Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01A040044.5 |
| Conread position: | 856-1074 |
| Cow position: | chr3:35852592-35852368 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 12, 68 |
| Conread position: | 856-1075 |
| Cow position: | chr3:23408466-23408255 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 856-1081 |
| Cow position: | chr3:48362958-48363178 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 10, 64 |
| Conread position: | 858-1061 |
| Cow position: | chr3:51349701-51349912 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 858-1081 |
| Cow position: | chr3:7337894-7337676 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 120, 29 |
| Conread position: | 864-1076 |
| Cow position: | chr3:19626616-19626404 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 51, 157 |
| Conread position: | 865-1000 |
| Cow position: | chr3:5821587-5821455 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 11 |
| Conread position: | 866-1081 |
| Cow position: | chr3:38864011-38864235 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 51, 198 |
| Conread position: | 867-1007 |
| Cow position: | chr3:75907277-75907413 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 867-1013 |
| Cow position: | chr3:44625267-44625122 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 114, 41 |
| Conread position: | 867-1040 |
| Cow position: | chr3:59799144-59799316 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 114, 42 |
| Conread position: | 867-1047 |
| Cow position: | chr3:17936944-17936764 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 114, 32 |
| Conread position: | 867-1047 |
| Cow position: | chr3:58969003-58968828 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 114, 29 |
| Conread position: | 867-1054 |
| Cow position: | chr3:10347252-10347437 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 151, 42 |
| Conread position: | 867-1054 |
| Cow position: | chr3:79094151-79093961 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 41, 78 |
| Conread position: | 867-1060 |
| Cow position: | chr3:66292280-66292088 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 114, 30 |
| Conread position: | 867-1061 |
| Cow position: | chr3:116089-116279 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 114, 41 |
| Conread position: | 867-1061 |
| Cow position: | chr3:26219155-26218961 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 114, 46 |
| Conread position: | 867-1061 |
| Cow position: | chr3:82019946-82019750 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 867-1063 |
| Cow position: | chr3:83815893-83815697 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 57 |
| Conread position: | 867-1068 |
| Cow position: | chr3:9641462-9641664 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 63, 49 |
| Conread position: | 867-1071 |
| Cow position: | chr3:54946025-54946230 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 114, 160 |
| Conread position: | 867-1071 |
| Cow position: | chr3:74601008-74601213 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 111, 160 |
| Conread position: | 867-1072 |
| Cow position: | chr3:55272150-55271947 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 117, 56 |
| Conread position: | 867-1072 |
| Cow position: | chr3:76922766-76922565 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 59, 71 |
| Conread position: | 867-1073 |
| Cow position: | chr3:15052055-15051848 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 115 |
| Conread position: | 867-1073 |
| Cow position: | chr3:81371542-81371750 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 867-1074 |
| Cow position: | chr3:20677938-20677740 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 867-1074 |
| Cow position: | chr3:22232755-22232557 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 867-1074 |
| Cow position: | chr3:45534400-45534193 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 68 |
| Conread position: | 867-1074 |
| Cow position: | chr3:53739289-53739085 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 117, 58 |
| Conread position: | 867-1074 |
| Cow position: | chr3:63177375-63177586 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 867-1075 |
| Cow position: | chr3:22165521-22165315 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 867-1075 |
| Cow position: | chr3:23105469-23105259 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 161 |
| Conread position: | 867-1075 |
| Cow position: | chr3:55177854-55177643 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 42, 163 |
| Conread position: | 867-1075 |
| Cow position: | chr3:68616430-68616227 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 96 |
| Conread position: | 867-1075 |
| Cow position: | chr3:80053642-80053443 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 867-1076 |
| Cow position: | chr3:9116924-9117132 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 152, 37 |
| Conread position: | 867-1076 |
| Cow position: | chr3:49327838-49328048 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 114, 160 |
| Conread position: | 867-1076 |
| Cow position: | chr3:53221911-53222115 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 105, 20 |
| Conread position: | 867-1080 |
| Cow position: | chr3:56059704-56059918 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 55, 191 |
| Conread position: | 867-1081 |
| Cow position: | chr3:8061024-8061233 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 867-1081 |
| Cow position: | chr3:12705649-12705438 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 113, 170 |
| Conread position: | 867-1081 |
| Cow position: | chr3:15951015-15950809 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 117, 46 |
| Conread position: | 867-1081 |
| Cow position: | chr3:17331623-17331829 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 92 |
| Conread position: | 867-1081 |
| Cow position: | chr3:27274426-27274636 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 114, 42 |
| Conread position: | 867-1081 |
| Cow position: | chr3:39969971-39969754 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 20, 43 |
| Conread position: | 867-1081 |
| Cow position: | chr3:53150225-53150442 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 101, 44 |
| Conread position: | 867-1081 |
| Cow position: | chr3:53790640-53790430 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 152, 49 |
| Conread position: | 867-1081 |
| Cow position: | chr3:70762226-70762014 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 44, 72 |
| Conread position: | 867-1081 |
| Cow position: | chr3:74079742-74079529 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 49, 57 |
| Conread position: | 867-1081 |
| Cow position: | chr3:74234087-74234294 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 120, 49 |
| Conread position: | 867-1081 |
| Cow position: | chr3:78093487-78093281 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 113, 42 |
| Conread position: | 867-1081 |
| Cow position: | chr3:80564860-80565073 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 44, 75 |
| Conread position: | 867-1082 |
| Cow position: | chr3:26681907-26681707 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 867-1083 |
| Cow position: | chr3:13353258-13353475 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 174, 114 |
| Conread position: | 867-1084 |
| Cow position: | chr3:68627790-68627575 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 114, 69 |
| Conread position: | 867-1084 |
| Cow position: | chr3:73443190-73442985 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 211, 31 |
| Conread position: | 867-1085 |
| Cow position: | chr3:70565841-70565625 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 68, 52 |
| Conread position: | 867-1085 |
| Cow position: | chr3:73708944-73709156 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 117, 40 |
| Conread position: | 867-1086 |
| Cow position: | chr3:58318057-58317835 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 65, 214 |
| Conread position: | 867-1087 |
| Cow position: | chr3:16752363-16752145 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 152, 37 |
| Conread position: | 867-1087 |
| Cow position: | chr3:45881800-45882008 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 117, 42 |
| Conread position: | 867-1088 |
| Cow position: | chr3:17447712-17447500 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 867-1088 |
| Cow position: | chr3:55189860-55189638 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 114, 212 |
| Conread position: | 867-1088 |
| Cow position: | chr3:62789283-62789060 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 42, 192 |
| Conread position: | 867-1088 |
| Cow position: | chr3:80072023-80072244 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 114, 160 |
| Conread position: | 867-1097 |
| Cow position: | chr3:57273962-57274186 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 136, 30 |
| Conread position: | 867-1107 |
| Cow position: | chr3:3316916-3316686 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 116, 41 |
| Conread position: | 867-1112 |
| Cow position: | chr3:70899791-70900030 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 114, 42 |
| Conread position: | 868-1040 |
| Cow position: | chr3:64135612-64135786 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 868-1054 |
| Cow position: | chr3:74533246-74533431 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 113, 38 |
| Conread position: | 868-1070 |
| Cow position: | chr3:70895944-70896146 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 116, 41 |
| Conread position: | 868-1074 |
| Cow position: | chr3:48072984-48072782 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 113, 38 |
| Conread position: | 868-1081 |
| Cow position: | chr3:73460861-73461074 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 48, 140 |
| Conread position: | 868-1085 |
| Cow position: | chr3:12712020-12711805 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 116, 159 |
| Conread position: | 868-1088 |
| Cow position: | chr3:17935041-17934822 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 869-1081 |
| Cow position: | chr3:1036925-1037131 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 112, 37 |
| Conread position: | 870-1035 |
| Cow position: | chr3:12670716-12670552 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 111, 137 |
| Conread position: | 870-1054 |
| Cow position: | chr3:45647577-45647762 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 870-1054 |
| Cow position: | chr3:68881212-68881040 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 148, 55 |
| Conread position: | 870-1060 |
| Cow position: | chr3:73237093-73237284 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 112, 157 |
| Conread position: | 870-1069 |
| Cow position: | chr3:3883919-3883720 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 44, 155 |
| Conread position: | 870-1074 |
| Cow position: | chr3:78077089-78077291 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 111, 42 |
| Conread position: | 870-1075 |
| Cow position: | chr3:23169166-23168965 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 48, 5 |
| Conread position: | 870-1075 |
| Cow position: | chr3:67704442-67704649 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 870-1076 |
| Cow position: | chr3:10958343-10958138 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 111, 189 |
| Conread position: | 870-1076 |
| Cow position: | chr3:68708104-68707909 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 148, 34 |
| Conread position: | 870-1076 |
| Cow position: | chr3:70609524-70609731 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 39, 113 |
| Conread position: | 870-1078 |
| Cow position: | chr3:60264818-60264610 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 53, 41 |
| Conread position: | 870-1081 |
| Cow position: | chr3:19585761-19585973 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 208, 0 |
| Conread position: | 870-1084 |
| Cow position: | chr3:74242893-74243103 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 75, 100 |
| Conread position: | 870-1086 |
| Cow position: | chr3:75080667-75080873 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 111, 39 |
| Conread position: | 870-1087 |
| Cow position: | chr3:2674928-2675141 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 111, 43 |
| Conread position: | 870-1087 |
| Cow position: | chr3:55983994-55984210 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 46, 134 |
| Conread position: | 870-1087 |
| Cow position: | chr3:68156634-68156837 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 110, 39 |
| Conread position: | 870-1087 |
| Cow position: | chr3:73820470-73820253 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 114, 17 |
| Conread position: | 870-1088 |
| Cow position: | chr3:6520075-6519854 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 14, 114 |
| Conread position: | 870-1088 |
| Cow position: | chr3:35621202-35621417 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 207, 118 |
| Conread position: | 870-1088 |
| Cow position: | chr3:84175926-84175707 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 50 |
| Conread position: | 870-1096 |
| Cow position: | chr3:7661752-7661974 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 61 |
| Conread position: | 870-1104 |
| Cow position: | chr3:26874492-26874722 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 45, 103 |
| Conread position: | 870-1174 |
| Cow position: | chr3:29887522-29887222 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 871-1070 |
| Cow position: | chr3:50768583-50768776 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 116, 37 |
| Conread position: | 871-1071 |
| Cow position: | chr3:55835924-55835723 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 25, 160 |
| Conread position: | 871-1073 |
| Cow position: | chr3:22221220-22221426 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 182 |
| Conread position: | 871-1076 |
| Cow position: | chr3:44932413-44932617 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 48, 141 |
| Conread position: | 871-1082 |
| Cow position: | chr3:31361318-31361532 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 105, 83 |
| Conread position: | 871-1088 |
| Cow position: | chr3:3738388-3738596 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 148, 33 |
| Conread position: | 872-1072 |
| Cow position: | chr3:32585054-32585248 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 110, 40 |
| Conread position: | 872-1082 |
| Cow position: | chr3:10668979-10668771 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 872-1086 |
| Cow position: | chr3:15172980-15173194 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 61, 10 |
| Conread position: | 872-1088 |
| Cow position: | chr3:13507366-13507581 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 179 |
| Conread position: | 873-1047 |
| Cow position: | chr3:55109714-55109538 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 155 |
| Conread position: | 873-1047 |
| Cow position: | chr3:75608399-75608573 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 43, 106 |
| Conread position: | 873-1060 |
| Cow position: | chr3:54506606-54506795 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 873-1069 |
| Cow position: | chr3:47753126-47753323 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 873-1080 |
| Cow position: | chr3:59610818-59610610 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 873-1084 |
| Cow position: | chr3:83474646-83474856 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 88, 14 |
| Conread position: | 873-1091 |
| Cow position: | chr3:59621744-59621530 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 112, 46 |
| Conread position: | 873-1098 |
| Cow position: | chr3:54373956-54373735 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 112, 39 |
| Conread position: | 874-979 |
| Cow position: | chr3:5851027-5850923 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 874-1060 |
| Cow position: | chr3:6182310-6182139 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 145, 35 |
| Conread position: | 874-1061 |
| Cow position: | chr3:3471941-3472129 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 54, 71 |
| Conread position: | 874-1072 |
| Cow position: | chr3:18607565-18607770 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 874-1076 |
| Cow position: | chr3:52608083-52608284 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 109, 183 |
| Conread position: | 874-1076 |
| Cow position: | chr3:59604746-59604947 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 874-1088 |
| Cow position: | chr3:15506347-15506566 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 10, 123 |
| Conread position: | 875-1072 |
| Cow position: | chr3:56476583-56476780 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 185 |
| Conread position: | 875-1081 |
| Cow position: | chr3:75479905-75480107 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 144, 106 |
| Conread position: | 876-1081 |
| Cow position: | chr3:4548920-4549133 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 33, 193 |
| Conread position: | 876-1086 |
| Cow position: | chr3:49363020-49363223 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 19 |
| Conread position: | 878-1075 |
| Cow position: | chr3:54290608-54290409 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 100, 149 |
| Conread position: | 878-1087 |
| Cow position: | chr3:32409118-32409329 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 106, 38 |
| Conread position: | 879-1087 |
| Cow position: | chr3:69785718-69785509 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 881-1068 |
| Cow position: | chr3:2067803-2067990 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 882-1017 |
| Cow position: | chr3:19162523-19162656 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 33, 73 |
| Conread position: | 882-1081 |
| Cow position: | chr3:31350194-31349999 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 99, 34 |
| Conread position: | 882-1082 |
| Cow position: | chr3:78092602-78092401 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 99, 149 |
| Conread position: | 882-1085 |
| Cow position: | chr3:11063288-11063476 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 882-1087 |
| Cow position: | chr3:53508529-53508723 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 101, 32 |
| Conread position: | 882-1104 |
| Cow position: | chr3:44330527-44330302 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 103, 41 |
| Conread position: | 883-1040 |
| Cow position: | chr3:70614574-70614419 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 883-1042 |
| Cow position: | chr3:478888-478730 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 41, 99 |
| Conread position: | 884-1061 |
| Cow position: | chr3:19682605-19682786 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 884-1085 |
| Cow position: | chr3:79196671-79196872 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 97, 11 |
| Conread position: | 886-1074 |
| Cow position: | chr3:61224832-61224640 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 30, 142 |
| Conread position: | 887-1081 |
| Cow position: | chr3:64196740-64196934 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 94, 191 |
| Conread position: | 887-1087 |
| Cow position: | chr3:74900722-74900527 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 20 |
| Conread position: | 888-1086 |
| Cow position: | chr3:59299493-59299689 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 93, 28 |
| Conread position: | 889-1080 |
| Cow position: | chr3:3478338-3478149 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 154, 92 |
| Conread position: | 889-1146 |
| Cow position: | chr3:4480858-4481117 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 37, 70 |
| Conread position: | 902-1073 |
| Cow position: | chr3:20333937-20334108 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 82, 14 |
| Conread position: | 907-1088 |
| Cow position: | chr3:82629250-82629428 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 74, 143 |
| Conread position: | 908-1047 |
| Cow position: | chr3:71703415-71703550 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 912-1072 |
| Cow position: | chr3:68004763-68004604 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 70, 145 |
| Conread position: | 916-1110 |
| Cow position: | chr3:71423608-71423414 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 103, 74 |
| Conread position: | 917-1076 |
| Cow position: | chr3:49344637-49344798 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 922-1072 |
| Cow position: | chr3:44961055-44960907 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 62, 32 |
| Conread position: | 922-1072 |
| Cow position: | chr3:53084039-53083882 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 925-1078 |
| Cow position: | chr3:16505523-16505379 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 925-1081 |
| Cow position: | chr3:75107726-75107881 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 132 |
| Conread position: | 925-1082 |
| Cow position: | chr3:23132217-23132058 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 926-1098 |
| Cow position: | chr3:26603602-26603425 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 157 |
| Conread position: | 927-1068 |
| Cow position: | chr3:41652330-41652473 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 934-1076 |
| Cow position: | chr3:82123587-82123443 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
Show alignments to all cow chromosomes.