Cow genome map

Conread name: Ss1.1-Tra1-TCH01A040044.5

Conread position: 7-641
Cow position:
Alignm length: 645
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 45

Conread position: 858-1092
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 130, 15

Conread position: 867-1047
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 114, 140

Conread position: 867-1047
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 867-1054
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 114, 51

Conread position: 867-1061
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 59

Conread position: 867-1067
Cow position:
Alignm length: 202
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 114, 76

Conread position: 867-1071
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 119, 18

Conread position: 867-1073
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 41, 161

Conread position: 867-1073
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 186

Conread position: 867-1073
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 113, 20

Conread position: 867-1074
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 114, 56

Conread position: 867-1074
Cow position:
Alignm length: 210
Alignm identity: 155
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 48, 180

Conread position: 867-1074
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 114, 40

Conread position: 867-1075
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 117, 42

Conread position: 867-1075
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 114, 30

Conread position: 867-1075
Cow position:
Alignm length: 213
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 19

Conread position: 867-1075
Cow position:
Alignm length: 210
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 114, 52

Conread position: 867-1075
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 117, 14

Conread position: 867-1075
Cow position:
Alignm length: 210
Alignm identity: 141
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 114, 49

Conread position: 867-1076
Cow position:
Alignm length: 212
Alignm identity: 164
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 117, 42

Conread position: 867-1076
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 62

Conread position: 867-1076
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 54, 42

Conread position: 867-1076
Cow position:
Alignm length: 212
Alignm identity: 145
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 114, 0

Conread position: 867-1076
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 114, 0

Conread position: 867-1076
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 113, 49

Conread position: 867-1081
Cow position:
Alignm length: 219
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 40

Conread position: 867-1081
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 58

Conread position: 867-1081
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 48

Conread position: 867-1081
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 99, 52

Conread position: 867-1081
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 117, 42

Conread position: 867-1081
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 59, 214

Conread position: 867-1082
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 16

Conread position: 867-1082
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 50, 141

Conread position: 867-1082
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 114, 192

Conread position: 867-1085
Cow position:
Alignm length: 223
Alignm identity: 163
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 114, 28

Conread position: 867-1085
Cow position:
Alignm length: 223
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 867-1085
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 11

Conread position: 867-1085
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 74, 37

Conread position: 867-1087
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 114, 47

Conread position: 867-1087
Cow position:
Alignm length: 227
Alignm identity: 167
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 10, 183

Conread position: 867-1087
Cow position:
Alignm length: 221
Alignm identity: 172
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 55, 0

Conread position: 867-1087
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 156, 107

Conread position: 867-1087
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 114, 49

Conread position: 867-1087
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 115, 37

Conread position: 867-1087
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 114, 43

Conread position: 867-1088
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 117, 20

Conread position: 867-1088
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 117, 20

Conread position: 867-1088
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 117, 40

Conread position: 867-1088
Cow position:
Alignm length: 228
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 98, 48

Conread position: 867-1089
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 58

Conread position: 867-1089
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 117, 49

Conread position: 867-1089
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 117, 49

Conread position: 867-1096
Cow position:
Alignm length: 231
Alignm identity: 167
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 114, 26

Conread position: 868-1092
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 122, 39

Conread position: 869-1111
Cow position:
Alignm length: 247
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 113

Conread position: 870-1021
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 112

Conread position: 870-1060
Cow position:
Alignm length: 193
Alignm identity: 142
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 870-1061
Cow position:
Alignm length: 197
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 17

Conread position: 870-1064
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 111, 39

Conread position: 870-1067
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 101, 0

Conread position: 870-1071
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 50, 65

Conread position: 870-1074
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 111, 58

Conread position: 870-1074
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 88

Conread position: 870-1076
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 113, 27

Conread position: 870-1081
Cow position:
Alignm length: 213
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 44

Conread position: 870-1087
Cow position:
Alignm length: 219
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 37

Conread position: 870-1087
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 28

Conread position: 870-1092
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 42, 52

Conread position: 870-1098
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 66

Conread position: 870-1119
Cow position:
Alignm length: 251
Alignm identity: 169
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 208, 37

Conread position: 871-1076
Cow position:
Alignm length: 208
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 106, 45

Conread position: 871-1082
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 47, 35

Conread position: 871-1083
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 112, 158

Conread position: 872-1046
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 57

Conread position: 872-1072
Cow position:
Alignm length: 205
Alignm identity: 161
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 109, 44

Conread position: 872-1075
Cow position:
Alignm length: 205
Alignm identity: 146
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 109, 53

Conread position: 872-1075
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 36

Conread position: 872-1076
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 176, 28

Conread position: 872-1117
Cow position:
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 99, 40

Conread position: 873-1087
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 61, 43

Conread position: 874-1024
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 107, 7

Conread position: 874-1076
Cow position:
Alignm length: 205
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 182, 26

Conread position: 874-1140
Cow position:
Alignm length: 276
Alignm identity: 185
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 109

Conread position: 875-1075
Cow position:
Alignm length: 204
Alignm identity: 157
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 44, 19

Conread position: 875-1076
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 106, 41

Conread position: 875-1084
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 108, 33

Conread position: 877-1017
Cow position:
Alignm length: 143
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 877-1074
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 877-1095
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 94, 47

Conread position: 878-1081
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 103, 179

Conread position: 878-1084
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 57

Conread position: 880-1081
Cow position:
Alignm length: 203
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 104, 7

Conread position: 881-1074
Cow position:
Alignm length: 196
Alignm identity: 136
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 100, 78

Conread position: 881-1076
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 100, 148

Conread position: 881-1076
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 100, 0

Conread position: 882-1026
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 99, 34

Conread position: 882-1062
Cow position:
Alignm length: 182
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 85

Conread position: 882-1072
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 882-1075
Cow position:
Alignm length: 195
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 32, 102

Conread position: 882-1075
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 33, 22

Conread position: 882-1075
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 33, 27

Conread position: 882-1081
Cow position:
Alignm length: 208
Alignm identity: 158
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 44

Conread position: 882-1084
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 103

Conread position: 882-1086
Cow position:
Alignm length: 207
Alignm identity: 161
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 102, 27

Conread position: 882-1107
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 23

Conread position: 884-1075
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 97, 21

Conread position: 884-1076
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 15

Conread position: 884-1081
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 37, 147

Conread position: 884-1083
Cow position:
Alignm length: 203
Alignm identity: 155
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 97, 35

Conread position: 884-1087
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 28

Conread position: 886-1084
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 95, 52

Conread position: 887-1073
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 151

Conread position: 887-1096
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 101

Conread position: 888-1067
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 166

Conread position: 888-1120
Cow position:
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 21

Conread position: 889-1047
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 889-1104
Cow position:
Alignm length: 220
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 20, 38

Conread position: 890-1069
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 33, 26

Conread position: 890-1107
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 129, 94

Conread position: 894-1081
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 170

Conread position: 901-1087
Cow position:
Alignm length: 188
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 83, 29

Conread position: 905-1081
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 911-1076
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 916-1081
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 47

Conread position: 918-1086
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 63, 138

Conread position: 920-1083
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 110

Conread position: 922-1071
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 933-1076
Cow position:
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 123

Conread position: 937-1175
Cow position:
Alignm length: 241
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 141

Show alignments to all cow chromosomes.