Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01A040044.5 |
| Conread position: | 856-1047 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 64 |
| Conread position: | 857-1088 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 10, 43 |
| Conread position: | 865-1075 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 114, 67 |
| Conread position: | 867-1001 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 867-1018 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 867-1034 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 149, 114 |
| Conread position: | 867-1047 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 114, 20 |
| Conread position: | 867-1049 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 867-1050 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 867-1054 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 164 |
| Conread position: | 867-1059 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 867-1060 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 114, 49 |
| Conread position: | 867-1061 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 867-1071 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 111, 31 |
| Conread position: | 867-1071 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 52, 113 |
| Conread position: | 867-1072 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 59 |
| Conread position: | 867-1072 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 114, 41 |
| Conread position: | 867-1074 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 70, 14 |
| Conread position: | 867-1075 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 116, 40 |
| Conread position: | 867-1075 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 54, 49 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 152, 38 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 114, 192 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 23, 189 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 59, 154 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 48 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 111, 52 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 114, 192 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 116, 49 |
| Conread position: | 867-1086 |
| Cow position: | |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 39, 167 |
| Conread position: | 867-1086 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 867-1087 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 61 |
| Conread position: | 867-1087 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 34, 60 |
| Conread position: | 867-1087 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 114, 42 |
| Conread position: | 867-1087 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 867-1087 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 114, 19 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 117, 56 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 114, 160 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 114, 39 |
| Conread position: | 867-1112 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 40, 132 |
| Conread position: | 868-980 |
| Cow position: | |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 868-1087 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 151, 115 |
| Conread position: | 870-1063 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 111, 34 |
| Conread position: | 870-1071 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 111, 20 |
| Conread position: | 870-1075 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 111, 186 |
| Conread position: | 870-1075 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 153, 79 |
| Conread position: | 870-1075 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 113, 74 |
| Conread position: | 870-1076 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 870-1081 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 88, 106 |
| Conread position: | 870-1081 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 40, 161 |
| Conread position: | 870-1082 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 113, 186 |
| Conread position: | 870-1086 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 40 |
| Conread position: | 870-1087 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 207, 43 |
| Conread position: | 870-1088 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 114, 45 |
| Conread position: | 870-1094 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 117, 44 |
| Conread position: | 871-972 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 871-1076 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 56, 158 |
| Conread position: | 871-1088 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 43, 55 |
| Conread position: | 871-1092 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 66 |
| Conread position: | 872-1047 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 109, 45 |
| Conread position: | 872-1072 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 112, 13 |
| Conread position: | 872-1087 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 35, 158 |
| Conread position: | 873-994 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 55, 61 |
| Conread position: | 873-1072 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 37, 166 |
| Conread position: | 874-1072 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 38, 155 |
| Conread position: | 874-1087 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 41, 161 |
| Conread position: | 874-1107 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 17, 209 |
| Conread position: | 875-1061 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 876-1047 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 105, 32 |
| Conread position: | 877-1081 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 104, 39 |
| Conread position: | 877-1085 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 104, 32 |
| Conread position: | 878-1070 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 103, 130 |
| Conread position: | 881-1058 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 100, 28 |
| Conread position: | 881-1081 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 100, 36 |
| Conread position: | 882-1074 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 99, 39 |
| Conread position: | 882-1081 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 96, 148 |
| Conread position: | 883-1081 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 177 |
| Conread position: | 883-1088 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 100, 84 |
| Conread position: | 884-1069 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 100, 113 |
| Conread position: | 884-1087 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 171, 110 |
| Conread position: | 900-1081 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 124 |
| Conread position: | 907-1072 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 910-1087 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 73, 13 |
| Conread position: | 911-1081 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 14 |
| Conread position: | 912-1133 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 913-1087 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 913-1110 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 117 |
| Conread position: | 914-1073 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 918-1075 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 67, 139 |
| Conread position: | 919-1099 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 109 |
| Conread position: | 920-1074 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 920-1088 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 61, 136 |
| Conread position: | 934-1088 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 93 |
Show alignments to all cow chromosomes.