Cow genome map

Conread name: Ss1.1-Thy1-THY010205G02.5

Conread position: 44-345
Cow position:
Alignm length: 319
Alignm identity: 225
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 57, 13

Conread position: 73-261
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 132

Conread position: 73-374
Cow position:
Alignm length: 307
Alignm identity: 209
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 174, 33

Conread position: 73-377
Cow position:
Alignm length: 318
Alignm identity: 220
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 145

Conread position: 73-407
Cow position:
Alignm length: 351
Alignm identity: 244
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 136

Conread position: 73-483
Cow position:
Alignm length: 427
Alignm identity: 286
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 34, 64

Conread position: 74-475
Cow position:
Alignm length: 414
Alignm identity: 263
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 28

Conread position: 93-294
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 37

Conread position: 98-279
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 31

Conread position: 103-407
Cow position:
Alignm length: 316
Alignm identity: 219
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 132, 28

Conread position: 105-259
Cow position:
Alignm length: 157
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 105-263
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 24

Conread position: 105-300
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 74, 21

Conread position: 105-300
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 74, 21

Conread position: 105-314
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 74, 24

Conread position: 105-318
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 22

Conread position: 105-343
Cow position:
Alignm length: 248
Alignm identity: 168
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 25

Conread position: 105-366
Cow position:
Alignm length: 266
Alignm identity: 177
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 90, 24

Conread position: 105-379
Cow position:
Alignm length: 276
Alignm identity: 182
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 222, 22

Conread position: 105-385
Cow position:
Alignm length: 283
Alignm identity: 189
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 24

Conread position: 105-403
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 155, 24

Conread position: 105-404
Cow position:
Alignm length: 305
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 150, 24

Conread position: 105-407
Cow position:
Alignm length: 306
Alignm identity: 218
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 156, 24

Conread position: 105-410
Cow position:
Alignm length: 315
Alignm identity: 218
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 186, 30

Conread position: 108-262
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 32

Conread position: 108-265
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 19

Conread position: 108-270
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 30

Conread position: 108-278
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 23, 99

Conread position: 108-297
Cow position:
Alignm length: 199
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 93

Conread position: 108-319
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 95

Conread position: 108-366
Cow position:
Alignm length: 266
Alignm identity: 176
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 33

Conread position: 108-394
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 149, 69

Conread position: 108-407
Cow position:
Alignm length: 309
Alignm identity: 222
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 152, 22

Conread position: 109-254
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 109-264
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 109-298
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 109-300
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 139, 44

Conread position: 109-319
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 65

Conread position: 109-321
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 65, 90

Conread position: 109-325
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 96

Conread position: 109-360
Cow position:
Alignm length: 259
Alignm identity: 177
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 29, 140

Conread position: 109-363
Cow position:
Alignm length: 263
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 85

Conread position: 109-381
Cow position:
Alignm length: 284
Alignm identity: 193
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 20, 119

Conread position: 109-388
Cow position:
Alignm length: 291
Alignm identity: 206
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 22, 136

Conread position: 109-407
Cow position:
Alignm length: 319
Alignm identity: 226
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 89

Conread position: 109-407
Cow position:
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 66

Conread position: 109-408
Cow position:
Alignm length: 302
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 68

Conread position: 110-275
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 88

Conread position: 110-360
Cow position:
Alignm length: 260
Alignm identity: 176
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 180

Conread position: 110-377
Cow position:
Alignm length: 268
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 111-283
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 147

Conread position: 114-293
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 67

Conread position: 116-266
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 27

Conread position: 116-363
Cow position:
Alignm length: 253
Alignm identity: 168
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 146, 14

Conread position: 116-374
Cow position:
Alignm length: 270
Alignm identity: 184
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 89

Conread position: 117-298
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 88

Conread position: 117-360
Cow position:
Alignm length: 245
Alignm identity: 170
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 62, 12

Conread position: 117-363
Cow position:
Alignm length: 252
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 13

Conread position: 117-407
Cow position:
Alignm length: 294
Alignm identity: 194
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 174, 13

Conread position: 117-407
Cow position:
Alignm length: 297
Alignm identity: 216
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 38, 21

Conread position: 117-415
Cow position:
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 207

Conread position: 119-318
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 25

Conread position: 122-378
Cow position:
Alignm length: 261
Alignm identity: 171
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 76

Conread position: 123-300
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 73

Conread position: 123-314
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 64

Conread position: 123-379
Cow position:
Alignm length: 264
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 247

Conread position: 123-380
Cow position:
Alignm length: 262
Alignm identity: 176
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 136, 67

Conread position: 123-482
Cow position:
Alignm length: 365
Alignm identity: 239
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 138, 66

Conread position: 125-574
Cow position:
Alignm length: 480
Alignm identity: 333
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 28, 5

Conread position: 127-268
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 78

Conread position: 127-271
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 79

Conread position: 127-271
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 72

Conread position: 127-271
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 127-279
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 49, 78

Conread position: 127-299
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 73

Conread position: 127-300
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 73

Conread position: 127-360
Cow position:
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 146, 50

Conread position: 127-407
Cow position:
Alignm length: 283
Alignm identity: 198
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 168, 44

Conread position: 128-267
Cow position:
Alignm length: 142
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 68

Conread position: 128-267
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 74

Conread position: 128-275
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 133, 51

Conread position: 128-277
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 72

Conread position: 128-299
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 122

Conread position: 128-300
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 73

Conread position: 128-307
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 130

Conread position: 128-318
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 53, 73

Conread position: 128-343
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 51, 120

Conread position: 128-360
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 187

Conread position: 128-363
Cow position:
Alignm length: 239
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 88

Conread position: 128-366
Cow position:
Alignm length: 244
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 128-377
Cow position:
Alignm length: 253
Alignm identity: 174
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 126

Conread position: 128-379
Cow position:
Alignm length: 256
Alignm identity: 174
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 130, 49

Conread position: 128-384
Cow position:
Alignm length: 263
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 66

Conread position: 128-387
Cow position:
Alignm length: 267
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 130, 47

Conread position: 128-388
Cow position:
Alignm length: 267
Alignm identity: 178
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 65

Conread position: 128-402
Cow position:
Alignm length: 283
Alignm identity: 206
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 121, 49

Conread position: 128-406
Cow position:
Alignm length: 281
Alignm identity: 198
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 208, 49

Conread position: 128-406
Cow position:
Alignm length: 293
Alignm identity: 208
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 55, 114

Conread position: 128-407
Cow position:
Alignm length: 286
Alignm identity: 199
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 58

Conread position: 128-407
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 120, 48

Conread position: 129-380
Cow position:
Alignm length: 257
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 19

Conread position: 129-407
Cow position:
Alignm length: 286
Alignm identity: 206
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 49, 79

Conread position: 129-436
Cow position:
Alignm length: 316
Alignm identity: 213
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 65

Conread position: 129-574
Cow position:
Alignm length: 470
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 191

Conread position: 130-260
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 49, 69

Conread position: 130-355
Cow position:
Alignm length: 234
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 93

Conread position: 131-375
Cow position:
Alignm length: 261
Alignm identity: 181
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 37

Conread position: 132-407
Cow position:
Alignm length: 280
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 112, 45

Conread position: 133-406
Cow position:
Alignm length: 282
Alignm identity: 208
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 41, 61

Conread position: 138-318
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 117, 54

Conread position: 138-386
Cow position:
Alignm length: 254
Alignm identity: 169
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 18

Conread position: 142-380
Cow position:
Alignm length: 246
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 64

Conread position: 145-314
Cow position:
Alignm length: 173
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 55

Conread position: 146-576
Cow position:
Alignm length: 457
Alignm identity: 309
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 114, 31

Conread position: 150-327
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 27

Conread position: 162-402
Cow position:
Alignm length: 249
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 182-407
Cow position:
Alignm length: 235
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 98

Conread position: 191-574
Cow position:
Alignm length: 398
Alignm identity: 263
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 64, 19

Conread position: 406-574
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 406-574
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 409-574
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 122, 43

Show alignments to all cow chromosomes.