Cow genome map
| Conread name: | Ss1.1-Thy1-THY010206D04.5 |
| Conread position: | 4-260 |
| Cow position: | chr21:23793446-23793709 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 69 |
| Conread position: | 4-261 |
| Cow position: | chr21:23775110-23775374 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 117, 69 |
| Conread position: | 6-260 |
| Cow position: | chr21:23843337-23843080 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 15-260 |
| Cow position: | chr21:23853225-23852968 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 95, 60 |
| Conread position: | 263-424 |
| Cow position: | chr21:23776400-23776560 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 139 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 263-424 |
| Cow position: | chr21:23794734-23794895 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 144 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 264-424 |
| Cow position: | chr21:23712056-23712216 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 83, 76 |
| Conread position: | 267-424 |
| Cow position: | chr21:23771107-23771264 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 17, 11 |
| Conread position: | 267-424 |
| Cow position: | chr21:23789448-23789605 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 82, 73 |
| Conread position: | 267-424 |
| Cow position: | chr21:23816375-23816532 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 89 |
| Conread position: | 267-424 |
| Cow position: | chr21:23833003-23832846 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 79, 89 |
| Conread position: | 267-424 |
| Cow position: | chr21:23857501-23857344 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 75 |
| Conread position: | 423-554 |
| Cow position: | chr21:23712701-23712832 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 423-560 |
| Cow position: | chr21:23777090-23777227 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 423-560 |
| Cow position: | chr21:23795423-23795560 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 423-564 |
| Cow position: | chr21:23847237-23847097 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 423-584 |
| Cow position: | chr21:23790091-23790252 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 114, 102 |
| Conread position: | 423-584 |
| Cow position: | chr21:23856854-23856693 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 148, 143 |
| Conread position: | 425-584 |
| Cow position: | chr21:23771751-23771910 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 146, 141 |
| Conread position: | 558-818 |
| Cow position: | chr21:23713033-23713286 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 194, 0 |
| Conread position: | 558-822 |
| Cow position: | chr21:23795759-23796020 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 0 |
| Conread position: | 559-822 |
| Cow position: | chr21:23777422-23777684 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 98, 126 |
| Conread position: | 820-924 |
| Cow position: | chr21:23796397-23796501 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.