Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01A040044.5 |
| Conread position: | 840-1061 |
| Cow position: | chr4:3850437-3850657 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 75 |
| Conread position: | 853-1074 |
| Cow position: | chr4:19408101-19407879 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 857-974 |
| Cow position: | chr4:47047796-47047913 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 68 |
| Conread position: | 857-1070 |
| Cow position: | chr4:24810538-24810336 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 124, 49 |
| Conread position: | 858-1074 |
| Cow position: | chr4:19744789-19744994 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 858-1076 |
| Cow position: | chr4:48485896-48486115 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 57, 37 |
| Conread position: | 861-1075 |
| Cow position: | chr4:19493459-19493674 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 64 |
| Conread position: | 864-1088 |
| Cow position: | chr4:49826163-49826384 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 117, 34 |
| Conread position: | 864-1088 |
| Cow position: | chr4:65650220-65649998 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 8, 53 |
| Conread position: | 866-1075 |
| Cow position: | chr4:9815436-9815227 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 118, 53 |
| Conread position: | 867-976 |
| Cow position: | chr4:24458192-24458083 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 867-1000 |
| Cow position: | chr4:20299186-20299320 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 867-1020 |
| Cow position: | chr4:11332005-11332162 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 105, 51 |
| Conread position: | 867-1025 |
| Cow position: | chr4:24744496-24744335 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 64 |
| Conread position: | 867-1041 |
| Cow position: | chr4:16799275-16799100 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 867-1043 |
| Cow position: | chr4:20139604-20139429 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 57 |
| Conread position: | 867-1054 |
| Cow position: | chr4:34022674-34022486 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 867-1054 |
| Cow position: | chr4:42921938-42921761 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 867-1055 |
| Cow position: | chr4:17111964-17111774 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 867-1061 |
| Cow position: | chr4:20327798-20327603 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 51, 58 |
| Conread position: | 867-1065 |
| Cow position: | chr4:24002054-24001860 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 114, 157 |
| Conread position: | 867-1066 |
| Cow position: | chr4:10379021-10379221 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 114, 190 |
| Conread position: | 867-1070 |
| Cow position: | chr4:38157178-38156973 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 47, 161 |
| Conread position: | 867-1072 |
| Cow position: | chr4:53208207-53208408 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 113, 37 |
| Conread position: | 867-1073 |
| Cow position: | chr4:19435172-19435371 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 117, 39 |
| Conread position: | 867-1073 |
| Cow position: | chr4:34503205-34503412 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 98, 49 |
| Conread position: | 867-1073 |
| Cow position: | chr4:68387704-68387908 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 867-1074 |
| Cow position: | chr4:17186438-17186232 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 156, 82 |
| Conread position: | 867-1074 |
| Cow position: | chr4:47730768-47730981 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 867-1074 |
| Cow position: | chr4:51727989-51728197 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 104, 49 |
| Conread position: | 867-1075 |
| Cow position: | chr4:7571322-7571530 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 172 |
| Conread position: | 867-1075 |
| Cow position: | chr4:19097200-19097407 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 867-1076 |
| Cow position: | chr4:1419135-1419347 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 115, 96 |
| Conread position: | 867-1076 |
| Cow position: | chr4:4085208-4084988 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 43 |
| Conread position: | 867-1076 |
| Cow position: | chr4:19118919-19119138 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 867-1076 |
| Cow position: | chr4:31136664-31136877 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 867-1076 |
| Cow position: | chr4:34630806-34631022 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 867-1077 |
| Cow position: | chr4:3687836-3688049 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 114, 30 |
| Conread position: | 867-1077 |
| Cow position: | chr4:33970991-33970775 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 92, 214 |
| Conread position: | 867-1081 |
| Cow position: | chr4:19578310-19578512 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 117, 42 |
| Conread position: | 867-1081 |
| Cow position: | chr4:21391900-21391688 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 117, 94 |
| Conread position: | 867-1081 |
| Cow position: | chr4:27530030-27530243 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 114, 49 |
| Conread position: | 867-1081 |
| Cow position: | chr4:28772155-28771944 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 867-1081 |
| Cow position: | chr4:36290541-36290747 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 116, 42 |
| Conread position: | 867-1081 |
| Cow position: | chr4:37915425-37915213 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 55, 103 |
| Conread position: | 867-1081 |
| Cow position: | chr4:40414717-40414503 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 867-1081 |
| Cow position: | chr4:44903197-44903418 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 25, 20 |
| Conread position: | 867-1081 |
| Cow position: | chr4:54455430-54455223 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 211, 42 |
| Conread position: | 867-1082 |
| Cow position: | chr4:25537458-25537674 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 116, 158 |
| Conread position: | 867-1084 |
| Cow position: | chr4:17084428-17084209 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 44, 192 |
| Conread position: | 867-1085 |
| Cow position: | chr4:34641816-34641598 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 59, 171 |
| Conread position: | 867-1086 |
| Cow position: | chr4:23847135-23846922 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 43, 50 |
| Conread position: | 867-1086 |
| Cow position: | chr4:51784091-51784310 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 210, 191 |
| Conread position: | 867-1087 |
| Cow position: | chr4:10915930-10915706 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 52, 63 |
| Conread position: | 867-1087 |
| Cow position: | chr4:37313082-37313296 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 867-1087 |
| Cow position: | chr4:44773133-44772914 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 61 |
| Conread position: | 867-1087 |
| Cow position: | chr4:51898920-51899140 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 111, 82 |
| Conread position: | 867-1088 |
| Cow position: | chr4:8947306-8947526 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 20 |
| Conread position: | 867-1088 |
| Cow position: | chr4:12903731-12903952 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 58 |
| Conread position: | 867-1088 |
| Cow position: | chr4:36893270-36893492 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 867-1088 |
| Cow position: | chr4:44782286-44782506 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 114, 103 |
| Conread position: | 867-1088 |
| Cow position: | chr4:45775427-45775208 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 11, 43 |
| Conread position: | 867-1088 |
| Cow position: | chr4:51769024-51769238 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 185, 40 |
| Conread position: | 867-1088 |
| Cow position: | chr4:65919526-65919740 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 867-1089 |
| Cow position: | chr4:38944345-38944125 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 57 |
| Conread position: | 867-1093 |
| Cow position: | chr4:11871995-11871785 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 117, 14 |
| Conread position: | 867-1095 |
| Cow position: | chr4:19700019-19700239 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 196, 43 |
| Conread position: | 867-1101 |
| Cow position: | chr4:53100711-53100949 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 51, 215 |
| Conread position: | 867-1104 |
| Cow position: | chr4:19323886-19324122 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 114, 15 |
| Conread position: | 867-1104 |
| Cow position: | chr4:63096161-63095928 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 48, 31 |
| Conread position: | 867-1110 |
| Cow position: | chr4:44449591-44449353 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 9 |
| Conread position: | 868-1074 |
| Cow position: | chr4:59277566-59277357 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 116, 55 |
| Conread position: | 868-1081 |
| Cow position: | chr4:13344450-13344661 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 110, 161 |
| Conread position: | 868-1081 |
| Cow position: | chr4:42423891-42423680 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 869-1072 |
| Cow position: | chr4:17774438-17774235 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 59 |
| Conread position: | 869-1074 |
| Cow position: | chr4:11194098-11194304 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 52, 105 |
| Conread position: | 869-1076 |
| Cow position: | chr4:54921172-54920971 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 869-1082 |
| Cow position: | chr4:58248316-58248527 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 47, 123 |
| Conread position: | 869-1084 |
| Cow position: | chr4:48396879-48396668 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 96, 31 |
| Conread position: | 870-1036 |
| Cow position: | chr4:21232958-21232793 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 870-1054 |
| Cow position: | chr4:48409354-48409170 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 66, 46 |
| Conread position: | 870-1054 |
| Cow position: | chr4:61897619-61897436 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 111, 55 |
| Conread position: | 870-1066 |
| Cow position: | chr4:66136689-66136497 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 870-1067 |
| Cow position: | chr4:12049161-12049360 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 108, 116 |
| Conread position: | 870-1068 |
| Cow position: | chr4:38952468-38952666 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 45, 58 |
| Conread position: | 870-1071 |
| Cow position: | chr4:34337357-34337157 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 113 |
| Conread position: | 870-1074 |
| Cow position: | chr4:56239939-56239742 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 111, 37 |
| Conread position: | 870-1075 |
| Cow position: | chr4:4319231-4319031 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 108, 28 |
| Conread position: | 870-1081 |
| Cow position: | chr4:38935272-38935486 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 50, 162 |
| Conread position: | 870-1087 |
| Cow position: | chr4:19102969-19102751 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 870-1087 |
| Cow position: | chr4:19501173-19500962 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 111, 43 |
| Conread position: | 870-1087 |
| Cow position: | chr4:64657380-64657168 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 51, 111 |
| Conread position: | 870-1087 |
| Cow position: | chr4:66547853-66547638 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 112, 45 |
| Conread position: | 870-1088 |
| Cow position: | chr4:19098381-19098604 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 44, 213 |
| Conread position: | 870-1104 |
| Cow position: | chr4:65950571-65950808 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 111, 44 |
| Conread position: | 871-1081 |
| Cow position: | chr4:35981910-35982123 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 36, 157 |
| Conread position: | 871-1083 |
| Cow position: | chr4:508991-508779 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 114, 43 |
| Conread position: | 871-1087 |
| Cow position: | chr4:48152454-48152246 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 871-1089 |
| Cow position: | chr4:33433347-33433123 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 190 |
| Conread position: | 871-1112 |
| Cow position: | chr4:58881046-58880803 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 49, 38 |
| Conread position: | 872-1060 |
| Cow position: | chr4:54927524-54927335 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 872-1071 |
| Cow position: | chr4:34509758-34509956 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 106, 9 |
| Conread position: | 872-1081 |
| Cow position: | chr4:23600095-23600294 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 112, 53 |
| Conread position: | 872-1081 |
| Cow position: | chr4:45644390-45644195 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 168, 25 |
| Conread position: | 872-1082 |
| Cow position: | chr4:20027188-20026979 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 42, 159 |
| Conread position: | 872-1098 |
| Cow position: | chr4:47348745-47348971 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 99, 112 |
| Conread position: | 872-1120 |
| Cow position: | chr4:54191006-54191256 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 33, 45 |
| Conread position: | 873-1054 |
| Cow position: | chr4:68889644-68889462 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 105, 154 |
| Conread position: | 873-1073 |
| Cow position: | chr4:37704185-37704381 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 105, 125 |
| Conread position: | 873-1086 |
| Cow position: | chr4:46566555-46566338 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 52, 36 |
| Conread position: | 874-1081 |
| Cow position: | chr4:3421540-3421749 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 107, 206 |
| Conread position: | 874-1119 |
| Cow position: | chr4:10851529-10851290 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 145, 13 |
| Conread position: | 875-1047 |
| Cow position: | chr4:13991034-13990867 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 875-1074 |
| Cow position: | chr4:59002213-59002021 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 875-1075 |
| Cow position: | chr4:37991518-37991709 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 73 |
| Conread position: | 875-1081 |
| Cow position: | chr4:21874093-21874303 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 48, 162 |
| Conread position: | 875-1092 |
| Cow position: | chr4:48961567-48961349 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 182 |
| Conread position: | 876-1027 |
| Cow position: | chr4:21064957-21065109 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 105, 65 |
| Conread position: | 876-1081 |
| Cow position: | chr4:62472002-62472204 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 107, 44 |
| Conread position: | 876-1085 |
| Cow position: | chr4:45705967-45706171 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 179, 43 |
| Conread position: | 876-1087 |
| Cow position: | chr4:60719021-60719233 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 877-1082 |
| Cow position: | chr4:46435245-46435448 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 101, 150 |
| Conread position: | 881-1032 |
| Cow position: | chr4:620207-620058 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 28 |
| Conread position: | 881-1047 |
| Cow position: | chr4:61478528-61478697 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 17, 148 |
| Conread position: | 881-1074 |
| Cow position: | chr4:48422802-48422995 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 102, 149 |
| Conread position: | 881-1075 |
| Cow position: | chr4:52832092-52831897 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 157 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 37, 92 |
| Conread position: | 881-1081 |
| Cow position: | chr4:8182713-8182509 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 882-1021 |
| Cow position: | chr4:67466650-67466788 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 96, 34 |
| Conread position: | 882-1088 |
| Cow position: | chr4:46550306-46550514 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 27, 42 |
| Conread position: | 884-1087 |
| Cow position: | chr4:21531716-21531515 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 173 |
| Conread position: | 887-1088 |
| Cow position: | chr4:49800626-49800822 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 887-1088 |
| Cow position: | chr4:54541708-54541504 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 889-1072 |
| Cow position: | chr4:28701289-28701475 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 889-1075 |
| Cow position: | chr4:17851318-17851133 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 96, 18 |
| Conread position: | 891-1086 |
| Cow position: | chr4:59377846-59378039 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 92, 23 |
| Conread position: | 895-1096 |
| Cow position: | chr4:65131514-65131310 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 896-1075 |
| Cow position: | chr4:22010115-22009937 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 123, 85 |
| Conread position: | 899-1107 |
| Cow position: | chr4:12441840-12442047 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 19 |
| Conread position: | 899-1107 |
| Cow position: | chr4:13241570-13241777 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 84, 19 |
| Conread position: | 902-1081 |
| Cow position: | chr4:38210030-38209850 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 13, 156 |
| Conread position: | 907-1073 |
| Cow position: | chr4:44854339-44854175 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 77, 40 |
| Conread position: | 908-1073 |
| Cow position: | chr4:10558488-10558657 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 910-1076 |
| Cow position: | chr4:18951926-18952096 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 910-1096 |
| Cow position: | chr4:36744533-36744714 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 8, 75 |
| Conread position: | 916-1074 |
| Cow position: | chr4:11969416-11969572 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 918-1053 |
| Cow position: | chr4:56336629-56336763 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 925-1075 |
| Cow position: | chr4:68590746-68590889 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 43, 53 |
| Conread position: | 925-1076 |
| Cow position: | chr4:60141548-60141403 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 925-1084 |
| Cow position: | chr4:10472158-10472321 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 56, 108 |
| Conread position: | 928-1081 |
| Cow position: | chr4:19333358-19333511 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 102 |
| Conread position: | 928-1084 |
| Cow position: | chr4:58305933-58305777 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 150, 121 |
| Conread position: | 928-1088 |
| Cow position: | chr4:60443068-60442913 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 933-1075 |
| Cow position: | chr4:33838823-33838681 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 85, 48 |
| Conread position: | 933-1075 |
| Cow position: | chr4:43916265-43916408 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 934-1074 |
| Cow position: | chr4:18099084-18098944 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 48, 93 |
Show alignments to all cow chromosomes.