Cow genome map
| Conread name: | Ss1.1-Thy1-THY010205G02.5 |
| Conread position: | 56-293 |
| Cow position: | chr5:37068687-37068920 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 52, 74 |
| Conread position: | 73-266 |
| Cow position: | chr5:33265637-33265456 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 73-268 |
| Cow position: | chr5:7921587-7921395 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 106, 36 |
| Conread position: | 92-292 |
| Cow position: | chr5:66831886-66831682 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 98-398 |
| Cow position: | chr5:34167790-34168099 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 56 |
| Conread position: | 101-269 |
| Cow position: | chr5:53835552-53835719 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 75, 26 |
| Conread position: | 102-267 |
| Cow position: | chr5:73526219-73526385 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 157, 27 |
| Conread position: | 105-255 |
| Cow position: | chr5:6987004-6987155 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 105-267 |
| Cow position: | chr5:59356832-59356995 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 86, 24 |
| Conread position: | 105-282 |
| Cow position: | chr5:9083181-9083357 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 75, 24 |
| Conread position: | 105-488 |
| Cow position: | chr5:48143945-48143557 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 256 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 73, 24 |
| Conread position: | 105-536 |
| Cow position: | chr5:26561999-26562442 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 310 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 144, 24 |
| Conread position: | 106-299 |
| Cow position: | chr5:35209639-35209438 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 107-277 |
| Cow position: | chr5:53146039-53145870 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 151, 22 |
| Conread position: | 107-296 |
| Cow position: | chr5:65776538-65776349 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 22 |
| Conread position: | 108-276 |
| Cow position: | chr5:8994726-8994557 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 23, 95 |
| Conread position: | 108-363 |
| Cow position: | chr5:29827893-29828149 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 65, 88 |
| Conread position: | 108-401 |
| Cow position: | chr5:65588547-65588840 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 91 |
| Conread position: | 108-482 |
| Cow position: | chr5:30302735-30303108 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 94 |
| Conread position: | 109-270 |
| Cow position: | chr5:33467195-33467036 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 14 |
| Conread position: | 109-274 |
| Cow position: | chr5:34232587-34232751 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 109-276 |
| Cow position: | chr5:1950221-1950048 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 100 |
| Conread position: | 109-276 |
| Cow position: | chr5:27615356-27615528 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 152 |
| Conread position: | 109-384 |
| Cow position: | chr5:52645235-52644957 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 92 |
| Conread position: | 109-389 |
| Cow position: | chr5:23234298-23234594 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 153 |
| Conread position: | 109-407 |
| Cow position: | chr5:14832768-14832470 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 22, 57 |
| Conread position: | 109-407 |
| Cow position: | chr5:23647168-23646872 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 109-407 |
| Cow position: | chr5:31913183-31913488 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 32, 36 |
| Conread position: | 109-407 |
| Cow position: | chr5:63173830-63173536 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 173, 9 |
| Conread position: | 109-410 |
| Cow position: | chr5:51076803-51076497 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 110-303 |
| Cow position: | chr5:53842130-53842322 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 87 |
| Conread position: | 111-273 |
| Cow position: | chr5:3824939-3825097 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 111-313 |
| Cow position: | chr5:74358756-74358550 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 114-300 |
| Cow position: | chr5:24348957-24349145 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 87 |
| Conread position: | 116-300 |
| Cow position: | chr5:34638733-34638922 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 94 |
| Conread position: | 117-257 |
| Cow position: | chr5:34678750-34678887 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 132, 12 |
| Conread position: | 117-272 |
| Cow position: | chr5:57935255-57935099 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 62, 10 |
| Conread position: | 117-273 |
| Cow position: | chr5:14314379-14314534 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 59, 10 |
| Conread position: | 117-316 |
| Cow position: | chr5:55176744-55176947 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 5 |
| Conread position: | 117-363 |
| Cow position: | chr5:39442151-39442399 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 12 |
| Conread position: | 117-377 |
| Cow position: | chr5:58748620-58748884 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 12 |
| Conread position: | 117-407 |
| Cow position: | chr5:23753365-23753077 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 9, 77 |
| Conread position: | 117-411 |
| Cow position: | chr5:54111776-54112063 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 60, 12 |
| Conread position: | 117-475 |
| Cow position: | chr5:55955763-55956130 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 174, 12 |
| Conread position: | 119-319 |
| Cow position: | chr5:3242623-3242422 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 83 |
| Conread position: | 122-274 |
| Cow position: | chr5:66281269-66281417 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 96 |
| Conread position: | 122-483 |
| Cow position: | chr5:17027952-17028305 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 73 |
| Conread position: | 123-300 |
| Cow position: | chr5:39182052-39181874 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 52, 95 |
| Conread position: | 123-300 |
| Cow position: | chr5:45940753-45940571 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 55, 78 |
| Conread position: | 123-327 |
| Cow position: | chr5:26099512-26099315 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 38 |
| Conread position: | 123-406 |
| Cow position: | chr5:25927835-25927551 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 54, 99 |
| Conread position: | 123-407 |
| Cow position: | chr5:48224716-48224437 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 59 |
| Conread position: | 123-477 |
| Cow position: | chr5:1343996-1343653 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 50, 192 |
| Conread position: | 123-502 |
| Cow position: | chr5:50900763-50901146 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 261 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 168, 59 |
| Conread position: | 123-510 |
| Cow position: | chr5:25900011-25899639 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 50, 28 |
| Conread position: | 126-407 |
| Cow position: | chr5:45912419-45912154 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 127-261 |
| Cow position: | chr5:46512900-46512764 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 127-264 |
| Cow position: | chr5:6086695-6086557 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 127-266 |
| Cow position: | chr5:56070719-56070859 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 73 |
| Conread position: | 127-268 |
| Cow position: | chr5:64321616-64321759 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 57, 71 |
| Conread position: | 127-268 |
| Cow position: | chr5:70952013-70951871 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 78 |
| Conread position: | 127-269 |
| Cow position: | chr5:55967016-55966875 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 127-284 |
| Cow position: | chr5:6045154-6045310 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 56, 72 |
| Conread position: | 127-292 |
| Cow position: | chr5:5111210-5111047 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 54, 34 |
| Conread position: | 127-300 |
| Cow position: | chr5:41546026-41545855 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 143, 59 |
| Conread position: | 127-318 |
| Cow position: | chr5:50821645-50821839 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 127-475 |
| Cow position: | chr5:30276560-30276907 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 128-228 |
| Cow position: | chr5:54156627-54156729 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 128-231 |
| Cow position: | chr5:14512979-14513086 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 128-254 |
| Cow position: | chr5:72891889-72891766 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 128-263 |
| Cow position: | chr5:31144923-31144789 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 70 |
| Conread position: | 128-276 |
| Cow position: | chr5:52165315-52165165 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 51, 73 |
| Conread position: | 128-297 |
| Cow position: | chr5:40039903-40039733 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 51, 19 |
| Conread position: | 128-300 |
| Cow position: | chr5:37714034-37713856 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 128-300 |
| Cow position: | chr5:41636734-41636910 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 49 |
| Conread position: | 128-314 |
| Cow position: | chr5:27492345-27492535 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 45, 90 |
| Conread position: | 128-350 |
| Cow position: | chr5:9234213-9233997 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 48, 147 |
| Conread position: | 128-350 |
| Cow position: | chr5:57126882-57127102 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 134, 49 |
| Conread position: | 128-374 |
| Cow position: | chr5:52000086-52000330 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 128-387 |
| Cow position: | chr5:15882608-15882342 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 206 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 47, 183 |
| Conread position: | 128-388 |
| Cow position: | chr5:21167259-21167006 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 167, 16 |
| Conread position: | 128-407 |
| Cow position: | chr5:25225783-25225496 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 86, 49 |
| Conread position: | 128-407 |
| Cow position: | chr5:51952242-51952524 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 37 |
| Conread position: | 128-407 |
| Cow position: | chr5:61030361-61030073 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 56, 185 |
| Conread position: | 128-508 |
| Cow position: | chr5:39695517-39695884 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 253 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 49, 64 |
| Conread position: | 129-316 |
| Cow position: | chr5:65924831-65924638 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 48, 182 |
| Conread position: | 129-323 |
| Cow position: | chr5:22934588-22934388 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 129-406 |
| Cow position: | chr5:37425611-37425887 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 132, 48 |
| Conread position: | 129-473 |
| Cow position: | chr5:47696574-47696242 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 12 |
| Conread position: | 130-259 |
| Cow position: | chr5:44447002-44446872 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 75 |
| Conread position: | 130-267 |
| Cow position: | chr5:7044841-7044702 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 49, 75 |
| Conread position: | 130-295 |
| Cow position: | chr5:27690191-27690025 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 131, 52 |
| Conread position: | 130-300 |
| Cow position: | chr5:56433670-56433839 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 130-475 |
| Cow position: | chr5:21828732-21829084 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 132-299 |
| Cow position: | chr5:4630991-4631158 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 124, 45 |
| Conread position: | 133-407 |
| Cow position: | chr5:34483666-34483388 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 189 |
| Conread position: | 138-380 |
| Cow position: | chr5:27904289-27904527 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 122, 69 |
| Conread position: | 148-363 |
| Cow position: | chr5:54375621-54375400 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 150-407 |
| Cow position: | chr5:70404222-70404476 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 109, 43 |
| Conread position: | 153-379 |
| Cow position: | chr5:48573875-48573659 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 172-407 |
| Cow position: | chr5:37047958-37048195 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 76, 151 |
| Conread position: | 178-407 |
| Cow position: | chr5:60968321-60968553 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 52, 17 |
| Conread position: | 182-483 |
| Cow position: | chr5:19300506-19300200 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 85, 31 |
| Conread position: | 182-574 |
| Cow position: | chr5:1305314-1304912 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 113, 124 |
| Conread position: | 183-404 |
| Cow position: | chr5:70128075-70128282 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 154, 67 |
| Conread position: | 196-407 |
| Cow position: | chr5:40270960-40271172 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 20 |
| Conread position: | 203-407 |
| Cow position: | chr5:59072962-59073170 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 62, 119 |
| Conread position: | 203-407 |
| Cow position: | chr5:63159985-63160193 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 89, 74 |
| Conread position: | 247-503 |
| Cow position: | chr5:33986202-33985947 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 250-572 |
| Cow position: | chr5:21146243-21145913 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 45, 7 |
| Conread position: | 406-573 |
| Cow position: | chr5:21166892-21166729 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 126, 46 |
| Conread position: | 406-574 |
| Cow position: | chr5:57127608-57127774 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 131, 46 |
| Conread position: | 420-574 |
| Cow position: | chr5:10786053-10785896 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 112, 32 |
| Conread position: | 422-574 |
| Cow position: | chr5:56825959-56826119 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 12 |
Show alignments to all cow chromosomes.