Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01A040044.5 |
| Conread position: | 848-1110 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 856-1075 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 53, 25 |
| Conread position: | 856-1096 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 11, 125 |
| Conread position: | 859-1070 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 67, 9 |
| Conread position: | 863-1076 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 122, 10 |
| Conread position: | 867-975 |
| Cow position: | |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 867-1021 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 45, 53 |
| Conread position: | 867-1021 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 115 |
| Conread position: | 867-1043 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 117, 42 |
| Conread position: | 867-1045 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 47, 60 |
| Conread position: | 867-1049 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 99, 51 |
| Conread position: | 867-1054 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 105, 37 |
| Conread position: | 867-1054 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 867-1058 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 117, 56 |
| Conread position: | 867-1061 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 57, 184 |
| Conread position: | 867-1066 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 117, 47 |
| Conread position: | 867-1069 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 111, 31 |
| Conread position: | 867-1070 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 114, 34 |
| Conread position: | 867-1074 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 116, 42 |
| Conread position: | 867-1074 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 111, 42 |
| Conread position: | 867-1075 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 97 |
| Conread position: | 867-1075 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 867-1075 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 867-1075 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 114, 32 |
| Conread position: | 867-1076 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 114, 159 |
| Conread position: | 867-1078 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 165 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 114, 19 |
| Conread position: | 867-1082 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 48, 115 |
| Conread position: | 867-1082 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 54, 110 |
| Conread position: | 867-1082 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 165 |
| Conread position: | 867-1082 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 114, 40 |
| Conread position: | 867-1083 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 114, 40 |
| Conread position: | 867-1084 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 117, 41 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 53, 86 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 211 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 117, 26 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 117 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 70, 42 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 104, 21 |
| Conread position: | 867-1102 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 867-1204 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 114, 20 |
| Conread position: | 868-1001 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 868-1047 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 123, 41 |
| Conread position: | 868-1075 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 151, 19 |
| Conread position: | 870-1021 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 115, 53 |
| Conread position: | 870-1047 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 49, 109 |
| Conread position: | 870-1047 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 111, 42 |
| Conread position: | 870-1060 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 157 |
| Conread position: | 870-1067 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 113, 46 |
| Conread position: | 870-1081 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 159 |
| Conread position: | 870-1081 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 870-1084 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 47, 65 |
| Conread position: | 870-1088 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 870-1090 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 108, 184 |
| Conread position: | 870-1095 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 115, 27 |
| Conread position: | 870-1107 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 114, 36 |
| Conread position: | 870-1108 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 37, 124 |
| Conread position: | 871-1054 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 871-1062 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 47, 167 |
| Conread position: | 871-1076 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 113, 38 |
| Conread position: | 871-1077 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 871-1082 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 40, 54 |
| Conread position: | 871-1082 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 47, 16 |
| Conread position: | 872-1066 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 872-1081 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 54, 40 |
| Conread position: | 872-1087 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 112, 29 |
| Conread position: | 874-1041 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 33, 7 |
| Conread position: | 874-1084 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 104, 67 |
| Conread position: | 874-1084 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 7, 44 |
| Conread position: | 874-1087 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 875-1062 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 875-1065 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 148, 50 |
| Conread position: | 875-1087 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 109, 30 |
| Conread position: | 876-1074 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 877-1075 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 878-1047 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 100, 46 |
| Conread position: | 878-1086 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 103, 165 |
| Conread position: | 880-1061 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 101, 45 |
| Conread position: | 881-1047 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 82, 38 |
| Conread position: | 881-1075 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 103, 108 |
| Conread position: | 881-1076 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 23, 109 |
| Conread position: | 881-1087 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 882-1072 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 68, 100 |
| Conread position: | 884-1119 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 135, 35 |
| Conread position: | 887-1074 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 94, 117 |
| Conread position: | 888-1089 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 890-1081 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 94, 188 |
| Conread position: | 894-1084 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 895-1061 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 92 |
| Conread position: | 895-1073 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 86, 7 |
| Conread position: | 905-1074 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 906-1107 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 124 |
| Conread position: | 909-1081 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 151 |
| Conread position: | 910-1075 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 912-1088 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 915-1088 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 921-1082 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 41, 130 |
| Conread position: | 922-1075 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 925-1073 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 947-1074 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
Show alignments to all cow chromosomes.