Cow genome map

Conread name: Ss1.1-Tra1-TCH01A040044.5

Conread position: 848-1110
Cow position: chr15:32977656-32977919 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 176
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 72

Conread position: 856-1075
Cow position: chr15:244964-244744 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 25

Conread position: 856-1096
Cow position: chr15:36845994-36846239 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 11, 125

Conread position: 859-1070
Cow position: chr15:14988165-14987957 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 67, 9

Conread position: 863-1076
Cow position: chr15:14176328-14176538 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 122, 10

Conread position: 867-975
Cow position: chr15:16261482-16261376 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 867-1021
Cow position: chr15:13515537-13515382 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 45, 53

Conread position: 867-1021
Cow position: chr15:18647546-18647396 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 115

Conread position: 867-1043
Cow position: chr15:4093764-4093939 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 117, 42

Conread position: 867-1045
Cow position: chr15:24128200-24128023 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 47, 60

Conread position: 867-1049
Cow position: chr15:5730110-5729929 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 99, 51

Conread position: 867-1054
Cow position: chr15:17870117-17870301 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 105, 37

Conread position: 867-1054
Cow position: chr15:35425645-35425826 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 867-1058
Cow position: chr15:6970157-6969967 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 117, 56

Conread position: 867-1061
Cow position: chr15:30047374-30047569 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 57, 184

Conread position: 867-1066
Cow position: chr15:20351999-20351803 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 117, 47

Conread position: 867-1069
Cow position: chr15:16908600-16908403 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 111, 31

Conread position: 867-1070
Cow position: chr15:39598411-39598209 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 114, 34

Conread position: 867-1074
Cow position: chr15:11011436-11011640 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 116, 42

Conread position: 867-1074
Cow position: chr15:17337527-17337325 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 111, 42

Conread position: 867-1075
Cow position: chr15:3700117-3700325 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 97

Conread position: 867-1075
Cow position: chr15:21821157-21820953 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 134, 0

Conread position: 867-1075
Cow position: chr15:30470801-30471010 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 114, 0

Conread position: 867-1075
Cow position: chr15:33306278-33306072 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 114, 32

Conread position: 867-1076
Cow position: chr15:51307511-51307718 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 114, 159

Conread position: 867-1078
Cow position: chr15:26911908-26912111 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 867-1081
Cow position: chr15:14576503-14576285 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 165

Conread position: 867-1081
Cow position: chr15:36353837-36353625 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 114, 19

Conread position: 867-1082
Cow position: chr15:1503074-1502870 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 115

Conread position: 867-1082
Cow position: chr15:2380525-2380322 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 54, 110

Conread position: 867-1082
Cow position: chr15:18671284-18671498 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 165

Conread position: 867-1082
Cow position: chr15:25208594-25208802 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 114, 40

Conread position: 867-1083
Cow position: chr15:23696742-23696950 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 114, 40

Conread position: 867-1084
Cow position: chr15:6530679-6530894 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 117, 41

Conread position: 867-1088
Cow position: chr15:10442335-10442552 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 86

Conread position: 867-1088
Cow position: chr15:12304810-12304588 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 211

Conread position: 867-1088
Cow position: chr15:23275704-23275490 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 117, 26

Conread position: 867-1088
Cow position: chr15:31175969-31175741 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 117

Conread position: 867-1088
Cow position: chr15:42788979-42789199 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 70, 42

Conread position: 867-1088
Cow position: chr15:49258031-49257816 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 104, 21

Conread position: 867-1102
Cow position: chr15:17100542-17100770 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 867-1204
Cow position: chr15:16307581-16307258 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 114, 20

Conread position: 868-1001
Cow position: chr15:38877134-38877268 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 113, 0

Conread position: 868-1047
Cow position: chr15:6905240-6905067 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 123, 41

Conread position: 868-1075
Cow position: chr15:275821-275616 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 151, 19

Conread position: 870-1021
Cow position: chr15:50322761-50322610 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 53

Conread position: 870-1047
Cow position: chr15:14870909-14870733 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 49, 109

Conread position: 870-1047
Cow position: chr15:41125405-41125583 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 111, 42

Conread position: 870-1060
Cow position: chr15:21893947-21893756 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 157

Conread position: 870-1067
Cow position: chr15:36259437-36259631 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 113, 46

Conread position: 870-1081
Cow position: chr15:5420715-5420926 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 159

Conread position: 870-1081
Cow position: chr15:41527811-41528015 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 870-1084
Cow position: chr15:20391109-20391325 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 47, 65

Conread position: 870-1088
Cow position: chr15:22871771-22871564 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 870-1090
Cow position: chr15:52611475-52611253 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 184

Conread position: 870-1095
Cow position: chr15:16112565-16112343 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 115, 27

Conread position: 870-1107
Cow position: chr15:5726489-5726255 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 114, 36

Conread position: 870-1108
Cow position: chr15:35440910-35441152 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 124

Conread position: 871-1054
Cow position: chr15:25907082-25906890 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 871-1062
Cow position: chr15:14888476-14888669 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 47, 167

Conread position: 871-1076
Cow position: chr15:24994349-24994551 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 113, 38

Conread position: 871-1077
Cow position: chr15:8354208-8354000 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 107, 0

Conread position: 871-1082
Cow position: chr15:50302348-50302142 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 40, 54

Conread position: 871-1082
Cow position: chr15:53716597-53716391 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 47, 16

Conread position: 872-1066
Cow position: chr15:34207026-34207216 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 101

Conread position: 872-1081
Cow position: chr15:33643256-33643047 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 54, 40

Conread position: 872-1087
Cow position: chr15:41056041-41056256 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 112, 29

Conread position: 874-1041
Cow position: chr15:23567966-23568131 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 33, 7

Conread position: 874-1084
Cow position: chr15:5658001-5657788 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 104, 67

Conread position: 874-1084
Cow position: chr15:47042464-47042677 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 7, 44

Conread position: 874-1087
Cow position: chr15:26718759-26718969 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 69, 0

Conread position: 875-1062
Cow position: chr15:37284616-37284428 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 53, 20

Conread position: 875-1065
Cow position: chr15:26404443-26404255 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 148, 50

Conread position: 875-1087
Cow position: chr15:20487045-20487250 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 30

Conread position: 876-1074
Cow position: chr15:16823097-16822904 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 105, 0

Conread position: 877-1075
Cow position: chr15:17763066-17762871 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 20, 94

Conread position: 878-1047
Cow position: chr15:40415481-40415650 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 100, 46

Conread position: 878-1086
Cow position: chr15:4694903-4694696 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 103, 165

Conread position: 880-1061
Cow position: chr15:44237574-44237393 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 101, 45

Conread position: 881-1047
Cow position: chr15:52809428-52809592 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 82, 38

Conread position: 881-1075
Cow position: chr15:3695789-3695594 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 103, 108

Conread position: 881-1076
Cow position: chr15:36952045-36952240 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 23, 109

Conread position: 881-1087
Cow position: chr15:13395705-13395504 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 15

Conread position: 882-1072
Cow position: chr15:78727-78538 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 68, 100

Conread position: 884-1119
Cow position: chr15:32234179-32234402 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 135, 35

Conread position: 887-1074
Cow position: chr15:28038926-28038744 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 117

Conread position: 888-1089
Cow position: chr15:34751233-34751038 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 890-1081
Cow position: chr15:14281697-14281506 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 94, 188

Conread position: 894-1084
Cow position: chr15:40594360-40594553 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 895-1061
Cow position: chr15:30795124-30794956 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 92

Conread position: 895-1073
Cow position: chr15:34896902-34896726 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 86, 7

Conread position: 905-1074
Cow position: chr15:26851093-26851268 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 19

Conread position: 906-1107
Cow position: chr15:50333113-50332918 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 124

Conread position: 909-1081
Cow position: chr15:47843963-47844134 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 151

Conread position: 910-1075
Cow position: chr15:21903282-21903450 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 912-1088
Cow position: chr15:11912433-11912605 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 915-1088
Cow position: chr15:25650290-25650460 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 921-1082
Cow position: chr15:24982061-24982221 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 41, 130

Conread position: 922-1075
Cow position: chr15:9879261-9879420 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 925-1073
Cow position: chr15:49132171-49132022 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 947-1074
Cow position: chr15:34223957-34223827 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Show alignments to all cow chromosomes.