Cow genome map

Conread name: Ss1.1-Tra1-TCH01A040044.5

Conread position: 846-1077
Cow position:
Alignm length: 233
Alignm identity: 160
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 135, 21

Conread position: 851-1054
Cow position:
Alignm length: 206
Alignm identity: 140
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 22, 135

Conread position: 858-1076
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 22

Conread position: 859-1071
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 122, 57

Conread position: 861-1087
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 158, 15

Conread position: 867-977
Cow position:
Alignm length: 115
Alignm identity: 94
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 867-1003
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 77

Conread position: 867-1037
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 114, 51

Conread position: 867-1054
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 152, 60

Conread position: 867-1059
Cow position:
Alignm length: 193
Alignm identity: 135
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 109, 0

Conread position: 867-1061
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 114, 20

Conread position: 867-1064
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 116, 46

Conread position: 867-1070
Cow position:
Alignm length: 206
Alignm identity: 157
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 117, 47

Conread position: 867-1071
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 117, 40

Conread position: 867-1072
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 53, 117

Conread position: 867-1073
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 152, 42

Conread position: 867-1074
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 48

Conread position: 867-1074
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 114, 46

Conread position: 867-1074
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 118, 42

Conread position: 867-1075
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 97

Conread position: 867-1075
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 98, 14

Conread position: 867-1075
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 51

Conread position: 867-1075
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 111, 42

Conread position: 867-1075
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 114, 41

Conread position: 867-1075
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 114, 57

Conread position: 867-1076
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 867-1076
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 114, 40

Conread position: 867-1076
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 117, 14

Conread position: 867-1076
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 24

Conread position: 867-1077
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 114, 42

Conread position: 867-1081
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 114, 38

Conread position: 867-1081
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 211, 56

Conread position: 867-1081
Cow position:
Alignm length: 219
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 40

Conread position: 867-1081
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 867-1081
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 114, 56

Conread position: 867-1081
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 133, 114

Conread position: 867-1081
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 116, 0

Conread position: 867-1081
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 193

Conread position: 867-1081
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 50

Conread position: 867-1081
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 125, 23

Conread position: 867-1082
Cow position:
Alignm length: 218
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 115, 181

Conread position: 867-1082
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 58

Conread position: 867-1082
Cow position:
Alignm length: 217
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 152, 49

Conread position: 867-1082
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 114, 161

Conread position: 867-1083
Cow position:
Alignm length: 219
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 42

Conread position: 867-1084
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 119, 58

Conread position: 867-1087
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 115

Conread position: 867-1087
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 114, 19

Conread position: 867-1087
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 61, 28

Conread position: 867-1088
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 47, 194

Conread position: 867-1088
Cow position:
Alignm length: 223
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 115, 45

Conread position: 867-1088
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 48, 57

Conread position: 867-1107
Cow position:
Alignm length: 245
Alignm identity: 184
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 47, 57

Conread position: 867-1112
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 116, 56

Conread position: 867-1119
Cow position:
Alignm length: 258
Alignm identity: 175
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 114, 40

Conread position: 868-1002
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 110, 0

Conread position: 868-1043
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 868-1070
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 868-1075
Cow position:
Alignm length: 209
Alignm identity: 159
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 48, 58

Conread position: 868-1084
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 151, 29

Conread position: 868-1087
Cow position:
Alignm length: 223
Alignm identity: 166
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 80, 212

Conread position: 869-1051
Cow position:
Alignm length: 187
Alignm identity: 147
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 44, 37

Conread position: 869-1086
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 112, 162

Conread position: 870-1013
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 108, 46

Conread position: 870-1060
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 108, 53

Conread position: 870-1067
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 102, 53

Conread position: 870-1069
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 114, 167

Conread position: 870-1074
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 113, 39

Conread position: 870-1075
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 50, 109

Conread position: 870-1075
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 111, 186

Conread position: 870-1076
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 46

Conread position: 870-1081
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 56

Conread position: 870-1084
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 111, 37

Conread position: 870-1084
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 6, 97

Conread position: 870-1087
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 136, 109

Conread position: 870-1087
Cow position:
Alignm length: 220
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 114, 53

Conread position: 870-1088
Cow position:
Alignm length: 221
Alignm identity: 152
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 44, 209

Conread position: 870-1092
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 114, 57

Conread position: 870-1095
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 57, 112

Conread position: 870-1095
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 111, 28

Conread position: 870-1105
Cow position:
Alignm length: 240
Alignm identity: 170
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 43, 190

Conread position: 871-1063
Cow position:
Alignm length: 196
Alignm identity: 134
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 871-1074
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 104

Conread position: 871-1074
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 110, 22

Conread position: 871-1076
Cow position:
Alignm length: 208
Alignm identity: 160
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 46, 24

Conread position: 871-1076
Cow position:
Alignm length: 208
Alignm identity: 160
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 42, 24

Conread position: 871-1084
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 141

Conread position: 872-979
Cow position:
Alignm length: 109
Alignm identity: 91
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 872-1021
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 113

Conread position: 872-1075
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 872-1081
Cow position:
Alignm length: 214
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 112, 158

Conread position: 873-1040
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 104, 35

Conread position: 873-1081
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 105, 43

Conread position: 873-1081
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 137

Conread position: 873-1081
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 33, 44

Conread position: 874-1075
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 24

Conread position: 874-1087
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 145, 20

Conread position: 875-1072
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 106, 40

Conread position: 875-1074
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 46, 153

Conread position: 875-1086
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 120

Conread position: 877-1047
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 106, 46

Conread position: 877-1074
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 37, 192

Conread position: 881-1071
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 99, 173

Conread position: 881-1081
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 881-1087
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 100, 188

Conread position: 882-1074
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 882-1075
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 882-1075
Cow position:
Alignm length: 196
Alignm identity: 151
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 86, 37

Conread position: 882-1076
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 182

Conread position: 882-1081
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 196, 62

Conread position: 882-1081
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 196, 62

Conread position: 882-1087
Cow position:
Alignm length: 207
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 884-1081
Cow position:
Alignm length: 200
Alignm identity: 112
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 100, 166

Conread position: 887-1073
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 159, 119

Conread position: 887-1076
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 39, 142

Conread position: 889-1064
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 89, 6

Conread position: 889-1088
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 95, 23

Conread position: 898-1092
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 9

Conread position: 899-1045
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 24

Conread position: 900-1081
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 16

Conread position: 904-1065
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 11

Conread position: 907-1082
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 16

Conread position: 912-1047
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 72, 13

Conread position: 912-1107
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 69, 10

Conread position: 914-1047
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 916-1074
Cow position:
Alignm length: 160
Alignm identity: 128
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 65, 143

Conread position: 917-1081
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 160, 65

Conread position: 918-1060
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 109

Conread position: 918-1081
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 919-1044
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 920-1081
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 61, 137

Conread position: 925-1104
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 56, 45

Conread position: 926-1084
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 8

Conread position: 929-1075
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.