Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01A040044.5 |
| Conread position: | 849-1077 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 8, 115 |
| Conread position: | 855-1021 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 9 |
| Conread position: | 855-1114 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 857-1081 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 857-1081 |
| Cow position: | |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 859-1074 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 71 |
| Conread position: | 865-1061 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 60, 119 |
| Conread position: | 867-1004 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 52, 42 |
| Conread position: | 867-1014 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 117, 45 |
| Conread position: | 867-1034 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 867-1034 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 42 |
| Conread position: | 867-1047 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 114, 46 |
| Conread position: | 867-1054 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 867-1058 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 867-1062 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 39, 62 |
| Conread position: | 867-1062 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 114, 51 |
| Conread position: | 867-1062 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 867-1072 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 115, 190 |
| Conread position: | 867-1072 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 867-1072 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 115 |
| Conread position: | 867-1075 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 867-1075 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 107, 28 |
| Conread position: | 867-1076 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 200, 32 |
| Conread position: | 867-1076 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 54, 121 |
| Conread position: | 867-1076 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 867-1076 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 93, 36 |
| Conread position: | 867-1077 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 48, 195 |
| Conread position: | 867-1081 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 196, 48 |
| Conread position: | 867-1082 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 867-1086 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 54, 121 |
| Conread position: | 867-1087 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 867-1087 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 48, 117 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 152, 47 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 114, 182 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 17, 29 |
| Conread position: | 867-1088 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 135 |
| Conread position: | 867-1100 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 12 |
| Conread position: | 867-1142 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 16, 54 |
| Conread position: | 868-1040 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 50, 160 |
| Conread position: | 868-1072 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 151, 41 |
| Conread position: | 868-1081 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 42 |
| Conread position: | 869-1054 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 869-1084 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 110, 187 |
| Conread position: | 870-1004 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 8 |
| Conread position: | 870-1021 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 48, 65 |
| Conread position: | 870-1071 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 111, 35 |
| Conread position: | 870-1078 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 168, 46 |
| Conread position: | 870-1087 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 162 |
| Conread position: | 870-1088 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 16 |
| Conread position: | 870-1099 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 49, 38 |
| Conread position: | 871-1069 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 135 |
| Conread position: | 871-1073 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 871-1081 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 193, 23 |
| Conread position: | 871-1081 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 40, 112 |
| Conread position: | 871-1088 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 48, 111 |
| Conread position: | 872-1076 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 112, 156 |
| Conread position: | 872-1088 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 37, 9 |
| Conread position: | 872-1090 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 109, 171 |
| Conread position: | 874-1054 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 35 |
| Conread position: | 874-1073 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 109, 32 |
| Conread position: | 875-1047 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 51 |
| Conread position: | 875-1074 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 875-1082 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 107, 48 |
| Conread position: | 877-1069 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 880-1067 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 44 |
| Conread position: | 880-1073 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 142, 104 |
| Conread position: | 880-1081 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 192, 72 |
| Conread position: | 882-1074 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 33, 107 |
| Conread position: | 882-1076 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 40, 147 |
| Conread position: | 882-1082 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 882-1087 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 27, 49 |
| Conread position: | 882-1092 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 99, 27 |
| Conread position: | 884-1047 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 147 |
| Conread position: | 888-1076 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 93, 21 |
| Conread position: | 888-1087 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 889-1073 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 92, 20 |
| Conread position: | 890-1088 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 20 |
| Conread position: | 891-1070 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 90, 136 |
| Conread position: | 892-1076 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 916-1076 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 121 |
| Conread position: | 919-1082 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 9 |
| Conread position: | 919-1088 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 62, 159 |
| Conread position: | 919-1088 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 65, 159 |
| Conread position: | 919-1107 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 100, 5 |
| Conread position: | 921-1074 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 123 |
| Conread position: | 921-1081 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 928-1075 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 122 |
| Conread position: | 954-1081 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 124, 33 |
Show alignments to all cow chromosomes.