Cow genome map

Conread name: Ss1.1-Thy1-THY010205G02.5

Conread position: 73-359
Cow position:
Alignm length: 295
Alignm identity: 196
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 71

Conread position: 73-363
Cow position:
Alignm length: 300
Alignm identity: 204
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 146

Conread position: 73-378
Cow position:
Alignm length: 316
Alignm identity: 204
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 39

Conread position: 73-378
Cow position:
Alignm length: 312
Alignm identity: 206
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 107, 38

Conread position: 74-300
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 78

Conread position: 101-275
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 26

Conread position: 101-300
Cow position:
Alignm length: 204
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 22

Conread position: 101-475
Cow position:
Alignm length: 382
Alignm identity: 246
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 69, 22

Conread position: 103-300
Cow position:
Alignm length: 205
Alignm identity: 151
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 76, 24

Conread position: 103-300
Cow position:
Alignm length: 202
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 26

Conread position: 103-380
Cow position:
Alignm length: 283
Alignm identity: 183
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 26

Conread position: 104-314
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 73, 25

Conread position: 105-246
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 78, 25

Conread position: 105-288
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 70, 121

Conread position: 105-297
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 73, 24

Conread position: 105-298
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 69, 24

Conread position: 105-298
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 69, 24

Conread position: 105-407
Cow position:
Alignm length: 312
Alignm identity: 221
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 72, 24

Conread position: 105-407
Cow position:
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 30

Conread position: 105-410
Cow position:
Alignm length: 316
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 25

Conread position: 106-503
Cow position:
Alignm length: 404
Alignm identity: 261
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 73, 23

Conread position: 106-576
Cow position:
Alignm length: 505
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 24

Conread position: 107-264
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 22

Conread position: 107-379
Cow position:
Alignm length: 283
Alignm identity: 195
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 22

Conread position: 108-271
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 93

Conread position: 108-278
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 89

Conread position: 108-280
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 108-284
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 52

Conread position: 108-294
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 23, 92

Conread position: 108-300
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 89

Conread position: 108-475
Cow position:
Alignm length: 376
Alignm identity: 235
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 71, 90

Conread position: 108-475
Cow position:
Alignm length: 381
Alignm identity: 248
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 88

Conread position: 109-264
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 109-286
Cow position:
Alignm length: 181
Alignm identity: 146
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 20, 70

Conread position: 109-298
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 22, 89

Conread position: 109-316
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 21, 205

Conread position: 109-325
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 31, 173

Conread position: 109-363
Cow position:
Alignm length: 266
Alignm identity: 176
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 107

Conread position: 109-363
Cow position:
Alignm length: 266
Alignm identity: 183
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 16, 80

Conread position: 109-364
Cow position:
Alignm length: 263
Alignm identity: 182
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 113

Conread position: 109-374
Cow position:
Alignm length: 276
Alignm identity: 187
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 21, 150

Conread position: 109-379
Cow position:
Alignm length: 283
Alignm identity: 190
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 186

Conread position: 109-379
Cow position:
Alignm length: 273
Alignm identity: 180
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 87, 25

Conread position: 109-387
Cow position:
Alignm length: 291
Alignm identity: 210
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 22, 210

Conread position: 109-387
Cow position:
Alignm length: 289
Alignm identity: 201
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 211

Conread position: 109-388
Cow position:
Alignm length: 286
Alignm identity: 190
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 144, 41

Conread position: 109-405
Cow position:
Alignm length: 309
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 103

Conread position: 109-407
Cow position:
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 74

Conread position: 109-407
Cow position:
Alignm length: 308
Alignm identity: 226
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 22, 72

Conread position: 109-407
Cow position:
Alignm length: 307
Alignm identity: 211
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 126, 66

Conread position: 109-407
Cow position:
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 142

Conread position: 109-432
Cow position:
Alignm length: 332
Alignm identity: 229
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 17, 51

Conread position: 110-270
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 21, 154

Conread position: 110-385
Cow position:
Alignm length: 283
Alignm identity: 185
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 37

Conread position: 110-406
Cow position:
Alignm length: 307
Alignm identity: 229
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 21, 89

Conread position: 114-363
Cow position:
Alignm length: 262
Alignm identity: 183
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 85

Conread position: 115-569
Cow position:
Alignm length: 473
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 66

Conread position: 116-264
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 11

Conread position: 116-271
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 11

Conread position: 116-300
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 65, 85

Conread position: 117-270
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 12

Conread position: 117-353
Cow position:
Alignm length: 242
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 12

Conread position: 117-366
Cow position:
Alignm length: 253
Alignm identity: 165
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 62, 80

Conread position: 118-374
Cow position:
Alignm length: 265
Alignm identity: 182
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 90

Conread position: 122-273
Cow position:
Alignm length: 154
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 57, 10

Conread position: 123-255
Cow position:
Alignm length: 135
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 123-267
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 56, 76

Conread position: 123-299
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 134, 54

Conread position: 123-300
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 123-374
Cow position:
Alignm length: 259
Alignm identity: 172
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 124, 74

Conread position: 123-378
Cow position:
Alignm length: 260
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 73

Conread position: 123-379
Cow position:
Alignm length: 261
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 126, 25

Conread position: 123-407
Cow position:
Alignm length: 291
Alignm identity: 205
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 15, 51

Conread position: 123-483
Cow position:
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 21

Conread position: 124-475
Cow position:
Alignm length: 361
Alignm identity: 229
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 55, 81

Conread position: 127-258
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 78

Conread position: 127-266
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 72

Conread position: 127-268
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 57, 22

Conread position: 127-273
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 72

Conread position: 127-275
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 69

Conread position: 127-277
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 128, 72

Conread position: 127-278
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 73

Conread position: 127-299
Cow position:
Alignm length: 178
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 162

Conread position: 127-318
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 72

Conread position: 127-318
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 71

Conread position: 128-267
Cow position:
Alignm length: 142
Alignm identity: 113
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 65, 59

Conread position: 128-288
Cow position:
Alignm length: 164
Alignm identity: 118
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 128-293
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 128-317
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 35

Conread position: 128-318
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 128-318
Cow position:
Alignm length: 196
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 16

Conread position: 128-318
Cow position:
Alignm length: 196
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 67

Conread position: 128-319
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 68

Conread position: 128-330
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 73

Conread position: 128-357
Cow position:
Alignm length: 233
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 131, 13

Conread position: 128-360
Cow position:
Alignm length: 235
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 77

Conread position: 128-363
Cow position:
Alignm length: 237
Alignm identity: 156
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 75, 49

Conread position: 128-363
Cow position:
Alignm length: 243
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 72

Conread position: 128-366
Cow position:
Alignm length: 243
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 84

Conread position: 128-377
Cow position:
Alignm length: 253
Alignm identity: 170
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 78

Conread position: 128-377
Cow position:
Alignm length: 259
Alignm identity: 177
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 67

Conread position: 128-378
Cow position:
Alignm length: 258
Alignm identity: 173
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 74

Conread position: 128-379
Cow position:
Alignm length: 257
Alignm identity: 179
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 22

Conread position: 128-387
Cow position:
Alignm length: 267
Alignm identity: 176
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 50

Conread position: 128-406
Cow position:
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 196

Conread position: 128-407
Cow position:
Alignm length: 286
Alignm identity: 194
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 129, 42

Conread position: 128-407
Cow position:
Alignm length: 286
Alignm identity: 206
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 118, 47

Conread position: 128-419
Cow position:
Alignm length: 300
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 80

Conread position: 128-482
Cow position:
Alignm length: 368
Alignm identity: 237
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 136, 49

Conread position: 129-316
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 50, 113

Conread position: 130-374
Cow position:
Alignm length: 253
Alignm identity: 169
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 41, 118

Conread position: 130-490
Cow position:
Alignm length: 369
Alignm identity: 242
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 11

Conread position: 131-300
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 74

Conread position: 132-389
Cow position:
Alignm length: 265
Alignm identity: 184
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 58, 45

Conread position: 134-314
Cow position:
Alignm length: 187
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 154-267
Cow position:
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 107

Conread position: 164-407
Cow position:
Alignm length: 250
Alignm identity: 190
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 15, 48

Conread position: 170-407
Cow position:
Alignm length: 242
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 26

Conread position: 200-407
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 86

Conread position: 207-407
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 54, 71

Conread position: 247-530
Cow position:
Alignm length: 300
Alignm identity: 221
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 44, 12

Conread position: 261-574
Cow position:
Alignm length: 325
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 11

Conread position: 263-574
Cow position:
Alignm length: 325
Alignm identity: 220
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 57

Conread position: 274-574
Cow position:
Alignm length: 334
Alignm identity: 240
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 17, 44

Conread position: 403-574
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 406-574
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 406-574
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 75, 46

Conread position: 406-576
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 410-571
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 425-573
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 27

Show alignments to all cow chromosomes.