Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01A040044.5 |
| Conread position: | 851-1073 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 131, 35 |
| Conread position: | 851-1076 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 72 |
| Conread position: | 865-1071 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 13, 196 |
| Conread position: | 866-1063 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 867-979 |
| Cow position: | |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 867-1041 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 867-1047 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 867-1051 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 867-1054 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 81 |
| Conread position: | 867-1057 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 114, 38 |
| Conread position: | 867-1061 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 867-1061 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 117, 39 |
| Conread position: | 867-1066 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 113, 49 |
| Conread position: | 867-1068 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 53, 113 |
| Conread position: | 867-1069 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 115, 55 |
| Conread position: | 867-1071 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 51, 15 |
| Conread position: | 867-1071 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 158 |
| Conread position: | 867-1071 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 867-1072 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 42 |
| Conread position: | 867-1072 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 48, 57 |
| Conread position: | 867-1073 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 196, 38 |
| Conread position: | 867-1074 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 114, 41 |
| Conread position: | 867-1074 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 114, 55 |
| Conread position: | 867-1074 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 48, 191 |
| Conread position: | 867-1075 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 106, 49 |
| Conread position: | 867-1076 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 128, 50 |
| Conread position: | 867-1076 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 49, 178 |
| Conread position: | 867-1076 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 69, 193 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 57 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 115, 100 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 47, 42 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 45, 62 |
| Conread position: | 867-1082 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 156, 52 |
| Conread position: | 867-1083 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 867-1084 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 105, 15 |
| Conread position: | 867-1084 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 867-1087 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 54, 15 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 45, 14 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 45, 115 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 20 |
| Conread position: | 867-1096 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 99, 40 |
| Conread position: | 868-1093 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 44, 58 |
| Conread position: | 869-1063 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 870-1054 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 149, 157 |
| Conread position: | 870-1081 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 111, 9 |
| Conread position: | 870-1081 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 114, 64 |
| Conread position: | 870-1081 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 48, 183 |
| Conread position: | 870-1083 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 161 |
| Conread position: | 870-1086 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 186, 35 |
| Conread position: | 870-1087 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 45, 196 |
| Conread position: | 870-1088 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 870-1098 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 110, 38 |
| Conread position: | 871-1062 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 93, 34 |
| Conread position: | 871-1072 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 871-1075 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 148 |
| Conread position: | 871-1081 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 49, 83 |
| Conread position: | 872-1054 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 9 |
| Conread position: | 872-1081 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 109, 187 |
| Conread position: | 872-1085 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 24, 137 |
| Conread position: | 872-1088 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 109, 169 |
| Conread position: | 872-1089 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 112, 44 |
| Conread position: | 873-1047 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 106 |
| Conread position: | 873-1084 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 29, 135 |
| Conread position: | 873-1114 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 108, 50 |
| Conread position: | 874-1047 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 874-1070 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 874-1070 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 44, 72 |
| Conread position: | 874-1088 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 51, 34 |
| Conread position: | 875-1075 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 66 |
| Conread position: | 875-1085 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 876-1057 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 876-1067 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 876-1071 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 44, 142 |
| Conread position: | 876-1075 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 48 |
| Conread position: | 876-1093 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 98, 39 |
| Conread position: | 877-1075 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 39, 131 |
| Conread position: | 877-1075 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 107, 39 |
| Conread position: | 878-1075 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 878-1084 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 103, 38 |
| Conread position: | 878-1087 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 31, 176 |
| Conread position: | 881-1063 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 6, 102 |
| Conread position: | 881-1075 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 881-1081 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 882-1018 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 99, 43 |
| Conread position: | 882-1070 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 146 |
| Conread position: | 882-1075 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 882-1075 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 34 |
| Conread position: | 882-1075 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 882-1110 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 38, 100 |
| Conread position: | 897-1093 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 30, 12 |
| Conread position: | 902-1081 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 82, 72 |
| Conread position: | 905-1088 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 154 |
| Conread position: | 907-1102 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 7, 174 |
| Conread position: | 914-1081 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 75 |
| Conread position: | 915-1076 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 66, 54 |
| Conread position: | 916-1087 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 12 |
| Conread position: | 916-1088 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 7 |
| Conread position: | 918-1075 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 111 |
| Conread position: | 920-1088 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 69 |
| Conread position: | 924-1087 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 133 |
| Conread position: | 925-1092 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 928-1107 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 55, 170 |
| Conread position: | 931-1081 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 106 |
| Conread position: | 934-1081 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 50, 125 |
| Conread position: | 942-1075 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.