignm length: 363
Alignm identity: 235
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 192

Conread position: 123-502
Cow position:
Alignm length: 393
Alignm identity: 261
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 168, 59

Conread position: 123-510
Cow position:
Alignm length: 397
Alignm identity: 263
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 50, 28

Conread position: 126-407
Cow position:
Alignm length: 282
Alignm identity: 198
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 127-261
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 72

Conread position: 127-264
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 79

Conread position: 127-266
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 73

Conread position: 127-268
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 71

Conread position: 127-268
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 78

Conread position: 127-269
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 72

Conread position: 127-284
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 72

Conread position: 127-292
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 34

Conread position: 127-300
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 143, 59

Conread position: 127-318
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 52, 72

Conread position: 127-475
Cow position:
Alignm length: 359
Alignm identity: 231
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 72

Conread position: 128-228
Cow position:
Alignm length: 103
Alignm identity: 88
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 128-231
Cow position:
Alignm length: 108
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 128-254
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 128-263
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 70

Conread position: 128-276
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 73

Conread position: 128-297
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 51, 19

Conread position: 128-300
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 128-300
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 49

Conread position: 128-314
Cow position:
Alignm length: 193
Alignm identity: 154
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 45, 90

Conread position: 128-350
Cow position:
Alignm length: 227
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 147

Conread position: 128-350
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 134, 49

Conread position: 128-374
Cow position:
Alignm length: 250
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 72

Conread position: 128-387
Cow position:
Alignm length: 272
Alignm identity: 206
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 47, 183

Conread position: 128-388
Cow position:
Alignm length: 265
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 167, 16

Conread position: 128-407
Cow position:
Alignm length: 292
Alignm identity: 205
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 86, 49

Conread position: 128-407
Cow position:
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 37

Conread position: 128-407
Cow position:
Alignm length: 291
Alignm identity: 213
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 56, 185

Conread position: 128-508
Cow position:
Alignm length: 387
Alignm identity: 253
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 49, 64

Conread position: 129-316
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 182

Conread position: 129-323
Cow position:
Alignm length: 201
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 129-406
Cow position:
Alignm length: 284
Alignm identity: 207
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 132, 48

Conread position: 129-473
Cow position:
Alignm length: 352
Alignm identity: 232
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 12

Conread position: 130-259
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 75

Conread position: 130-267
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 75

Conread position: 130-295
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 131, 52

Conread position: 130-300
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 67

Conread position: 130-475
Cow position:
Alignm length: 357
Alignm identity: 226
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 70

Conread position: 132-299
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 45

Conread position: 133-407
Cow position:
Alignm length: 281
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 189

Conread position: 138-380
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 122, 69

Conread position: 148-363
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 13

Conread position: 150-407
Cow position:
Alignm length: 264
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 109, 43

Conread position: 153-379
Cow position:
Alignm length: 231
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 39

Conread position: 172-407
Cow position:
Alignm length: 240
Alignm identity: 171
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 76, 151

Conread position: 178-407
Cow position:
Alignm length: 237
Alignm identity: 178
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 52, 17

Conread position: 182-483
Cow position:
Alignm length: 323
Alignm identity: 230
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 85, 31

Conread position: 182-574
Cow position:
Alignm length: 411
Alignm identity: 272
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 113, 124

Conread position: 183-404
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 154, 67

Conread position: 196-407
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 20

Conread position: 203-407
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 62, 119

Conread position: 203-407
Cow position:
Alignm length: 210
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 74

Conread position: 247-503
Cow position:
Alignm length: 259
Alignm identity: 167
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 72

Conread position: 250-572
Cow position:
Alignm length: 342
Alignm identity: 236
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 7

Conread position: 406-573
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 126, 46

Conread position: 406-574
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 131, 46

Conread position: 420-574
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 32

Conread position: 422-574
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 12

Show alignments to all cow chromosomes.