Cow genome map

Conread name: Ss1.1-Thy1-THY010205G02.5

Conread position: 44-407
Cow position:
Alignm length: 369
Alignm identity: 241
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 84, 65

Conread position: 45-403
Cow position:
Alignm length: 370
Alignm identity: 240
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 89

Conread position: 73-299
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 36

Conread position: 73-378
Cow position:
Alignm length: 312
Alignm identity: 219
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 31, 58

Conread position: 93-300
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 35

Conread position: 98-247
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 83, 31

Conread position: 101-277
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 78, 25

Conread position: 101-295
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 25

Conread position: 101-300
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 22

Conread position: 101-484
Cow position:
Alignm length: 398
Alignm identity: 268
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 240, 31

Conread position: 102-574
Cow position:
Alignm length: 492
Alignm identity: 323
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 77, 43

Conread position: 105-257
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 24

Conread position: 105-319
Cow position:
Alignm length: 219
Alignm identity: 147
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 144, 22

Conread position: 105-319
Cow position:
Alignm length: 220
Alignm identity: 151
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 24

Conread position: 105-361
Cow position:
Alignm length: 266
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 68, 202

Conread position: 105-379
Cow position:
Alignm length: 282
Alignm identity: 190
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 144, 24

Conread position: 105-379
Cow position:
Alignm length: 281
Alignm identity: 194
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 147, 24

Conread position: 105-388
Cow position:
Alignm length: 289
Alignm identity: 206
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 144, 25

Conread position: 105-389
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 123, 25

Conread position: 106-482
Cow position:
Alignm length: 387
Alignm identity: 255
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 73

Conread position: 107-267
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 72, 20

Conread position: 107-277
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 22

Conread position: 107-300
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 108-272
Cow position:
Alignm length: 167
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 19

Conread position: 108-273
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 100

Conread position: 108-291
Cow position:
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 15

Conread position: 108-314
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 71

Conread position: 108-377
Cow position:
Alignm length: 272
Alignm identity: 187
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 70

Conread position: 109-254
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 94

Conread position: 109-294
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 102

Conread position: 109-300
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 72

Conread position: 109-363
Cow position:
Alignm length: 262
Alignm identity: 176
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 92

Conread position: 109-363
Cow position:
Alignm length: 261
Alignm identity: 180
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 68

Conread position: 109-388
Cow position:
Alignm length: 283
Alignm identity: 183
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 7

Conread position: 109-389
Cow position:
Alignm length: 290
Alignm identity: 212
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 103

Conread position: 109-406
Cow position:
Alignm length: 306
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 25

Conread position: 109-407
Cow position:
Alignm length: 305
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 72

Conread position: 110-300
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 95

Conread position: 110-318
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 21, 84

Conread position: 110-389
Cow position:
Alignm length: 292
Alignm identity: 205
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 71

Conread position: 111-364
Cow position:
Alignm length: 268
Alignm identity: 188
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 72

Conread position: 111-405
Cow position:
Alignm length: 303
Alignm identity: 219
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 20, 68

Conread position: 114-278
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 84

Conread position: 114-314
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 83

Conread position: 114-360
Cow position:
Alignm length: 256
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 12, 196

Conread position: 114-385
Cow position:
Alignm length: 284
Alignm identity: 194
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 206

Conread position: 115-389
Cow position:
Alignm length: 279
Alignm identity: 189
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 64, 17

Conread position: 116-271
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 85

Conread position: 116-294
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 81

Conread position: 116-343
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 15, 65

Conread position: 117-246
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 62, 13

Conread position: 117-253
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 64, 10

Conread position: 117-266
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 117-268
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 117-270
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 59, 83

Conread position: 117-300
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 10

Conread position: 119-275
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 80

Conread position: 119-297
Cow position:
Alignm length: 179
Alignm identity: 126
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 63, 0

Conread position: 122-300
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 76

Conread position: 122-363
Cow position:
Alignm length: 248
Alignm identity: 169
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 63

Conread position: 122-374
Cow position:
Alignm length: 261
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 25

Conread position: 123-277
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 78

Conread position: 123-300
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 123-313
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 79

Conread position: 123-348
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 83

Conread position: 124-300
Cow position:
Alignm length: 182
Alignm identity: 127
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 57, 0

Conread position: 127-254
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 52, 71

Conread position: 127-271
Cow position:
Alignm length: 147
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 127-273
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 72

Conread position: 127-273
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 72

Conread position: 127-278
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 78

Conread position: 127-284
Cow position:
Alignm length: 161
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 69

Conread position: 127-285
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 69

Conread position: 127-300
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 70

Conread position: 127-527
Cow position:
Alignm length: 438
Alignm identity: 308
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 119, 50

Conread position: 127-574
Cow position:
Alignm length: 471
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 185

Conread position: 128-240
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 51, 71

Conread position: 128-256
Cow position:
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 51, 0

Conread position: 128-261
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 126

Conread position: 128-267
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 128-271
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 76

Conread position: 128-274
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 70

Conread position: 128-275
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 72

Conread position: 128-278
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 48, 130

Conread position: 128-294
Cow position:
Alignm length: 169
Alignm identity: 121
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 45, 68

Conread position: 128-300
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 73

Conread position: 128-300
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 73

Conread position: 128-300
Cow position:
Alignm length: 175
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 165, 16

Conread position: 128-301
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 151, 59

Conread position: 128-318
Cow position:
Alignm length: 194
Alignm identity: 134
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 53, 71

Conread position: 128-356
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 186

Conread position: 128-360
Cow position:
Alignm length: 238
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 121, 49

Conread position: 128-360
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 51, 61

Conread position: 128-363
Cow position:
Alignm length: 243
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 128-377
Cow position:
Alignm length: 258
Alignm identity: 178
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 70

Conread position: 128-378
Cow position:
Alignm length: 260
Alignm identity: 175
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 72

Conread position: 128-379
Cow position:
Alignm length: 260
Alignm identity: 179
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 11, 66

Conread position: 128-389
Cow position:
Alignm length: 265
Alignm identity: 177
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 119, 47

Conread position: 128-389
Cow position:
Alignm length: 263
Alignm identity: 183
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 197, 59

Conread position: 128-406
Cow position:
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 155

Conread position: 128-426
Cow position:
Alignm length: 310
Alignm identity: 211
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 137, 16

Conread position: 128-475
Cow position:
Alignm length: 356
Alignm identity: 222
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 52, 189

Conread position: 128-574
Cow position:
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 73

Conread position: 129-267
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 129-274
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 71

Conread position: 130-383
Cow position:
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 119, 47

Conread position: 130-408
Cow position:
Alignm length: 285
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 41

Conread position: 130-531
Cow position:
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 47

Conread position: 132-267
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 74

Conread position: 133-574
Cow position:
Alignm length: 457
Alignm identity: 308
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 206, 42

Conread position: 135-389
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 42, 30

Conread position: 144-510
Cow position:
Alignm length: 376
Alignm identity: 247
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 33

Conread position: 149-406
Cow position:
Alignm length: 262
Alignm identity: 181
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 100, 30

Conread position: 161-378
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 213

Conread position: 172-406
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 75, 34

Conread position: 172-407
Cow position:
Alignm length: 247
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 147

Conread position: 173-574
Cow position:
Alignm length: 431
Alignm identity: 292
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 44, 156

Conread position: 187-574
Cow position:
Alignm length: 413
Alignm identity: 287
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 65

Conread position: 194-356
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 44, 129

Conread position: 196-407
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 67, 18

Conread position: 218-570
Cow position:
Alignm length: 371
Alignm identity: 266
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 43, 12

Conread position: 409-576
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 139, 43

Show alignments to all cow chromosomes.