Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01A040044.5 |
| Conread position: | 854-1088 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 112, 66 |
| Conread position: | 856-1083 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 116, 227 |
| Conread position: | 858-1063 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 865-1058 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 43, 9 |
| Conread position: | 865-1088 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 161 |
| Conread position: | 867-1004 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 867-1014 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 114, 49 |
| Conread position: | 867-1021 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 867-1023 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 111, 152 |
| Conread position: | 867-1046 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 40, 158 |
| Conread position: | 867-1047 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 48, 65 |
| Conread position: | 867-1062 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 867-1063 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 189, 42 |
| Conread position: | 867-1066 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 867-1070 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 867-1071 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 114, 28 |
| Conread position: | 867-1072 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 58 |
| Conread position: | 867-1072 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 141 |
| Conread position: | 867-1073 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 114, 42 |
| Conread position: | 867-1074 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 867-1075 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 156, 42 |
| Conread position: | 867-1076 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 111, 13 |
| Conread position: | 867-1076 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 51, 22 |
| Conread position: | 867-1076 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 200, 30 |
| Conread position: | 867-1076 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 62, 56 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 114, 140 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 57, 120 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 111, 47 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 55, 20 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 117, 49 |
| Conread position: | 867-1084 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 117, 56 |
| Conread position: | 867-1086 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 114, 49 |
| Conread position: | 867-1087 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 111, 14 |
| Conread position: | 867-1096 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 867-1103 |
| Cow position: | |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 107, 28 |
| Conread position: | 867-1106 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 114, 161 |
| Conread position: | 867-1110 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 155, 40 |
| Conread position: | 868-1068 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 48, 12 |
| Conread position: | 869-1096 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 61, 153 |
| Conread position: | 870-1052 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 870-1072 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 43, 112 |
| Conread position: | 870-1074 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 111, 11 |
| Conread position: | 870-1075 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 111, 157 |
| Conread position: | 870-1076 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 870-1076 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 42, 29 |
| Conread position: | 870-1087 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 111, 37 |
| Conread position: | 870-1087 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 56 |
| Conread position: | 870-1090 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 114, 39 |
| Conread position: | 870-1095 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 115, 37 |
| Conread position: | 870-1097 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 111, 156 |
| Conread position: | 870-1107 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 110, 14 |
| Conread position: | 871-1069 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 104 |
| Conread position: | 871-1075 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 871-1080 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 93, 126 |
| Conread position: | 871-1081 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 206, 15 |
| Conread position: | 871-1088 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 113, 36 |
| Conread position: | 872-1076 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 47, 200 |
| Conread position: | 872-1085 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 191, 47 |
| Conread position: | 873-1046 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 108, 161 |
| Conread position: | 873-1075 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 54, 36 |
| Conread position: | 873-1076 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 874-1049 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 40, 55 |
| Conread position: | 874-1074 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 874-1087 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 107, 135 |
| Conread position: | 874-1088 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 42, 12 |
| Conread position: | 874-1088 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 34 |
| Conread position: | 875-1071 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 106, 34 |
| Conread position: | 876-1069 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 876-1076 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 877-1087 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 104, 120 |
| Conread position: | 878-1073 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 881-1047 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 39, 94 |
| Conread position: | 881-1087 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 28, 106 |
| Conread position: | 882-1074 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 99, 85 |
| Conread position: | 882-1075 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 26, 155 |
| Conread position: | 882-1084 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 30, 42 |
| Conread position: | 887-1087 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 131, 28 |
| Conread position: | 888-1075 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 21 |
| Conread position: | 892-1095 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 86, 17 |
| Conread position: | 895-1060 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 912-1075 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 107, 10 |
| Conread position: | 912-1082 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 151, 15 |
| Conread position: | 920-1073 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 920-1081 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 63, 139 |
| Conread position: | 941-1088 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 43, 48 |
| Conread position: | 945-1081 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 40, 105 |
Show alignments to all cow chromosomes.