Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01A040044.5 |
| Conread position: | 850-1075 |
| Cow position: | chr5:16893844-16893621 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 74 |
| Conread position: | 854-1085 |
| Cow position: | chr5:49501890-49501660 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 130, 8 |
| Conread position: | 855-1087 |
| Cow position: | chr5:44028370-44028145 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 857-1072 |
| Cow position: | chr5:11229732-11229525 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 11 |
| Conread position: | 857-1082 |
| Cow position: | chr5:19752242-19752461 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 11 |
| Conread position: | 857-1083 |
| Cow position: | chr5:66257574-66257797 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 858-1068 |
| Cow position: | chr5:15363819-15364028 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 123, 28 |
| Conread position: | 864-1084 |
| Cow position: | chr5:35982796-35982575 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 66, 14 |
| Conread position: | 865-1082 |
| Cow position: | chr5:44796787-44796576 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 866-1075 |
| Cow position: | chr5:25231065-25230866 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 45, 70 |
| Conread position: | 867-972 |
| Cow position: | chr5:60126317-60126422 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 867-1004 |
| Cow position: | chr5:991412-991546 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 114, 38 |
| Conread position: | 867-1018 |
| Cow position: | chr5:63865741-63865891 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 118 |
| Conread position: | 867-1034 |
| Cow position: | chr5:45472226-45472399 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 867-1045 |
| Cow position: | chr5:45804005-45804182 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 45 |
| Conread position: | 867-1047 |
| Cow position: | chr5:15598287-15598113 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 867-1051 |
| Cow position: | chr5:64139512-64139689 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 116, 30 |
| Conread position: | 867-1054 |
| Cow position: | chr5:30302839-30303023 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 48, 68 |
| Conread position: | 867-1058 |
| Cow position: | chr5:57935163-57934972 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 114, 49 |
| Conread position: | 867-1061 |
| Cow position: | chr5:35826549-35826740 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 31 |
| Conread position: | 867-1061 |
| Cow position: | chr5:72564708-72564903 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 53, 42 |
| Conread position: | 867-1062 |
| Cow position: | chr5:23529334-23529143 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 867-1068 |
| Cow position: | chr5:22643279-22643086 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 867-1069 |
| Cow position: | chr5:74015886-74016087 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 867-1071 |
| Cow position: | chr5:41165032-41165237 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 867-1072 |
| Cow position: | chr5:56524115-56524322 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 59, 164 |
| Conread position: | 867-1073 |
| Cow position: | chr5:60183747-60183955 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 107, 194 |
| Conread position: | 867-1073 |
| Cow position: | chr5:66366453-66366664 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 44, 127 |
| Conread position: | 867-1074 |
| Cow position: | chr5:26467569-26467780 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 867-1074 |
| Cow position: | chr5:44446922-44446715 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 74, 193 |
| Conread position: | 867-1074 |
| Cow position: | chr5:49474603-49474394 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 62 |
| Conread position: | 867-1074 |
| Cow position: | chr5:54375561-54375352 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 77, 56 |
| Conread position: | 867-1074 |
| Cow position: | chr5:62172360-62172564 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 114, 48 |
| Conread position: | 867-1075 |
| Cow position: | chr5:34561958-34562171 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 867-1075 |
| Cow position: | chr5:41545948-41545740 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 867-1075 |
| Cow position: | chr5:42050497-42050704 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 55, 17 |
| Conread position: | 867-1075 |
| Cow position: | chr5:64321698-64321903 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 49 |
| Conread position: | 867-1075 |
| Cow position: | chr5:67212302-67212513 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 179 |
| Conread position: | 867-1075 |
| Cow position: | chr5:69636181-69636377 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 113, 42 |
| Conread position: | 867-1076 |
| Cow position: | chr5:9894183-9893968 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 867-1076 |
| Cow position: | chr5:14314471-14314680 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 190 |
| Conread position: | 867-1076 |
| Cow position: | chr5:50600002-50600200 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 114, 20 |
| Conread position: | 867-1076 |
| Cow position: | chr5:61725914-61726117 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 99, 13 |
| Conread position: | 867-1076 |
| Cow position: | chr5:74643725-74643524 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 867-1081 |
| Cow position: | chr5:1087251-1087042 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 114, 55 |
| Conread position: | 867-1081 |
| Cow position: | chr5:3549841-3549643 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 104 |
| Conread position: | 867-1081 |
| Cow position: | chr5:17555086-17554875 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 111, 20 |
| Conread position: | 867-1081 |
| Cow position: | chr5:21617403-21617615 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 114, 35 |
| Conread position: | 867-1081 |
| Cow position: | chr5:21828812-21829027 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 114, 146 |
| Conread position: | 867-1081 |
| Cow position: | chr5:30276643-30276846 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 117, 44 |
| Conread position: | 867-1081 |
| Cow position: | chr5:45397518-45397727 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 210, 49 |
| Conread position: | 867-1081 |
| Cow position: | chr5:47601765-47601970 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 114, 42 |
| Conread position: | 867-1081 |
| Cow position: | chr5:59627028-59626812 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 48, 171 |
| Conread position: | 867-1081 |
| Cow position: | chr5:60016113-60016324 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 210, 49 |
| Conread position: | 867-1082 |
| Cow position: | chr5:35684882-35685094 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 152, 116 |
| Conread position: | 867-1082 |
| Cow position: | chr5:64027062-64026858 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 117, 42 |
| Conread position: | 867-1082 |
| Cow position: | chr5:72895633-72895845 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 111, 14 |
| Conread position: | 867-1084 |
| Cow position: | chr5:23168883-23168663 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 867-1084 |
| Cow position: | chr5:50533441-50533227 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 115 |
| Conread position: | 867-1084 |
| Cow position: | chr5:55966933-55966722 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 114, 38 |
| Conread position: | 867-1084 |
| Cow position: | chr5:63987505-63987284 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 13, 130 |
| Conread position: | 867-1085 |
| Cow position: | chr5:16206209-16205993 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 99, 120 |
| Conread position: | 867-1085 |
| Cow position: | chr5:30253687-30253901 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 117, 52 |
| Conread position: | 867-1085 |
| Cow position: | chr5:43402846-43403069 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 48, 166 |
| Conread position: | 867-1086 |
| Cow position: | chr5:30949970-30949750 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 114, 17 |
| Conread position: | 867-1086 |
| Cow position: | chr5:50821728-50821946 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 116, 64 |
| Conread position: | 867-1086 |
| Cow position: | chr5:53835659-53835880 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 68, 41 |
| Conread position: | 867-1087 |
| Cow position: | chr5:24996277-24996059 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 114, 58 |
| Conread position: | 867-1087 |
| Cow position: | chr5:46512817-46512606 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 112, 38 |
| Conread position: | 867-1088 |
| Cow position: | chr5:40241988-40242209 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 142 |
| Conread position: | 867-1088 |
| Cow position: | chr5:43992268-43992491 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 867-1088 |
| Cow position: | chr5:45420188-45419974 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 118, 40 |
| Conread position: | 867-1088 |
| Cow position: | chr5:46509921-46509699 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 114, 212 |
| Conread position: | 867-1089 |
| Cow position: | chr5:63234880-63234666 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 867-1093 |
| Cow position: | chr5:70951930-70951720 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 152, 42 |
| Conread position: | 867-1098 |
| Cow position: | chr5:7697951-7698178 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 114, 48 |
| Conread position: | 867-1102 |
| Cow position: | chr5:62378737-62378960 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 867-1103 |
| Cow position: | chr5:44726380-44726155 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 113, 42 |
| Conread position: | 867-1103 |
| Cow position: | chr5:54060223-54060458 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 47, 30 |
| Conread position: | 868-1071 |
| Cow position: | chr5:56014676-56014881 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 868-1072 |
| Cow position: | chr5:67243866-67244068 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 868-1111 |
| Cow position: | chr5:30845060-30845295 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 869-1061 |
| Cow position: | chr5:14629865-14629666 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 870-1004 |
| Cow position: | chr5:34638833-34638966 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 110, 57 |
| Conread position: | 870-1027 |
| Cow position: | chr5:32696874-32696717 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 54 |
| Conread position: | 870-1054 |
| Cow position: | chr5:29903569-29903391 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 111, 38 |
| Conread position: | 870-1073 |
| Cow position: | chr5:12434482-12434692 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 197 |
| Conread position: | 870-1074 |
| Cow position: | chr5:40109440-40109644 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 111, 128 |
| Conread position: | 870-1075 |
| Cow position: | chr5:17087073-17086867 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 870-1075 |
| Cow position: | chr5:36039057-36038847 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 870-1076 |
| Cow position: | chr5:6045240-6045448 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 56, 190 |
| Conread position: | 870-1076 |
| Cow position: | chr5:56877434-56877634 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 127, 37 |
| Conread position: | 870-1076 |
| Cow position: | chr5:68718818-68719022 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 186, 55 |
| Conread position: | 870-1081 |
| Cow position: | chr5:56070805-56071018 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 187 |
| Conread position: | 870-1082 |
| Cow position: | chr5:65752806-65753018 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 51, 46 |
| Conread position: | 870-1082 |
| Cow position: | chr5:65941301-65941092 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 870-1085 |
| Cow position: | chr5:7044758-7044546 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 56, 45 |
| Conread position: | 870-1086 |
| Cow position: | chr5:19523849-19524061 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 110, 39 |
| Conread position: | 870-1087 |
| Cow position: | chr5:30629209-30628993 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 111, 14 |
| Conread position: | 870-1107 |
| Cow position: | chr5:25495400-25495177 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 111, 47 |
| Conread position: | 871-1075 |
| Cow position: | chr5:57074383-57074179 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 55, 12 |
| Conread position: | 871-1081 |
| Cow position: | chr5:55955857-55956070 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 36, 55 |
| Conread position: | 871-1088 |
| Cow position: | chr5:24136663-24136883 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 50, 59 |
| Conread position: | 871-1103 |
| Cow position: | chr5:26150471-26150241 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 182, 44 |
| Conread position: | 872-1076 |
| Cow position: | chr5:33560782-33560582 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 113, 50 |
| Conread position: | 872-1076 |
| Cow position: | chr5:67118369-67118574 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 109, 158 |
| Conread position: | 872-1082 |
| Cow position: | chr5:66551948-66551736 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 872-1135 |
| Cow position: | chr5:43408408-43408141 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 112, 75 |
| Conread position: | 873-1075 |
| Cow position: | chr5:43929786-43929583 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 94 |
| Conread position: | 874-1072 |
| Cow position: | chr5:57101829-57101635 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 35, 53 |
| Conread position: | 874-1081 |
| Cow position: | chr5:69337774-69337978 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 38 |
| Conread position: | 875-1026 |
| Cow position: | chr5:63192788-63192636 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 109, 114 |
| Conread position: | 875-1061 |
| Cow position: | chr5:8821061-8820874 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 875-1069 |
| Cow position: | chr5:22242822-22242620 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 34 |
| Conread position: | 875-1071 |
| Cow position: | chr5:20422234-20422044 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 875-1075 |
| Cow position: | chr5:29912371-29912576 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 90, 40 |
| Conread position: | 875-1081 |
| Cow position: | chr5:38833075-38833278 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 106, 92 |
| Conread position: | 875-1082 |
| Cow position: | chr5:56339066-56338862 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 106, 47 |
| Conread position: | 875-1086 |
| Cow position: | chr5:64592142-64591930 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 106, 48 |
| Conread position: | 875-1087 |
| Cow position: | chr5:49440920-49440707 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 42, 179 |
| Conread position: | 875-1088 |
| Cow position: | chr5:45845740-45845523 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 42, 167 |
| Conread position: | 876-1061 |
| Cow position: | chr5:56517057-56517243 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 877-1086 |
| Cow position: | chr5:72006537-72006328 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 38, 154 |
| Conread position: | 878-1081 |
| Cow position: | chr5:69099675-69099879 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 103, 178 |
| Conread position: | 881-1075 |
| Cow position: | chr5:17602241-17602052 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 102, 42 |
| Conread position: | 881-1084 |
| Cow position: | chr5:49342089-49341888 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 881-1113 |
| Cow position: | chr5:31052345-31052570 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 97, 40 |
| Conread position: | 882-1047 |
| Cow position: | chr5:61102675-61102841 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 882-1076 |
| Cow position: | chr5:69461291-69461491 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 30, 151 |
| Conread position: | 882-1087 |
| Cow position: | chr5:20288303-20288098 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 99, 41 |
| Conread position: | 884-1088 |
| Cow position: | chr5:4166607-4166807 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 172, 21 |
| Conread position: | 886-1074 |
| Cow position: | chr5:28302785-28302593 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 178 |
| Conread position: | 887-1041 |
| Cow position: | chr5:20407714-20407559 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 887-1076 |
| Cow position: | chr5:57686775-57686585 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 174 |
| Conread position: | 887-1088 |
| Cow position: | chr5:30232871-30233071 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 888-1081 |
| Cow position: | chr5:26549175-26548983 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 93, 179 |
| Conread position: | 888-1082 |
| Cow position: | chr5:8736323-8736118 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 78, 120 |
| Conread position: | 889-1142 |
| Cow position: | chr5:22795181-22795437 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 26, 94 |
| Conread position: | 890-1076 |
| Cow position: | chr5:12322838-12322653 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 94 |
| Conread position: | 890-1088 |
| Cow position: | chr5:35969504-35969697 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 94, 17 |
| Conread position: | 895-1088 |
| Cow position: | chr5:14920958-14920762 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 49 |
| Conread position: | 896-1092 |
| Cow position: | chr5:57230365-57230170 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 89, 163 |
| Conread position: | 906-1081 |
| Cow position: | chr5:64176143-64175970 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 75, 153 |
| Conread position: | 909-1073 |
| Cow position: | chr5:17104840-17104999 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 909-1075 |
| Cow position: | chr5:9170593-9170429 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 72, 16 |
| Conread position: | 911-1073 |
| Cow position: | chr5:46541067-46540905 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 911-1137 |
| Cow position: | chr5:34915064-34914839 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 913-1075 |
| Cow position: | chr5:60523723-60523886 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 72 |
| Conread position: | 917-1072 |
| Cow position: | chr5:50824586-50824743 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 919-1076 |
| Cow position: | chr5:9233994-9233836 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 6, 140 |
| Conread position: | 925-1088 |
| Cow position: | chr5:4710149-4709985 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 929-1066 |
| Cow position: | chr5:12169762-12169623 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 29 |
| Conread position: | 934-1081 |
| Cow position: | chr5:38168905-38169053 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 124 |
| Conread position: | 935-1074 |
| Cow position: | chr5:55942367-55942227 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 935-1084 |
| Cow position: | chr5:46704287-46704137 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 124 |
| Conread position: | 943-1138 |
| Cow position: | chr5:55849905-55850097 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 184, 40 |
Show alignments to all cow chromosomes.