Cow genome map
Conread name: | Ss1.1-Tra1-TCH01A040044.5 |
Conread position: | 858-1021 |
Cow position: | chr14:3162857-3162696 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 121 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 122, 28 |
Conread position: | 858-1081 |
Cow position: | chr14:21357690-21357466 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 152 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 62, 29 |
Conread position: | 858-1081 |
Cow position: | chr14:45677367-45677138 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 167 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 10, 105 |
Conread position: | 862-1066 |
Cow position: | chr14:19959607-19959810 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 146 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 9, 31 |
Conread position: | 864-1086 |
Cow position: | chr14:41486135-41486353 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 156 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 864-1087 |
Cow position: | chr14:10693134-10693348 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 159 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 867-979 |
Cow position: | chr14:39770111-39770222 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 90 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 867-1047 |
Cow position: | chr14:24417006-24416820 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 134 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 49, 18 |
Conread position: | 867-1047 |
Cow position: | chr14:27591832-27592013 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 141 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 53, 139 |
Conread position: | 867-1047 |
Cow position: | chr14:39778877-39778695 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 131 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 867-1054 |
Cow position: | chr14:2038693-2038872 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 133 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 117, 38 |
Conread position: | 867-1059 |
Cow position: | chr14:35018633-35018822 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 138 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 51, 19 |
Conread position: | 867-1061 |
Cow position: | chr14:4282386-4282577 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 138 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 867-1068 |
Cow position: | chr14:19372463-19372263 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 152 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 114, 183 |
Conread position: | 867-1070 |
Cow position: | chr14:47170230-47170433 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 147 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 26, 63 |
Conread position: | 867-1071 |
Cow position: | chr14:4877110-4877310 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 143 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 175, 40 |
Conread position: | 867-1072 |
Cow position: | chr14:32371622-32371820 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 142 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 867-1073 |
Cow position: | chr14:16549882-16550084 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 152 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 114, 51 |
Conread position: | 867-1074 |
Cow position: | chr14:48773026-48772821 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 141 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 115, 57 |
Conread position: | 867-1075 |
Cow position: | chr14:19129631-19129419 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 146 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 48, 164 |
Conread position: | 867-1075 |
Cow position: | chr14:19189164-19188960 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 147 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 40, 28 |
Conread position: | 867-1076 |
Cow position: | chr14:13042878-13042673 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 153 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 55, 44 |
Conread position: | 867-1076 |
Cow position: | chr14:33714555-33714759 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 155 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 114, 69 |
Conread position: | 867-1081 |
Cow position: | chr14:1646070-1646276 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 152 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 156, 40 |
Conread position: | 867-1081 |
Cow position: | chr14:20640505-20640720 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 109 |
Conread position: | 867-1081 |
Cow position: | chr14:33791308-33791102 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 169 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 211, 44 |
Conread position: | 867-1081 |
Cow position: | chr14:48427195-48426981 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 149 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 189, 114 |
Conread position: | 867-1082 |
Cow position: | chr14:18345612-18345816 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 172 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 31, 14 |
Conread position: | 867-1084 |
Cow position: | chr14:37131777-37131571 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 154 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 867-1088 |
Cow position: | chr14:26433118-26433337 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 167 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 114, 185 |
Conread position: | 867-1096 |
Cow position: | chr14:15492718-15492489 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 158 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 114, 212 |
Conread position: | 867-1096 |
Cow position: | chr14:24608088-24607862 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 166 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 45, 52 |
Conread position: | 867-1107 |
Cow position: | chr14:10078391-10078150 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 182 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 114, 42 |
Conread position: | 870-1027 |
Cow position: | chr14:39774930-39775088 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 118 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 63, 135 |
Conread position: | 870-1067 |
Cow position: | chr14:24945372-24945567 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 151 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 45, 10 |
Conread position: | 870-1076 |
Cow position: | chr14:19863314-19863518 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 147 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 111, 54 |
Conread position: | 870-1082 |
Cow position: | chr14:19951688-19951477 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 150 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 114, 52 |
Conread position: | 870-1082 |
Cow position: | chr14:33830415-33830209 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 146 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 207, 37 |
Conread position: | 870-1085 |
Cow position: | chr14:48838714-48838501 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 154 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 108, 42 |
Conread position: | 870-1086 |
Cow position: | chr14:24981573-24981362 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 147 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 204, 52 |
Conread position: | 870-1087 |
Cow position: | chr14:42437144-42436929 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 151 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 111, 93 |
Conread position: | 870-1097 |
Cow position: | chr14:28115067-28115293 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 164 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 111, 46 |
Conread position: | 870-1107 |
Cow position: | chr14:22941603-22941844 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 164 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 46, 161 |
Conread position: | 870-1107 |
Cow position: | chr14:33300821-33300591 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 173 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 153, 52 |
Conread position: | 871-1047 |
Cow position: | chr14:29698240-29698418 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 134 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 44, 10 |
Conread position: | 871-1081 |
Cow position: | chr14:20110605-20110812 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 155 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 36, 19 |
Conread position: | 871-1088 |
Cow position: | chr14:8750193-8749980 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 160 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 38, 118 |
Conread position: | 871-1088 |
Cow position: | chr14:26442222-26442437 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 162 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 47, 38 |
Conread position: | 872-1060 |
Cow position: | chr14:9308347-9308160 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 141 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 109, 19 |
Conread position: | 872-1071 |
Cow position: | chr14:19360011-19359808 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 146 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 41, 9 |
Conread position: | 872-1075 |
Cow position: | chr14:42154847-42155057 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 155 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 37, 132 |
Conread position: | 873-1047 |
Cow position: | chr14:15997646-15997822 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 125 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 873-1074 |
Cow position: | chr14:41210971-41210771 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 152 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 108, 43 |
Conread position: | 873-1080 |
Cow position: | chr14:24796317-24796523 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 150 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 108, 9 |
Conread position: | 873-1096 |
Cow position: | chr14:23682383-23682160 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 158 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 9, 184 |
Conread position: | 874-1114 |
Cow position: | chr14:33751651-33751414 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 173 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 107, 56 |
Conread position: | 875-1071 |
Cow position: | chr14:29632770-29632959 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 143 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 875-1081 |
Cow position: | chr14:13846109-13845896 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 168 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 28, 14 |
Conread position: | 876-1082 |
Cow position: | chr14:5557006-5557211 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 141 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 102, 190 |
Conread position: | 878-1041 |
Cow position: | chr14:42480108-42480268 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 122 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 103, 56 |
Conread position: | 878-1077 |
Cow position: | chr14:16524587-16524380 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 150 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 881-1021 |
Cow position: | chr14:2345177-2345036 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 113 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 881-1061 |
Cow position: | chr14:16256876-16256688 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 136 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 881-1088 |
Cow position: | chr14:10631015-10631217 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 145 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 102, 28 |
Conread position: | 881-1088 |
Cow position: | chr14:25225839-25225629 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 152 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 40, 147 |
Conread position: | 881-1091 |
Cow position: | chr14:25903633-25903430 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 147 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 103, 26 |
Conread position: | 883-1084 |
Cow position: | chr14:16760508-16760305 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 153 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 31, 61 |
Conread position: | 887-1062 |
Cow position: | chr14:41837770-41837944 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 127 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 94, 38 |
Conread position: | 887-1075 |
Cow position: | chr14:11643154-11643334 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 135 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 130, 10 |
Conread position: | 889-1082 |
Cow position: | chr14:21224740-21224553 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 139 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 89, 132 |
Conread position: | 892-1059 |
Cow position: | chr14:3779435-3779266 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 123 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 89, 158 |
Conread position: | 895-1142 |
Cow position: | chr14:45576998-45577241 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 167 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 86, 21 |
Conread position: | 901-1060 |
Cow position: | chr14:10852120-10851961 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 125 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 19, 14 |
Conread position: | 904-1112 |
Cow position: | chr14:16457603-16457403 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 148 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 911-1088 |
Cow position: | chr14:34096487-34096660 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 132 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 95, 67 |
Conread position: | 912-1098 |
Cow position: | chr14:4848424-4848241 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 135 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 72, 13 |
Conread position: | 913-1076 |
Cow position: | chr14:20826566-20826406 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 126 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 68, 16 |
Conread position: | 913-1076 |
Cow position: | chr14:43868387-43868222 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 126 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 68, 94 |
Conread position: | 914-1088 |
Cow position: | chr14:12033163-12033333 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 129 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 5, 85 |
Conread position: | 915-1074 |
Cow position: | chr14:19487372-19487213 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 125 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 13, 145 |
Conread position: | 916-1074 |
Cow position: | chr14:29734289-29734447 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 124 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 65, 111 |
Conread position: | 918-1074 |
Cow position: | chr14:36254623-36254780 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 116 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 920-1088 |
Cow position: | chr14:38338063-38338228 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 125 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 61, 98 |
Conread position: | 926-1107 |
Cow position: | chr14:18302026-18301847 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 139 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 57, 101 |
Conread position: | 928-1081 |
Cow position: | chr14:10706938-10706787 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 114 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 56, 41 |
Show alignments to all cow chromosomes.