Cow genome map

Conread name: Ss1.1-Tra1-TCH01A040044.5

Conread position: 835-1082
Cow position:
Alignm length: 251
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 220

Conread position: 856-1086
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 856-1088
Cow position:
Alignm length: 240
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 122, 22

Conread position: 858-1070
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 864-1061
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 117, 166

Conread position: 865-1073
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 18, 193

Conread position: 867-1035
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 163

Conread position: 867-1039
Cow position:
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 98, 40

Conread position: 867-1040
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 68

Conread position: 867-1040
Cow position:
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 114, 0

Conread position: 867-1047
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 164

Conread position: 867-1047
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 114, 45

Conread position: 867-1047
Cow position:
Alignm length: 181
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 867-1054
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 98, 56

Conread position: 867-1054
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 867-1062
Cow position:
Alignm length: 196
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 867-1064
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 9

Conread position: 867-1071
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 116

Conread position: 867-1074
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 137, 52

Conread position: 867-1074
Cow position:
Alignm length: 209
Alignm identity: 161
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 114, 0

Conread position: 867-1074
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 42, 176

Conread position: 867-1075
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 15, 45

Conread position: 867-1075
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 117, 26

Conread position: 867-1075
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 192, 20

Conread position: 867-1075
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 114, 42

Conread position: 867-1075
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 166

Conread position: 867-1076
Cow position:
Alignm length: 210
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 867-1076
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 50, 22

Conread position: 867-1076
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 198, 56

Conread position: 867-1080
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 114, 28

Conread position: 867-1081
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 117, 49

Conread position: 867-1081
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 113, 40

Conread position: 867-1081
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 116, 41

Conread position: 867-1081
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 114, 49

Conread position: 867-1081
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 193

Conread position: 867-1081
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 111, 27

Conread position: 867-1081
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 114, 42

Conread position: 867-1081
Cow position:
Alignm length: 218
Alignm identity: 167
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 867-1081
Cow position:
Alignm length: 218
Alignm identity: 173
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 52, 31

Conread position: 867-1081
Cow position:
Alignm length: 226
Alignm identity: 176
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 867-1081
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 57

Conread position: 867-1081
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 44, 161

Conread position: 867-1082
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 117, 38

Conread position: 867-1082
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 114, 42

Conread position: 867-1085
Cow position:
Alignm length: 220
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 178, 211

Conread position: 867-1086
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 118

Conread position: 867-1086
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 152, 42

Conread position: 867-1086
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 118

Conread position: 867-1087
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 13

Conread position: 867-1087
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 117, 38

Conread position: 867-1087
Cow position:
Alignm length: 230
Alignm identity: 160
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 38, 190

Conread position: 867-1088
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 50

Conread position: 867-1088
Cow position:
Alignm length: 226
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 115

Conread position: 867-1097
Cow position:
Alignm length: 233
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 164

Conread position: 867-1100
Cow position:
Alignm length: 235
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 114, 37

Conread position: 867-1103
Cow position:
Alignm length: 240
Alignm identity: 176
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 48, 74

Conread position: 867-1107
Cow position:
Alignm length: 245
Alignm identity: 167
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 59, 193

Conread position: 867-1115
Cow position:
Alignm length: 254
Alignm identity: 169
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 163

Conread position: 868-1060
Cow position:
Alignm length: 194
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 151, 113

Conread position: 868-1073
Cow position:
Alignm length: 211
Alignm identity: 145
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 113, 6

Conread position: 868-1087
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 58

Conread position: 869-1075
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 870-1003
Cow position:
Alignm length: 135
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 870-1043
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 111, 159

Conread position: 870-1061
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 870-1063
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 161

Conread position: 870-1064
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 870-1074
Cow position:
Alignm length: 206
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 186, 94

Conread position: 870-1074
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 114, 36

Conread position: 870-1075
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 108, 53

Conread position: 870-1075
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 57, 160

Conread position: 870-1081
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 124, 11

Conread position: 871-1075
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 56

Conread position: 871-1081
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 50, 144

Conread position: 871-1081
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 113, 36

Conread position: 871-1081
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 108, 38

Conread position: 871-1086
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 110, 25

Conread position: 871-1087
Cow position:
Alignm length: 219
Alignm identity: 168
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 148, 155

Conread position: 872-965
Cow position:
Alignm length: 94
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 872-1054
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 84, 92

Conread position: 872-1061
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 103, 44

Conread position: 872-1063
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 109, 127

Conread position: 872-1071
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 49, 185

Conread position: 872-1086
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 112, 40

Conread position: 872-1090
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 113, 43

Conread position: 872-1093
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 109, 42

Conread position: 873-1047
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 873-1081
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 27

Conread position: 873-1102
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 50

Conread position: 874-1059
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 52

Conread position: 874-1073
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 10, 32

Conread position: 875-1002
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 37

Conread position: 875-1076
Cow position:
Alignm length: 202
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 131, 0

Conread position: 876-1087
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 104, 19

Conread position: 877-1074
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 104, 48

Conread position: 879-1084
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 44

Conread position: 881-1081
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 37, 0

Conread position: 881-1082
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 100, 31

Conread position: 881-1087
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 14

Conread position: 882-1073
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 41

Conread position: 884-1086
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 96

Conread position: 887-1071
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 96

Conread position: 887-1088
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 6

Conread position: 888-1096
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 36

Conread position: 889-1061
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 99

Conread position: 889-1075
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 889-1096
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 26, 93

Conread position: 895-1061
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 906-1076
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 16

Conread position: 912-1088
Cow position:
Alignm length: 178
Alignm identity: 125
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 72, 11

Conread position: 916-1101
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 14, 69

Conread position: 919-1087
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 80

Conread position: 927-1103
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 132

Conread position: 930-1074
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 931-1075
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 119

Conread position: 944-1102
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 113

Show alignments to all cow chromosomes.