Cow genome map

Conread name: Ss1.1-Tra1-TCH01A040044.5

Conread position: 858-1087
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 123, 58

Conread position: 859-1087
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 66

Conread position: 861-1076
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 36

Conread position: 863-1072
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 181

Conread position: 865-1060
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 866-1108
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 118, 34

Conread position: 867-986
Cow position:
Alignm length: 120
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 867-1000
Cow position:
Alignm length: 136
Alignm identity: 111
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 867-1001
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 101, 56

Conread position: 867-1021
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 98, 40

Conread position: 867-1032
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 45

Conread position: 867-1034
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 53, 115

Conread position: 867-1047
Cow position:
Alignm length: 187
Alignm identity: 130
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 867-1048
Cow position:
Alignm length: 183
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 115

Conread position: 867-1049
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 867-1054
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 96, 39

Conread position: 867-1054
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 867-1061
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 123, 20

Conread position: 867-1063
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 20

Conread position: 867-1063
Cow position:
Alignm length: 200
Alignm identity: 152
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 54, 0

Conread position: 867-1065
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 178, 0

Conread position: 867-1066
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 114, 45

Conread position: 867-1067
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 174

Conread position: 867-1068
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 42

Conread position: 867-1073
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 114, 39

Conread position: 867-1074
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 118, 63

Conread position: 867-1074
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 174

Conread position: 867-1075
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 40

Conread position: 867-1075
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 120

Conread position: 867-1075
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 114, 45

Conread position: 867-1075
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 63

Conread position: 867-1075
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 11, 29

Conread position: 867-1075
Cow position:
Alignm length: 209
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 867-1076
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 20, 59

Conread position: 867-1076
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 117, 0

Conread position: 867-1076
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 117, 42

Conread position: 867-1079
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 867-1081
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 114, 103

Conread position: 867-1081
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 177

Conread position: 867-1081
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 167

Conread position: 867-1081
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 152, 42

Conread position: 867-1081
Cow position:
Alignm length: 218
Alignm identity: 168
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 50, 190

Conread position: 867-1084
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 46, 218

Conread position: 867-1084
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 117

Conread position: 867-1086
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 68

Conread position: 867-1087
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 114, 56

Conread position: 867-1087
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 29

Conread position: 867-1087
Cow position:
Alignm length: 222
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 157

Conread position: 867-1088
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 109, 219

Conread position: 867-1088
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 867-1088
Cow position:
Alignm length: 226
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 49

Conread position: 867-1088
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 116

Conread position: 867-1092
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 111, 49

Conread position: 867-1132
Cow position:
Alignm length: 267
Alignm identity: 182
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 117, 42

Conread position: 868-1070
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 53, 41

Conread position: 868-1075
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 28

Conread position: 868-1075
Cow position:
Alignm length: 212
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 113, 41

Conread position: 868-1076
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 113, 41

Conread position: 868-1081
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 113, 48

Conread position: 868-1081
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 123, 9

Conread position: 868-1081
Cow position:
Alignm length: 216
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 113, 54

Conread position: 868-1151
Cow position:
Alignm length: 286
Alignm identity: 207
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 113, 34

Conread position: 869-1061
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 870-1021
Cow position:
Alignm length: 153
Alignm identity: 121
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 111, 54

Conread position: 870-1021
Cow position:
Alignm length: 153
Alignm identity: 127
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 111, 46

Conread position: 870-1063
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 106, 162

Conread position: 870-1067
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 113, 11

Conread position: 870-1074
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 43, 82

Conread position: 870-1074
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 53

Conread position: 870-1076
Cow position:
Alignm length: 209
Alignm identity: 141
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 193, 44

Conread position: 870-1076
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 46

Conread position: 870-1076
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 44, 142

Conread position: 870-1080
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 160

Conread position: 870-1081
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 66, 39

Conread position: 870-1081
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 55, 46

Conread position: 870-1082
Cow position:
Alignm length: 214
Alignm identity: 165
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 17

Conread position: 870-1083
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 45, 39

Conread position: 870-1084
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 42, 11

Conread position: 870-1087
Cow position:
Alignm length: 221
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 191

Conread position: 870-1087
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 112, 39

Conread position: 870-1088
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 114, 11

Conread position: 870-1088
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 870-1109
Cow position:
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 66, 55

Conread position: 870-1110
Cow position:
Alignm length: 245
Alignm identity: 151
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 48, 0

Conread position: 871-1000
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 110, 44

Conread position: 871-1004
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 97

Conread position: 871-1047
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 110, 45

Conread position: 871-1047
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 107, 45

Conread position: 871-1081
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 113, 43

Conread position: 871-1082
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 46, 207

Conread position: 872-1074
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 32, 48

Conread position: 872-1075
Cow position:
Alignm length: 206
Alignm identity: 157
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 112, 37

Conread position: 872-1081
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 163

Conread position: 872-1081
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 872-1087
Cow position:
Alignm length: 220
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 172

Conread position: 873-1074
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 63, 178

Conread position: 873-1074
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 111, 34

Conread position: 873-1080
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 157

Conread position: 873-1088
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 873-1168
Cow position:
Alignm length: 306
Alignm identity: 202
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 108, 50

Conread position: 874-1037
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 874-1047
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 11, 113

Conread position: 874-1047
Cow position:
Alignm length: 175
Alignm identity: 140
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 50, 31

Conread position: 874-1047
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 107, 49

Conread position: 874-1075
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 107, 21

Conread position: 875-1030
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 108, 92

Conread position: 875-1060
Cow position:
Alignm length: 188
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 165, 42

Conread position: 875-1063
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 106, 32

Conread position: 875-1152
Cow position:
Alignm length: 283
Alignm identity: 189
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 204

Conread position: 877-1070
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 877-1087
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 107, 31

Conread position: 877-1103
Cow position:
Alignm length: 230
Alignm identity: 156
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 36, 49

Conread position: 881-1085
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 103, 178

Conread position: 881-1086
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 29

Conread position: 882-1061
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 99, 27

Conread position: 882-1073
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 42

Conread position: 882-1075
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 20

Conread position: 882-1075
Cow position:
Alignm length: 197
Alignm identity: 155
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 42

Conread position: 882-1081
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 96, 41

Conread position: 882-1087
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 150

Conread position: 882-1107
Cow position:
Alignm length: 230
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 98, 75

Conread position: 883-1074
Cow position:
Alignm length: 193
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 883-1081
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 38, 25

Conread position: 884-1076
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 22

Conread position: 887-1074
Cow position:
Alignm length: 190
Alignm identity: 143
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 94, 140

Conread position: 887-1087
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 34

Conread position: 888-1075
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 93, 21

Conread position: 890-1085
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 36, 19

Conread position: 908-1081
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 123

Conread position: 918-1084
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 66, 160

Conread position: 919-1074
Cow position:
Alignm length: 157
Alignm identity: 114
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 137, 65

Conread position: 919-1107
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 21

Conread position: 921-1075
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 107

Conread position: 939-1088
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 143, 138

Conread position: 940-1076
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Show alignments to all cow chromosomes.