Cow genome map

Conread name: Ss1.1-Tra1-TCH01A040044.5

Conread position: 846-1034
Cow position:
Alignm length: 189
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 858-1073
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 60, 23

Conread position: 858-1075
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 109, 29

Conread position: 862-1076
Cow position:
Alignm length: 218
Alignm identity: 148
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 25

Conread position: 863-1047
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 121, 10

Conread position: 863-1087
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 193, 60

Conread position: 867-979
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 110, 46

Conread position: 867-979
Cow position:
Alignm length: 113
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 867-1004
Cow position:
Alignm length: 139
Alignm identity: 114
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 117

Conread position: 867-1047
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 114, 58

Conread position: 867-1051
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 114, 57

Conread position: 867-1054
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 114, 42

Conread position: 867-1058
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 66

Conread position: 867-1061
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 152, 15

Conread position: 867-1063
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 114, 171

Conread position: 867-1066
Cow position:
Alignm length: 201
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 114, 28

Conread position: 867-1069
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 112, 178

Conread position: 867-1072
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 194

Conread position: 867-1073
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 114, 167

Conread position: 867-1073
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 867-1073
Cow position:
Alignm length: 208
Alignm identity: 163
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 117, 45

Conread position: 867-1074
Cow position:
Alignm length: 210
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 114, 80

Conread position: 867-1074
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 185

Conread position: 867-1075
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 115

Conread position: 867-1075
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 114, 90

Conread position: 867-1075
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 21

Conread position: 867-1075
Cow position:
Alignm length: 210
Alignm identity: 143
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 867-1075
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 117, 14

Conread position: 867-1075
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 114, 41

Conread position: 867-1075
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 57

Conread position: 867-1075
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 114, 0

Conread position: 867-1075
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 98, 47

Conread position: 867-1076
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 114, 41

Conread position: 867-1076
Cow position:
Alignm length: 212
Alignm identity: 169
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 57, 112

Conread position: 867-1081
Cow position:
Alignm length: 217
Alignm identity: 170
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 113, 49

Conread position: 867-1081
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 109, 20

Conread position: 867-1081
Cow position:
Alignm length: 219
Alignm identity: 163
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 118, 40

Conread position: 867-1081
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 117, 13

Conread position: 867-1082
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 114, 144

Conread position: 867-1082
Cow position:
Alignm length: 218
Alignm identity: 166
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 49, 212

Conread position: 867-1084
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 117, 56

Conread position: 867-1084
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 48, 186

Conread position: 867-1084
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 110, 0

Conread position: 867-1085
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 867-1086
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 152, 114

Conread position: 867-1087
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 20

Conread position: 867-1087
Cow position:
Alignm length: 223
Alignm identity: 152
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 118, 52

Conread position: 867-1087
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 867-1087
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 106, 0

Conread position: 867-1087
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 867-1087
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 117, 41

Conread position: 867-1088
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 48, 59

Conread position: 867-1088
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 152, 49

Conread position: 867-1088
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 149, 40

Conread position: 867-1088
Cow position:
Alignm length: 223
Alignm identity: 152
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 117, 15

Conread position: 867-1088
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 59

Conread position: 867-1088
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 53, 213

Conread position: 867-1088
Cow position:
Alignm length: 225
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 57

Conread position: 867-1092
Cow position:
Alignm length: 227
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 211, 39

Conread position: 867-1104
Cow position:
Alignm length: 243
Alignm identity: 162
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 867-1106
Cow position:
Alignm length: 243
Alignm identity: 163
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 57

Conread position: 867-1110
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 867-1112
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 116, 161

Conread position: 868-1017
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 868-1072
Cow position:
Alignm length: 207
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 159

Conread position: 868-1087
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 113, 43

Conread position: 869-1076
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 178, 26

Conread position: 870-1074
Cow position:
Alignm length: 206
Alignm identity: 141
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 111, 17

Conread position: 870-1074
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 111, 0

Conread position: 870-1075
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 118

Conread position: 870-1075
Cow position:
Alignm length: 209
Alignm identity: 161
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 46, 0

Conread position: 870-1075
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 870-1076
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 870-1076
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 62, 193

Conread position: 870-1076
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 111, 186

Conread position: 870-1081
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 111, 180

Conread position: 870-1081
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 50, 190

Conread position: 870-1081
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 111, 40

Conread position: 870-1085
Cow position:
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 43

Conread position: 870-1087
Cow position:
Alignm length: 219
Alignm identity: 161
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 111, 52

Conread position: 870-1087
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 164, 46

Conread position: 870-1087
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 56, 161

Conread position: 870-1087
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 101, 37

Conread position: 870-1088
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 114, 11

Conread position: 871-1060
Cow position:
Alignm length: 192
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 131

Conread position: 871-1070
Cow position:
Alignm length: 201
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 871-1075
Cow position:
Alignm length: 208
Alignm identity: 158
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 110, 185

Conread position: 871-1087
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 114, 37

Conread position: 871-1089
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 49

Conread position: 872-1072
Cow position:
Alignm length: 201
Alignm identity: 137
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 872-1074
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 135

Conread position: 872-1082
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 58

Conread position: 872-1088
Cow position:
Alignm length: 221
Alignm identity: 150
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 41, 209

Conread position: 873-1075
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 108, 57

Conread position: 874-1072
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 49, 187

Conread position: 875-1041
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 875-1061
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 875-1074
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 109, 0

Conread position: 875-1081
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 109, 32

Conread position: 875-1131
Cow position:
Alignm length: 263
Alignm identity: 186
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 106, 0

Conread position: 876-1081
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 50

Conread position: 877-1074
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 153

Conread position: 877-1087
Cow position:
Alignm length: 217
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 104, 154

Conread position: 881-1054
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 31, 20

Conread position: 881-1071
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 103, 35

Conread position: 881-1075
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 63, 28

Conread position: 881-1076
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 102, 146

Conread position: 881-1081
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 162

Conread position: 881-1088
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 100, 23

Conread position: 881-1088
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 100, 42

Conread position: 882-1047
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 82, 30

Conread position: 882-1047
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 882-1069
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 882-1072
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 882-1081
Cow position:
Alignm length: 205
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 102, 41

Conread position: 882-1107
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 99, 177

Conread position: 887-1081
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 94, 31

Conread position: 887-1099
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 194

Conread position: 889-1053
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 145

Conread position: 893-1088
Cow position:
Alignm length: 197
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 150

Conread position: 905-1074
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 912-1081
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 16

Conread position: 917-1080
Cow position:
Alignm length: 166
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 64, 133

Conread position: 917-1082
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 52, 67

Conread position: 918-1082
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 14, 150

Conread position: 920-1076
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 139

Conread position: 925-1063
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 27

Conread position: 925-1068
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 56, 102

Conread position: 926-1081
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 58, 133

Conread position: 933-1081
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 124

Conread position: 935-1143
Cow position:
Alignm length: 211
Alignm identity: 142
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 142, 31

Conread position: 938-1082
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 46, 92

Show alignments to all cow chromosomes.