Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01A040044.5 |
| Conread position: | 864-1047 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 68 |
| Conread position: | 866-1076 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 118, 72 |
| Conread position: | 867-1004 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 62, 42 |
| Conread position: | 867-1021 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 867-1046 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 52 |
| Conread position: | 867-1047 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 114, 56 |
| Conread position: | 867-1047 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 867-1047 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 114, 54 |
| Conread position: | 867-1047 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 114, 72 |
| Conread position: | 867-1051 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 867-1054 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 55, 14 |
| Conread position: | 867-1054 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 46, 58 |
| Conread position: | 867-1054 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 867-1055 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 114, 35 |
| Conread position: | 867-1058 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 180, 56 |
| Conread position: | 867-1061 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 47, 115 |
| Conread position: | 867-1061 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 111, 24 |
| Conread position: | 867-1062 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 114, 34 |
| Conread position: | 867-1066 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 74 |
| Conread position: | 867-1067 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 867-1071 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 114, 24 |
| Conread position: | 867-1072 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 48, 37 |
| Conread position: | 867-1074 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 47, 73 |
| Conread position: | 867-1075 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 33, 57 |
| Conread position: | 867-1075 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 152, 42 |
| Conread position: | 867-1076 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 42, 50 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 114, 14 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 53, 132 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 62, 115 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 114, 183 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 52, 147 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 111, 179 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 53, 131 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 867-1082 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 117, 40 |
| Conread position: | 867-1086 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 114, 36 |
| Conread position: | 867-1086 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 114, 41 |
| Conread position: | 867-1086 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 114, 48 |
| Conread position: | 867-1087 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 867-1087 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 114, 49 |
| Conread position: | 867-1087 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 44, 53 |
| Conread position: | 867-1087 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 114, 164 |
| Conread position: | 867-1087 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 114, 47 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 115, 42 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 40, 91 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 33, 59 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 114, 37 |
| Conread position: | 867-1090 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 111, 39 |
| Conread position: | 867-1093 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 867-1103 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 49 |
| Conread position: | 867-1160 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 868-1039 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 868-1066 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 94, 51 |
| Conread position: | 868-1075 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 45 |
| Conread position: | 868-1075 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 113, 54 |
| Conread position: | 869-1024 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 870-1047 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 111, 38 |
| Conread position: | 870-1067 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 54 |
| Conread position: | 870-1075 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 122, 130 |
| Conread position: | 870-1076 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 54 |
| Conread position: | 870-1087 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 114, 46 |
| Conread position: | 870-1089 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 56, 206 |
| Conread position: | 871-1047 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 871-1054 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 871-1081 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 113, 34 |
| Conread position: | 871-1086 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 111, 44 |
| Conread position: | 871-1087 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 110, 48 |
| Conread position: | 872-1037 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 872-1061 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 874-1075 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 171, 42 |
| Conread position: | 874-1081 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 93, 110 |
| Conread position: | 874-1087 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 110, 21 |
| Conread position: | 874-1096 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 107, 157 |
| Conread position: | 875-1071 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 44, 97 |
| Conread position: | 878-1060 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 35, 28 |
| Conread position: | 881-1061 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 103, 42 |
| Conread position: | 881-1074 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 100, 38 |
| Conread position: | 882-1017 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 101, 34 |
| Conread position: | 882-1073 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 885-1081 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 886-1040 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 95, 7 |
| Conread position: | 888-1081 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 892-1109 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 25, 93 |
| Conread position: | 894-1082 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 904-1074 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 13, 125 |
| Conread position: | 910-1073 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 138, 13 |
| Conread position: | 912-1073 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 72, 31 |
| Conread position: | 914-1085 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 7, 83 |
| Conread position: | 915-1063 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 5, 113 |
| Conread position: | 916-1081 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 68, 110 |
| Conread position: | 922-1076 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 56, 10 |
Show alignments to all cow chromosomes.