Cow genome map

Conread name: Ss1.1-Tra1-TCH01A040044.5

Conread position: 858-1021
Cow position: chr14:3162857-3162696 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 122, 28

Conread position: 858-1081
Cow position: chr14:21357690-21357466 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 152
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 62, 29

Conread position: 858-1081
Cow position: chr14:45677367-45677138 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 105

Conread position: 862-1066
Cow position: chr14:19959607-19959810 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 31

Conread position: 864-1086
Cow position: chr14:41486135-41486353 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 114, 0

Conread position: 864-1087
Cow position: chr14:10693134-10693348 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 867-979
Cow position: chr14:39770111-39770222 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 867-1047
Cow position: chr14:24417006-24416820 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 49, 18

Conread position: 867-1047
Cow position: chr14:27591832-27592013 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 53, 139

Conread position: 867-1047
Cow position: chr14:39778877-39778695 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 867-1054
Cow position: chr14:2038693-2038872 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 117, 38

Conread position: 867-1059
Cow position: chr14:35018633-35018822 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 19

Conread position: 867-1061
Cow position: chr14:4282386-4282577 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 867-1068
Cow position: chr14:19372463-19372263 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 114, 183

Conread position: 867-1070
Cow position: chr14:47170230-47170433 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 63

Conread position: 867-1071
Cow position: chr14:4877110-4877310 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 175, 40

Conread position: 867-1072
Cow position: chr14:32371622-32371820 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 867-1073
Cow position: chr14:16549882-16550084 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 114, 51

Conread position: 867-1074
Cow position: chr14:48773026-48772821 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 141
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 115, 57

Conread position: 867-1075
Cow position: chr14:19129631-19129419 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 48, 164

Conread position: 867-1075
Cow position: chr14:19189164-19188960 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 40, 28

Conread position: 867-1076
Cow position: chr14:13042878-13042673 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 44

Conread position: 867-1076
Cow position: chr14:33714555-33714759 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 114, 69

Conread position: 867-1081
Cow position: chr14:1646070-1646276 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 156, 40

Conread position: 867-1081
Cow position: chr14:20640505-20640720 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 109

Conread position: 867-1081
Cow position: chr14:33791308-33791102 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 211, 44

Conread position: 867-1081
Cow position: chr14:48427195-48426981 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 189, 114

Conread position: 867-1082
Cow position: chr14:18345612-18345816 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 172
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 31, 14

Conread position: 867-1084
Cow position: chr14:37131777-37131571 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 867-1088
Cow position: chr14:26433118-26433337 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 114, 185

Conread position: 867-1096
Cow position: chr14:15492718-15492489 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 114, 212

Conread position: 867-1096
Cow position: chr14:24608088-24607862 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 45, 52

Conread position: 867-1107
Cow position: chr14:10078391-10078150 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 114, 42

Conread position: 870-1027
Cow position: chr14:39774930-39775088 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 63, 135

Conread position: 870-1067
Cow position: chr14:24945372-24945567 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 45, 10

Conread position: 870-1076
Cow position: chr14:19863314-19863518 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 111, 54

Conread position: 870-1082
Cow position: chr14:19951688-19951477 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 114, 52

Conread position: 870-1082
Cow position: chr14:33830415-33830209 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 207, 37

Conread position: 870-1085
Cow position: chr14:48838714-48838501 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 108, 42

Conread position: 870-1086
Cow position: chr14:24981573-24981362 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 204, 52

Conread position: 870-1087
Cow position: chr14:42437144-42436929 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 111, 93

Conread position: 870-1097
Cow position: chr14:28115067-28115293 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 111, 46

Conread position: 870-1107
Cow position: chr14:22941603-22941844 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 46, 161

Conread position: 870-1107
Cow position: chr14:33300821-33300591 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 153, 52

Conread position: 871-1047
Cow position: chr14:29698240-29698418 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 44, 10

Conread position: 871-1081
Cow position: chr14:20110605-20110812 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 36, 19

Conread position: 871-1088
Cow position: chr14:8750193-8749980 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 118

Conread position: 871-1088
Cow position: chr14:26442222-26442437 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 47, 38

Conread position: 872-1060
Cow position: chr14:9308347-9308160 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 109, 19

Conread position: 872-1071
Cow position: chr14:19360011-19359808 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 9

Conread position: 872-1075
Cow position: chr14:42154847-42155057 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 132

Conread position: 873-1047
Cow position: chr14:15997646-15997822 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 873-1074
Cow position: chr14:41210971-41210771 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 108, 43

Conread position: 873-1080
Cow position: chr14:24796317-24796523 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 9

Conread position: 873-1096
Cow position: chr14:23682383-23682160 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 9, 184

Conread position: 874-1114
Cow position: chr14:33751651-33751414 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 107, 56

Conread position: 875-1071
Cow position: chr14:29632770-29632959 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 875-1081
Cow position: chr14:13846109-13845896 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 28, 14

Conread position: 876-1082
Cow position: chr14:5557006-5557211 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 102, 190

Conread position: 878-1041
Cow position: chr14:42480108-42480268 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 56

Conread position: 878-1077
Cow position: chr14:16524587-16524380 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 881-1021
Cow position: chr14:2345177-2345036 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 100, 0

Conread position: 881-1061
Cow position: chr14:16256876-16256688 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 105, 0

Conread position: 881-1088
Cow position: chr14:10631015-10631217 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 28

Conread position: 881-1088
Cow position: chr14:25225839-25225629 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 147

Conread position: 881-1091
Cow position: chr14:25903633-25903430 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 26

Conread position: 883-1084
Cow position: chr14:16760508-16760305 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 61

Conread position: 887-1062
Cow position: chr14:41837770-41837944 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 94, 38

Conread position: 887-1075
Cow position: chr14:11643154-11643334 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 130, 10

Conread position: 889-1082
Cow position: chr14:21224740-21224553 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 89, 132

Conread position: 892-1059
Cow position: chr14:3779435-3779266 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 89, 158

Conread position: 895-1142
Cow position: chr14:45576998-45577241 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 86, 21

Conread position: 901-1060
Cow position: chr14:10852120-10851961 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 14

Conread position: 904-1112
Cow position: chr14:16457603-16457403 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 911-1088
Cow position: chr14:34096487-34096660 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 67

Conread position: 912-1098
Cow position: chr14:4848424-4848241 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 72, 13

Conread position: 913-1076
Cow position: chr14:20826566-20826406 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 68, 16

Conread position: 913-1076
Cow position: chr14:43868387-43868222 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 68, 94

Conread position: 914-1088
Cow position: chr14:12033163-12033333 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 85

Conread position: 915-1074
Cow position: chr14:19487372-19487213 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 145

Conread position: 916-1074
Cow position: chr14:29734289-29734447 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 65, 111

Conread position: 918-1074
Cow position: chr14:36254623-36254780 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 920-1088
Cow position: chr14:38338063-38338228 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 98

Conread position: 926-1107
Cow position: chr14:18302026-18301847 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 101

Conread position: 928-1081
Cow position: chr14:10706938-10706787 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 41

Show alignments to all cow chromosomes.