Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01A040044.5 |
| Conread position: | 855-1076 |
| Cow position: | chr26:28423213-28423431 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 126, 17 |
| Conread position: | 857-1088 |
| Cow position: | chr26:19774374-19774140 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 858-1075 |
| Cow position: | chr26:23315698-23315918 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 858-1084 |
| Cow position: | chr26:20291766-20291540 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 860-1113 |
| Cow position: | chr26:22033412-22033661 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 121, 172 |
| Conread position: | 866-1074 |
| Cow position: | chr26:19591417-19591628 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 867-1021 |
| Cow position: | chr26:32897934-32897779 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 867-1059 |
| Cow position: | chr26:21637103-21636910 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 54, 180 |
| Conread position: | 867-1061 |
| Cow position: | chr26:20769786-20769981 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 867-1068 |
| Cow position: | chr26:14481616-14481417 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 114, 45 |
| Conread position: | 867-1070 |
| Cow position: | chr26:12145183-12144979 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 42, 53 |
| Conread position: | 867-1070 |
| Cow position: | chr26:20825172-20824981 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 867-1070 |
| Cow position: | chr26:26950515-26950319 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 152, 103 |
| Conread position: | 867-1073 |
| Cow position: | chr26:13802050-13802253 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 867-1081 |
| Cow position: | chr26:647789-647573 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 867-1081 |
| Cow position: | chr26:17148641-17148849 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 73 |
| Conread position: | 867-1081 |
| Cow position: | chr26:33736616-33736406 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 116, 42 |
| Conread position: | 867-1084 |
| Cow position: | chr26:678042-677830 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 117, 9 |
| Conread position: | 867-1084 |
| Cow position: | chr26:13021208-13020993 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 114, 46 |
| Conread position: | 867-1086 |
| Cow position: | chr26:19446062-19446284 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 867-1087 |
| Cow position: | chr26:24240613-24240834 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 53, 212 |
| Conread position: | 867-1088 |
| Cow position: | chr26:8700110-8699898 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 114, 49 |
| Conread position: | 867-1088 |
| Cow position: | chr26:12964759-12964543 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 867-1088 |
| Cow position: | chr26:31605343-31605560 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 48, 57 |
| Conread position: | 867-1095 |
| Cow position: | chr26:27491564-27491339 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 54, 115 |
| Conread position: | 869-1076 |
| Cow position: | chr26:8307585-8307383 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 115, 40 |
| Conread position: | 870-1047 |
| Cow position: | chr26:34847682-34847860 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 108, 162 |
| Conread position: | 870-1075 |
| Cow position: | chr26:26888193-26887991 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 111, 39 |
| Conread position: | 870-1076 |
| Cow position: | chr26:35704324-35704527 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 12, 55 |
| Conread position: | 871-1076 |
| Cow position: | chr26:28251091-28251300 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 49, 199 |
| Conread position: | 871-1081 |
| Cow position: | chr26:23924788-23925001 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 872-1071 |
| Cow position: | chr26:31137512-31137328 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 147, 36 |
| Conread position: | 872-1073 |
| Cow position: | chr26:26537584-26537377 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 44, 55 |
| Conread position: | 872-1095 |
| Cow position: | chr26:7687298-7687086 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 109, 35 |
| Conread position: | 874-1054 |
| Cow position: | chr26:32652790-32652611 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 107, 49 |
| Conread position: | 874-1076 |
| Cow position: | chr26:33202125-33201925 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 107, 38 |
| Conread position: | 874-1088 |
| Cow position: | chr26:33392336-33392550 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 17, 65 |
| Conread position: | 875-1075 |
| Cow position: | chr26:16783767-16783971 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 105, 156 |
| Conread position: | 875-1081 |
| Cow position: | chr26:22892502-22892298 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 106, 184 |
| Conread position: | 876-1026 |
| Cow position: | chr26:18651688-18651541 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 92, 40 |
| Conread position: | 876-1076 |
| Cow position: | chr26:23583000-23582801 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 101, 47 |
| Conread position: | 877-1075 |
| Cow position: | chr26:19110130-19110326 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 101, 31 |
| Conread position: | 881-1061 |
| Cow position: | chr26:12940356-12940530 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 100, 17 |
| Conread position: | 881-1081 |
| Cow position: | chr26:34724930-34724725 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 34, 99 |
| Conread position: | 882-1061 |
| Cow position: | chr26:9491876-9492052 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 882-1061 |
| Cow position: | chr26:18741108-18740927 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 146 |
| Conread position: | 883-979 |
| Cow position: | chr26:5307094-5307190 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 883-1088 |
| Cow position: | chr26:14175234-14175437 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 101, 33 |
| Conread position: | 884-1088 |
| Cow position: | chr26:32863714-32863513 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 183, 112 |
| Conread position: | 887-1081 |
| Cow position: | chr26:5836863-5836668 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 94, 24 |
| Conread position: | 889-1081 |
| Cow position: | chr26:19636249-19636443 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 93, 191 |
| Conread position: | 897-1088 |
| Cow position: | chr26:7212621-7212427 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 68, 164 |
| Conread position: | 898-1087 |
| Cow position: | chr26:7314586-7314778 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 20, 160 |
| Conread position: | 906-1088 |
| Cow position: | chr26:34154110-34154290 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 78, 17 |
| Conread position: | 908-1075 |
| Cow position: | chr26:34611205-34611038 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 73, 142 |
| Conread position: | 911-1075 |
| Cow position: | chr26:1328877-1328715 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 125 |
| Conread position: | 927-1086 |
| Cow position: | chr26:33241884-33242041 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 57, 130 |
Show alignments to all cow chromosomes.