Cow genome map
Conread name: | Ss1.1-Tra1-TCH01A040044.5 |
Conread position: | 854-1088 |
Cow position: | chr24:41405780-41406009 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 162 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 112, 66 |
Conread position: | 856-1083 |
Cow position: | chr24:230161-230393 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 172 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 116, 227 |
Conread position: | 858-1063 |
Cow position: | chr24:28319325-28319118 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 143 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 865-1058 |
Cow position: | chr24:175602-175409 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 142 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 43, 9 |
Conread position: | 865-1088 |
Cow position: | chr24:30308663-30308441 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 165 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 56, 161 |
Conread position: | 867-1004 |
Cow position: | chr24:6487813-6487948 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 106 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 867-1014 |
Cow position: | chr24:3430629-3430775 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 114 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 114, 49 |
Conread position: | 867-1021 |
Cow position: | chr24:211881-212036 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 117 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 54, 45 |
Conread position: | 867-1023 |
Cow position: | chr24:36404248-36404092 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 111, 152 |
Conread position: | 867-1046 |
Cow position: | chr24:31324178-31324358 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 128 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 40, 158 |
Conread position: | 867-1047 |
Cow position: | chr24:19736439-19736259 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 132 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 48, 65 |
Conread position: | 867-1062 |
Cow position: | chr24:37037793-37037992 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 151 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 867-1063 |
Cow position: | chr24:29063758-29063567 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 148 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 189, 42 |
Conread position: | 867-1066 |
Cow position: | chr24:27726119-27725918 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 142 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 867-1070 |
Cow position: | chr24:15246748-15246545 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 151 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 50, 24 |
Conread position: | 867-1071 |
Cow position: | chr24:35675441-35675635 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 146 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 114, 28 |
Conread position: | 867-1072 |
Cow position: | chr24:17860365-17860159 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 148 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 45, 58 |
Conread position: | 867-1072 |
Cow position: | chr24:27608205-27608008 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 154 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 56, 141 |
Conread position: | 867-1073 |
Cow position: | chr24:2402472-2402267 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 153 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 114, 42 |
Conread position: | 867-1074 |
Cow position: | chr24:15057297-15057496 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 143 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 867-1075 |
Cow position: | chr24:39849991-39849786 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 145 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 156, 42 |
Conread position: | 867-1076 |
Cow position: | chr24:5754734-5754937 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 159 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 111, 13 |
Conread position: | 867-1076 |
Cow position: | chr24:18357158-18356950 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 156 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 51, 22 |
Conread position: | 867-1076 |
Cow position: | chr24:28233945-28234147 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 149 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 200, 30 |
Conread position: | 867-1076 |
Cow position: | chr24:29561678-29561471 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 146 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 51, 14 |
Conread position: | 867-1081 |
Cow position: | chr24:17104676-17104460 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 153 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 62, 56 |
Conread position: | 867-1081 |
Cow position: | chr24:20874576-20874789 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 157 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 114, 140 |
Conread position: | 867-1081 |
Cow position: | chr24:30235763-30235981 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 160 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 57, 120 |
Conread position: | 867-1081 |
Cow position: | chr24:31359220-31359427 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 154 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 111, 47 |
Conread position: | 867-1081 |
Cow position: | chr24:37975085-37974875 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 164 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 55, 20 |
Conread position: | 867-1081 |
Cow position: | chr24:39523551-39523341 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 149 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 117, 49 |
Conread position: | 867-1084 |
Cow position: | chr24:33153672-33153888 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 152 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 117, 56 |
Conread position: | 867-1086 |
Cow position: | chr24:19769384-19769606 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 155 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 114, 49 |
Conread position: | 867-1087 |
Cow position: | chr24:28990459-28990671 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 157 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 111, 14 |
Conread position: | 867-1096 |
Cow position: | chr24:23187025-23186792 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 163 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 867-1103 |
Cow position: | chr24:28062848-28063078 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 176 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 107, 28 |
Conread position: | 867-1106 |
Cow position: | chr24:39791435-39791675 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 181 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 114, 161 |
Conread position: | 867-1110 |
Cow position: | chr24:17955545-17955310 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 168 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 155, 40 |
Conread position: | 868-1068 |
Cow position: | chr24:6131976-6131775 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 147 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 48, 12 |
Conread position: | 869-1096 |
Cow position: | chr24:37650569-37650792 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 165 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 61, 153 |
Conread position: | 870-1052 |
Cow position: | chr24:39483376-39483556 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 130 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 870-1072 |
Cow position: | chr24:25885262-25885061 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 151 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 43, 112 |
Conread position: | 870-1074 |
Cow position: | chr24:31812088-31812292 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 146 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 111, 11 |
Conread position: | 870-1075 |
Cow position: | chr24:27713508-27713302 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 150 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 111, 157 |
Conread position: | 870-1076 |
Cow position: | chr24:28496684-28496479 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 154 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 56, 24 |
Conread position: | 870-1076 |
Cow position: | chr24:30314130-30313924 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 158 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 42, 29 |
Conread position: | 870-1087 |
Cow position: | chr24:15373306-15373517 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 151 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 111, 37 |
Conread position: | 870-1087 |
Cow position: | chr24:29673419-29673636 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 151 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 36, 56 |
Conread position: | 870-1090 |
Cow position: | chr24:5141843-5142058 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 164 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 114, 39 |
Conread position: | 870-1095 |
Cow position: | chr24:18741671-18741449 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 159 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 115, 37 |
Conread position: | 870-1097 |
Cow position: | chr24:33222043-33221820 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 159 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 111, 156 |
Conread position: | 870-1107 |
Cow position: | chr24:24457346-24457117 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 161 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 110, 14 |
Conread position: | 871-1069 |
Cow position: | chr24:24250628-24250819 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 143 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 57, 104 |
Conread position: | 871-1075 |
Cow position: | chr24:1269692-1269885 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 159 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 871-1080 |
Cow position: | chr24:10499112-10499326 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 153 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 93, 126 |
Conread position: | 871-1081 |
Cow position: | chr24:17311317-17311115 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 158 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 206, 15 |
Conread position: | 871-1088 |
Cow position: | chr24:24662230-24662014 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 150 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 113, 36 |
Conread position: | 872-1076 |
Cow position: | chr24:28042873-28043079 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 157 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 47, 200 |
Conread position: | 872-1085 |
Cow position: | chr24:35150423-35150633 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 147 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 191, 47 |
Conread position: | 873-1046 |
Cow position: | chr24:30897636-30897464 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 133 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 108, 161 |
Conread position: | 873-1075 |
Cow position: | chr24:3165718-3165922 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 139 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 54, 36 |
Conread position: | 873-1076 |
Cow position: | chr24:31816478-31816682 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 146 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 874-1049 |
Cow position: | chr24:24755346-24755524 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 128 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 40, 55 |
Conread position: | 874-1074 |
Cow position: | chr24:24491115-24490916 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 148 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 44, 52 |
Conread position: | 874-1087 |
Cow position: | chr24:28303464-28303253 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 151 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 107, 135 |
Conread position: | 874-1088 |
Cow position: | chr24:6912463-6912251 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 163 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 42, 12 |
Conread position: | 874-1088 |
Cow position: | chr24:34008673-34008460 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 150 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 45, 34 |
Conread position: | 875-1071 |
Cow position: | chr24:37823432-37823626 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 156 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 106, 34 |
Conread position: | 876-1069 |
Cow position: | chr24:4710341-4710152 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 143 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 876-1076 |
Cow position: | chr24:14457818-14457622 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 153 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 877-1087 |
Cow position: | chr24:13948027-13948233 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 151 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 104, 120 |
Conread position: | 878-1073 |
Cow position: | chr24:20364503-20364311 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 148 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 44, 20 |
Conread position: | 881-1047 |
Cow position: | chr24:201730-201562 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 124 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 39, 94 |
Conread position: | 881-1087 |
Cow position: | chr24:27349270-27349063 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 155 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 28, 106 |
Conread position: | 882-1074 |
Cow position: | chr24:43028419-43028227 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 139 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 99, 85 |
Conread position: | 882-1075 |
Cow position: | chr24:15288731-15288931 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 148 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 26, 155 |
Conread position: | 882-1084 |
Cow position: | chr24:11887069-11887268 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 147 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 30, 42 |
Conread position: | 887-1087 |
Cow position: | chr24:27284736-27284933 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 153 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 131, 28 |
Conread position: | 888-1075 |
Cow position: | chr24:27844613-27844425 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 137 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 32, 21 |
Conread position: | 892-1095 |
Cow position: | chr24:18474808-18474613 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 149 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 86, 17 |
Conread position: | 895-1060 |
Cow position: | chr24:27824382-27824550 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 120 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 912-1075 |
Cow position: | chr24:5360659-5360819 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 120 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 107, 10 |
Conread position: | 912-1082 |
Cow position: | chr24:42981818-42981650 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 125 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 151, 15 |
Conread position: | 920-1073 |
Cow position: | chr24:17375585-17375740 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 112 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 920-1081 |
Cow position: | chr24:22133118-22133277 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 122 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 63, 139 |
Conread position: | 941-1088 |
Cow position: | chr24:29539961-29539814 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 111 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 43, 48 |
Conread position: | 945-1081 |
Cow position: | chr24:3412655-3412790 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 110 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 40, 105 |
Show alignments to all cow chromosomes.