Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01A040044.5 |
| Conread position: | 858-1021 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 122, 28 |
| Conread position: | 858-1081 |
| Cow position: | |
| Alignm length: | 228 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 858-1081 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 10, 105 |
| Conread position: | 862-1066 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 864-1086 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 864-1087 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 867-979 |
| Cow position: | |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 867-1047 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 867-1047 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 53, 139 |
| Conread position: | 867-1047 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 867-1054 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 117, 38 |
| Conread position: | 867-1059 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 19 |
| Conread position: | 867-1061 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 867-1068 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 114, 183 |
| Conread position: | 867-1070 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 26, 63 |
| Conread position: | 867-1071 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 175, 40 |
| Conread position: | 867-1072 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 867-1073 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 114, 51 |
| Conread position: | 867-1074 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 115, 57 |
| Conread position: | 867-1075 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 164 |
| Conread position: | 867-1075 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 867-1076 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 55, 44 |
| Conread position: | 867-1076 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 114, 69 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 156, 40 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 109 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 211, 44 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 189, 114 |
| Conread position: | 867-1082 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 867-1084 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 114, 185 |
| Conread position: | 867-1096 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 114, 212 |
| Conread position: | 867-1096 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 45, 52 |
| Conread position: | 867-1107 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 114, 42 |
| Conread position: | 870-1027 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 63, 135 |
| Conread position: | 870-1067 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 870-1076 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 111, 54 |
| Conread position: | 870-1082 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 114, 52 |
| Conread position: | 870-1082 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 207, 37 |
| Conread position: | 870-1085 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 108, 42 |
| Conread position: | 870-1086 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 204, 52 |
| Conread position: | 870-1087 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 111, 93 |
| Conread position: | 870-1097 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 111, 46 |
| Conread position: | 870-1107 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 46, 161 |
| Conread position: | 870-1107 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 153, 52 |
| Conread position: | 871-1047 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 44, 10 |
| Conread position: | 871-1081 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 871-1088 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 118 |
| Conread position: | 871-1088 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 47, 38 |
| Conread position: | 872-1060 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 109, 19 |
| Conread position: | 872-1071 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 872-1075 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 132 |
| Conread position: | 873-1047 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 873-1074 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 108, 43 |
| Conread position: | 873-1080 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 108, 9 |
| Conread position: | 873-1096 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 9, 184 |
| Conread position: | 874-1114 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 107, 56 |
| Conread position: | 875-1071 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 875-1081 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 876-1082 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 102, 190 |
| Conread position: | 878-1041 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 103, 56 |
| Conread position: | 878-1077 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 881-1021 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 881-1061 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 881-1088 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 102, 28 |
| Conread position: | 881-1088 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 147 |
| Conread position: | 881-1091 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 103, 26 |
| Conread position: | 883-1084 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 61 |
| Conread position: | 887-1062 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 94, 38 |
| Conread position: | 887-1075 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 130, 10 |
| Conread position: | 889-1082 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 89, 132 |
| Conread position: | 892-1059 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 89, 158 |
| Conread position: | 895-1142 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 86, 21 |
| Conread position: | 901-1060 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 904-1112 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 911-1088 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 95, 67 |
| Conread position: | 912-1098 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 72, 13 |
| Conread position: | 913-1076 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 68, 16 |
| Conread position: | 913-1076 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 68, 94 |
| Conread position: | 914-1088 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 85 |
| Conread position: | 915-1074 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 13, 145 |
| Conread position: | 916-1074 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 65, 111 |
| Conread position: | 918-1074 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 920-1088 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 926-1107 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 57, 101 |
| Conread position: | 928-1081 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 41 |
Show alignments to all cow chromosomes.