Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01A040044.5 |
| Conread position: | 857-1092 |
| Cow position: | |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 858-1085 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 123, 38 |
| Conread position: | 861-1081 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 867-1002 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 867-1004 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 867-1021 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 47, 15 |
| Conread position: | 867-1034 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 114, 32 |
| Conread position: | 867-1039 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 114, 19 |
| Conread position: | 867-1046 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 114, 39 |
| Conread position: | 867-1047 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 867-1054 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 109, 58 |
| Conread position: | 867-1061 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 867-1063 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 114, 48 |
| Conread position: | 867-1066 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 152, 58 |
| Conread position: | 867-1067 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 117, 32 |
| Conread position: | 867-1069 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 117 |
| Conread position: | 867-1071 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 38, 120 |
| Conread position: | 867-1072 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 54, 41 |
| Conread position: | 867-1074 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 97 |
| Conread position: | 867-1075 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 114, 49 |
| Conread position: | 867-1075 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 161 |
| Conread position: | 867-1075 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 114, 42 |
| Conread position: | 867-1076 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 47, 58 |
| Conread position: | 867-1076 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 867-1076 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 114, 48 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 114, 49 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 114, 20 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 116, 49 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 51, 28 |
| Conread position: | 867-1082 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 59, 115 |
| Conread position: | 867-1082 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 867-1082 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 173 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 114, 28 |
| Conread position: | 867-1083 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 177 |
| Conread position: | 867-1085 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 867-1085 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 867-1086 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 43, 52 |
| Conread position: | 867-1086 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 114, 14 |
| Conread position: | 867-1087 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 51, 163 |
| Conread position: | 867-1087 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 117, 34 |
| Conread position: | 867-1087 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 114, 19 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 152, 42 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 151, 46 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 114, 91 |
| Conread position: | 867-1089 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 114, 40 |
| Conread position: | 867-1095 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 117, 211 |
| Conread position: | 867-1110 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 54, 235 |
| Conread position: | 867-1119 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 102, 219 |
| Conread position: | 867-1142 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 72, 24 |
| Conread position: | 868-1075 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 116, 40 |
| Conread position: | 868-1087 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 47, 140 |
| Conread position: | 869-1081 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 870-1001 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 870-1075 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 21, 99 |
| Conread position: | 870-1075 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 38 |
| Conread position: | 870-1075 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 109, 54 |
| Conread position: | 870-1081 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 42, 107 |
| Conread position: | 870-1082 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 113, 55 |
| Conread position: | 870-1087 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 111, 11 |
| Conread position: | 870-1092 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 111, 47 |
| Conread position: | 870-1104 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 111, 167 |
| Conread position: | 870-1119 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 111, 205 |
| Conread position: | 871-1076 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 110, 136 |
| Conread position: | 872-1071 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 112, 65 |
| Conread position: | 872-1074 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 100, 31 |
| Conread position: | 872-1081 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 872-1086 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 54, 116 |
| Conread position: | 873-1081 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 48, 187 |
| Conread position: | 874-1032 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 874-1047 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 107, 49 |
| Conread position: | 874-1081 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 875-1076 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 101, 33 |
| Conread position: | 875-1081 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 875-1081 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 165 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 876-1088 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 12, 53 |
| Conread position: | 881-1071 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 35, 127 |
| Conread position: | 881-1113 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 103, 52 |
| Conread position: | 882-1073 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 102, 34 |
| Conread position: | 885-1071 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 887-1081 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 94, 163 |
| Conread position: | 894-1076 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 21, 107 |
| Conread position: | 899-1081 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 160 |
| Conread position: | 904-1061 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 908-1069 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 6, 65 |
| Conread position: | 908-1071 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 910-1076 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 913-1047 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 915-1081 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 69, 8 |
| Conread position: | 916-1076 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 90, 65 |
| Conread position: | 920-1075 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 127, 105 |
| Conread position: | 922-1087 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 157 |
| Conread position: | 925-1073 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 56, 102 |
Show alignments to all cow chromosomes.