Cow genome map
| Conread name: | Ss1.1-Thy1-THY010205G02.5 |
| Conread position: | 73-359 |
| Cow position: | chrX:9910960-9910672 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 38, 71 |
| Conread position: | 73-363 |
| Cow position: | chrX:27287927-27287634 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 42, 146 |
| Conread position: | 73-378 |
| Cow position: | chrX:6041403-6041092 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 39 |
| Conread position: | 73-378 |
| Cow position: | chrX:11614514-11614810 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 107, 38 |
| Conread position: | 74-300 |
| Cow position: | chrX:19878859-19879083 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 32, 78 |
| Conread position: | 101-275 |
| Cow position: | chrX:26876044-26875869 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 26 |
| Conread position: | 101-300 |
| Cow position: | chrX:3579783-3579981 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 22 |
| Conread position: | 101-475 |
| Cow position: | chrX:38963945-38964319 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 69, 22 |
| Conread position: | 103-300 |
| Cow position: | chrX:1616203-1616002 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 76, 24 |
| Conread position: | 103-300 |
| Cow position: | chrX:10831652-10831453 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 26 |
| Conread position: | 103-380 |
| Cow position: | chrX:16687280-16687558 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 35, 26 |
| Conread position: | 104-314 |
| Cow position: | chrX:9227136-9226921 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 73, 25 |
| Conread position: | 105-246 |
| Cow position: | chrX:35273199-35273339 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 78, 25 |
| Conread position: | 105-288 |
| Cow position: | chrX:25388391-25388206 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 70, 121 |
| Conread position: | 105-297 |
| Cow position: | chrX:31340551-31340745 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 73, 24 |
| Conread position: | 105-298 |
| Cow position: | chrX:8913766-8913960 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 69, 24 |
| Conread position: | 105-298 |
| Cow position: | chrX:8915510-8915704 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 69, 24 |
| Conread position: | 105-407 |
| Cow position: | chrX:12826594-12826897 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 72, 24 |
| Conread position: | 105-407 |
| Cow position: | chrX:23254367-23254053 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 30 |
| Conread position: | 105-410 |
| Cow position: | chrX:2147181-2147490 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 25 |
| Conread position: | 106-503 |
| Cow position: | chrX:25713641-25714025 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 73, 23 |
| Conread position: | 106-576 |
| Cow position: | chrX:21816105-21816597 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 24 |
| Conread position: | 107-264 |
| Cow position: | chrX:46315532-46315376 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 22 |
| Conread position: | 107-379 |
| Cow position: | chrX:32309954-32310224 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 73, 22 |
| Conread position: | 108-271 |
| Cow position: | chrX:7571747-7571913 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 108-278 |
| Cow position: | chrX:44396862-44397030 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 108-280 |
| Cow position: | chrX:31273089-31273264 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 108-284 |
| Cow position: | chrX:36067860-36068032 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 52 |
| Conread position: | 108-294 |
| Cow position: | chrX:41743753-41743939 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 23, 92 |
| Conread position: | 108-300 |
| Cow position: | chrX:6234608-6234413 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 72, 89 |
| Conread position: | 108-475 |
| Cow position: | chrX:1499510-1499876 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 71, 90 |
| Conread position: | 108-475 |
| Cow position: | chrX:25571153-25570782 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 109-264 |
| Cow position: | chrX:9161429-9161587 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 109-286 |
| Cow position: | chrX:280972-281148 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 20, 70 |
| Conread position: | 109-298 |
| Cow position: | chrX:28836060-28835865 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 22, 89 |
| Conread position: | 109-316 |
| Cow position: | chrX:24259740-24259528 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 21, 205 |
| Conread position: | 109-325 |
| Cow position: | chrX:46146719-46146499 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 31, 173 |
| Conread position: | 109-363 |
| Cow position: | chrX:10302180-10302444 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 107 |
| Conread position: | 109-363 |
| Cow position: | chrX:28929683-28929943 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 16, 80 |
| Conread position: | 109-364 |
| Cow position: | chrX:2764711-2764965 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 113 |
| Conread position: | 109-374 |
| Cow position: | chrX:17042532-17042795 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 21, 150 |
| Conread position: | 109-379 |
| Cow position: | chrX:28111348-28111627 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 186 |
| Conread position: | 109-379 |
| Cow position: | chrX:45633412-45633674 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 87, 25 |
| Conread position: | 109-387 |
| Cow position: | chrX:20791976-20791689 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 22, 210 |
| Conread position: | 109-387 |
| Cow position: | chrX:23666964-23667247 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 211 |
| Conread position: | 109-388 |
| Cow position: | chrX:2300775-2301051 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 144, 41 |
| Conread position: | 109-405 |
| Cow position: | chrX:11674907-11675210 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 103 |
| Conread position: | 109-407 |
| Cow position: | chrX:2186100-2186407 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 109-407 |
| Cow position: | chrX:7362009-7361722 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 109-407 |
| Cow position: | chrX:12689230-12688938 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 126, 66 |
| Conread position: | 109-407 |
| Cow position: | chrX:24201028-24201327 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 142 |
| Conread position: | 109-432 |
| Cow position: | chrX:35925806-35926128 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 17, 51 |
| Conread position: | 110-270 |
| Cow position: | chrX:33590570-33590737 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 21, 154 |
| Conread position: | 110-385 |
| Cow position: | chrX:32743381-32743657 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 110-406 |
| Cow position: | chrX:37956207-37956497 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 229 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 21, 89 |
| Conread position: | 114-363 |
| Cow position: | chrX:25193507-25193760 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 17, 85 |
| Conread position: | 115-569 |
| Cow position: | chrX:43647895-43647433 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 66 |
| Conread position: | 116-264 |
| Cow position: | chrX:17662739-17662592 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 11 |
| Conread position: | 116-271 |
| Cow position: | chrX:13785509-13785352 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 116-300 |
| Cow position: | chrX:27516381-27516567 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 85 |
| Conread position: | 117-270 |
| Cow position: | chrX:11589733-11589579 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 60, 12 |
| Conread position: | 117-353 |
| Cow position: | chrX:157918-157685 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 12 |
| Conread position: | 117-366 |
| Cow position: | chrX:7646110-7646357 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 62, 80 |
| Conread position: | 118-374 |
| Cow position: | chrX:45200042-45199786 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 37, 90 |
| Conread position: | 122-273 |
| Cow position: | chrX:20584184-20584335 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 57, 10 |
| Conread position: | 123-255 |
| Cow position: | chrX:30162856-30162990 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 123-267 |
| Cow position: | chrX:44053118-44053264 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 56, 76 |
| Conread position: | 123-299 |
| Cow position: | chrX:29055979-29056154 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 134, 54 |
| Conread position: | 123-300 |
| Cow position: | chrX:25232450-25232632 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 123-374 |
| Cow position: | chrX:34565143-34565397 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 124, 74 |
| Conread position: | 123-378 |
| Cow position: | chrX:29680400-29680144 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 73 |
| Conread position: | 123-379 |
| Cow position: | chrX:2786689-2786439 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 126, 25 |
| Conread position: | 123-407 |
| Cow position: | chrX:13058441-13058716 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 15, 51 |
| Conread position: | 123-483 |
| Cow position: | chrX:11981996-11982369 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 124-475 |
| Cow position: | chrX:21986431-21986079 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 55, 81 |
| Conread position: | 127-258 |
| Cow position: | chrX:35388038-35387906 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 52, 78 |
| Conread position: | 127-266 |
| Cow position: | chrX:29542355-29542214 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 127-268 |
| Cow position: | chrX:40035576-40035439 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 127-273 |
| Cow position: | chrX:616398-616252 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 127-275 |
| Cow position: | chrX:619140-618990 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 52, 69 |
| Conread position: | 127-277 |
| Cow position: | chrX:8869538-8869388 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 128, 72 |
| Conread position: | 127-278 |
| Cow position: | chrX:38439342-38439496 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 73 |
| Conread position: | 127-299 |
| Cow position: | chrX:11746708-11746884 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 162 |
| Conread position: | 127-318 |
| Cow position: | chrX:34401862-34402057 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 127-318 |
| Cow position: | chrX:41027021-41027216 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 71 |
| Conread position: | 128-267 |
| Cow position: | chrX:17725839-17725979 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 128-288 |
| Cow position: | chrX:488356-488519 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 128-293 |
| Cow position: | chrX:18456261-18456436 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 128-317 |
| Cow position: | chrX:38840755-38840940 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 35 |
| Conread position: | 128-318 |
| Cow position: | chrX:21566267-21566464 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 128-318 |
| Cow position: | chrX:29601964-29601771 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 128-318 |
| Cow position: | chrX:42171431-42171237 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 51, 67 |
| Conread position: | 128-319 |
| Cow position: | chrX:23514150-23513957 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 68 |
| Conread position: | 128-330 |
| Cow position: | chrX:29723606-29723806 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 52, 73 |
| Conread position: | 128-357 |
| Cow position: | chrX:39546107-39545882 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 131, 13 |
| Conread position: | 128-360 |
| Cow position: | chrX:630441-630210 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 77 |
| Conread position: | 128-363 |
| Cow position: | chrX:2029258-2029488 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 75, 49 |
| Conread position: | 128-363 |
| Cow position: | chrX:7497108-7497345 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 128-366 |
| Cow position: | chrX:39415503-39415264 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 84 |
| Conread position: | 128-377 |
| Cow position: | chrX:11562021-11562262 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 51, 78 |
| Conread position: | 128-377 |
| Cow position: | chrX:25338048-25338303 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 51, 67 |
| Conread position: | 128-378 |
| Cow position: | chrX:15007285-15007032 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 74 |
| Conread position: | 128-379 |
| Cow position: | chrX:24132283-24132033 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 22 |
| Conread position: | 128-387 |
| Cow position: | chrX:40692887-40692625 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 50 |
| Conread position: | 128-406 |
| Cow position: | chrX:13245459-13245742 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 196 |
| Conread position: | 128-407 |
| Cow position: | chrX:3147066-3147347 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 129, 42 |
| Conread position: | 128-407 |
| Cow position: | chrX:30729535-30729266 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 118, 47 |
| Conread position: | 128-419 |
| Cow position: | chrX:8558594-8558304 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 80 |
| Conread position: | 128-482 |
| Cow position: | chrX:38549317-38549676 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 136, 49 |
| Conread position: | 129-316 |
| Cow position: | chrX:27450133-27449942 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 50, 113 |
| Conread position: | 130-374 |
| Cow position: | chrX:16284078-16283830 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 41, 118 |
| Conread position: | 130-490 |
| Cow position: | chrX:21664855-21664508 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 131-300 |
| Cow position: | chrX:40685463-40685289 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 74 |
| Conread position: | 132-389 |
| Cow position: | chrX:10329041-10328784 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 58, 45 |
| Conread position: | 134-314 |
| Cow position: | chrX:26493766-26493580 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 154-267 |
| Cow position: | chrX:41303220-41303105 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 107 |
| Conread position: | 164-407 |
| Cow position: | chrX:4631771-4631525 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 15, 48 |
| Conread position: | 170-407 |
| Cow position: | chrX:905243-905477 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 112, 26 |
| Conread position: | 200-407 |
| Cow position: | chrX:24827241-24827453 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 86 |
| Conread position: | 207-407 |
| Cow position: | chrX:16816614-16816817 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 54, 71 |
| Conread position: | 247-530 |
| Cow position: | chrX:10311733-10312019 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 261-574 |
| Cow position: | chrX:20504716-20505034 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 263-574 |
| Cow position: | chrX:41660179-41660486 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 57 |
| Conread position: | 274-574 |
| Cow position: | chrX:19018243-19017917 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 403-574 |
| Cow position: | chrX:24286128-24286290 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 406-574 |
| Cow position: | chrX:956651-956804 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 406-574 |
| Cow position: | chrX:23254031-23253862 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 75, 46 |
| Conread position: | 406-576 |
| Cow position: | chrX:11675235-11675400 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 410-571 |
| Cow position: | chrX:8558290-8558135 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 425-573 |
| Cow position: | chrX:24952185-24952035 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 27 |
Show alignments to all cow chromosomes.