Cow genome map

Conread name: Ss1.1-Tra1-TCH01A040047.5

Conread position: 4-298
Cow position: chr12:15240672-15240966 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 30

Conread position: 4-304
Cow position: chr12:34148301-34148599 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 199, 38

Conread position: 6-143
Cow position: chr12:17252141-17252275 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 125, 33

Conread position: 6-186
Cow position: chr12:19261253-19261074 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 125, 33

Conread position: 6-201
Cow position: chr12:15089573-15089375 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 33

Conread position: 6-237
Cow position: chr12:19507695-19507451 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 123, 33

Conread position: 6-247
Cow position: chr12:38774185-38774431 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 119, 33

Conread position: 6-266
Cow position: chr12:12300977-12300717 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 90, 33

Conread position: 6-304
Cow position: chr12:17001316-17001010 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 33

Conread position: 6-304
Cow position: chr12:44595742-44596062 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 26, 194

Conread position: 7-113
Cow position: chr12:14986806-14986704 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 7-123
Cow position: chr12:33948961-33948849 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 7-131
Cow position: chr12:30819301-30819181 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 7-134
Cow position: chr12:45092503-45092380 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 7-138
Cow position: chr12:15641050-15641178 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 73, 32

Conread position: 7-142
Cow position: chr12:18513860-18514004 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 106

Conread position: 7-161
Cow position: chr12:37514224-37514382 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 125, 31

Conread position: 7-173
Cow position: chr12:18582936-18583104 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 116, 35

Conread position: 7-183
Cow position: chr12:7902742-7902924 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 32

Conread position: 7-183
Cow position: chr12:9766820-9767001 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 122, 25

Conread position: 7-200
Cow position: chr12:19274342-19274525 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 189, 22

Conread position: 7-201
Cow position: chr12:7110254-7110061 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 127, 32

Conread position: 7-201
Cow position: chr12:24032553-24032362 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 124, 32

Conread position: 7-201
Cow position: chr12:46120775-46120969 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 85, 24

Conread position: 7-202
Cow position: chr12:24116306-24116503 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 113, 32

Conread position: 7-217
Cow position: chr12:37169889-37170104 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 122, 32

Conread position: 7-231
Cow position: chr12:15703441-15703672 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 125, 22

Conread position: 7-244
Cow position: chr12:6485156-6485395 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 125, 32

Conread position: 7-254
Cow position: chr12:7884624-7884868 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 126, 35

Conread position: 7-260
Cow position: chr12:45965201-45965456 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 125, 47

Conread position: 7-262
Cow position: chr12:31429514-31429776 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 35

Conread position: 7-265
Cow position: chr12:30210540-30210273 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 79, 32

Conread position: 7-278
Cow position: chr12:33129311-33129042 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 98, 32

Conread position: 7-287
Cow position: chr12:24663171-24662884 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 124, 35

Conread position: 7-292
Cow position: chr12:32169597-32169300 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 120, 32

Conread position: 7-294
Cow position: chr12:39465636-39465340 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 125, 32

Conread position: 7-297
Cow position: chr12:27037393-27037689 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 35

Conread position: 7-297
Cow position: chr12:35378258-35377958 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 107, 31

Conread position: 7-298
Cow position: chr12:17881918-17881624 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 125, 32

Conread position: 7-300
Cow position: chr12:29770522-29770817 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 32

Conread position: 7-302
Cow position: chr12:5906113-5905811 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 32

Conread position: 7-302
Cow position: chr12:41084113-41083819 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 196, 35

Conread position: 7-303
Cow position: chr12:18518730-18518424 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 32

Conread position: 7-303
Cow position: chr12:18577897-18577602 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 25

Conread position: 7-303
Cow position: chr12:25561426-25561123 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 40

Conread position: 7-304
Cow position: chr12:5635396-5635696 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 131, 24

Conread position: 7-304
Cow position: chr12:5940398-5940095 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 81, 35

Conread position: 7-304
Cow position: chr12:6488936-6489225 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 122, 35

Conread position: 7-304
Cow position: chr12:8943167-8943468 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 125, 32

Conread position: 7-304
Cow position: chr12:9143444-9143145 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 121, 32

Conread position: 7-304
Cow position: chr12:15429539-15429848 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 125, 31

Conread position: 7-304
Cow position: chr12:15531111-15530815 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 122, 31

Conread position: 7-304
Cow position: chr12:17031671-17031373 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 228
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 122, 32

Conread position: 7-304
Cow position: chr12:18123726-18123438 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 31

Conread position: 7-304
Cow position: chr12:19502371-19502668 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 32

Conread position: 7-304
Cow position: chr12:19869518-19869223 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 122, 17

Conread position: 7-304
Cow position: chr12:24023745-24024039 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 195
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 32

Conread position: 7-304
Cow position: chr12:25805075-25805358 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 7-304
Cow position: chr12:30605109-30605404 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 113, 30

Conread position: 7-304
Cow position: chr12:30753776-30753474 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 123, 31

Conread position: 7-304
Cow position: chr12:30805915-30805610 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 63, 268

Conread position: 7-304
Cow position: chr12:32715101-32714794 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 125, 32

Conread position: 7-304
Cow position: chr12:41474146-41473847 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 207
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 31

Conread position: 7-304
Cow position: chr12:42879751-42879458 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 121, 32

Conread position: 7-304
Cow position: chr12:43942538-43942232 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 199

Conread position: 7-304
Cow position: chr12:47929257-47928967 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 198
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 173, 32

Conread position: 7-305
Cow position: chr12:9229443-9229731 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 196, 32

Conread position: 7-305
Cow position: chr12:18765916-18766230 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 117, 32

Conread position: 7-305
Cow position: chr12:40110428-40110140 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 162, 35

Conread position: 7-306
Cow position: chr12:30590824-30590526 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 217
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 74, 32

Conread position: 9-303
Cow position: chr12:30170724-30170420 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 30

Conread position: 10-132
Cow position: chr12:36261743-36261625 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 10-191
Cow position: chr12:17269856-17269670 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 118, 25

Conread position: 10-291
Cow position: chr12:4162301-4162606 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 34, 191

Conread position: 10-296
Cow position: chr12:9914843-9914551 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 122, 30

Conread position: 10-300
Cow position: chr12:22882110-22881806 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 119, 29

Conread position: 10-303
Cow position: chr12:33323442-33323746 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 122, 29

Conread position: 10-303
Cow position: chr12:42698192-42698470 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 185, 28

Conread position: 10-303
Cow position: chr12:44622402-44622112 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 126, 29

Conread position: 10-304
Cow position: chr12:4341690-4341968 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 200
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 122, 29

Conread position: 10-304
Cow position: chr12:5631828-5632122 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 122, 29

Conread position: 10-304
Cow position: chr12:5714683-5714380 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 113, 29

Conread position: 10-304
Cow position: chr12:11056930-11056628 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 29

Conread position: 10-304
Cow position: chr12:15122380-15122088 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 74, 29

Conread position: 11-130
Cow position: chr12:24166891-24167006 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 11-203
Cow position: chr12:3092527-3092717 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 181, 28

Conread position: 11-259
Cow position: chr12:17879249-17879505 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 118, 28

Conread position: 11-260
Cow position: chr12:25917223-25917467 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 130, 31

Conread position: 11-279
Cow position: chr12:33851410-33851135 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 125, 28

Conread position: 11-304
Cow position: chr12:17080313-17080010 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 124, 31

Conread position: 11-304
Cow position: chr12:26222937-26223234 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 117, 21

Conread position: 11-304
Cow position: chr12:37770923-37770627 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 120, 28

Conread position: 11-304
Cow position: chr12:44517686-44517983 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 121, 9

Conread position: 11-314
Cow position: chr12:6720381-6720061 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 28

Conread position: 12-134
Cow position: chr12:15260815-15260697 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 13-162
Cow position: chr12:27357438-27357299 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 13-302
Cow position: chr12:4008233-4008532 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 118, 29

Conread position: 13-304
Cow position: chr12:30438288-30438002 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 26

Conread position: 14-173
Cow position: chr12:47193974-47194133 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 106, 25

Conread position: 14-189
Cow position: chr12:16670317-16670138 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 25

Conread position: 14-260
Cow position: chr12:34673290-34673544 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 114, 25

Conread position: 15-165
Cow position: chr12:6235338-6235180 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 23

Conread position: 15-261
Cow position: chr12:11836283-11836028 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 110, 14

Conread position: 15-294
Cow position: chr12:20312120-20312405 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 48, 27

Conread position: 15-294
Cow position: chr12:44905676-44905402 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 164, 24

Conread position: 15-303
Cow position: chr12:20776876-20777178 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 113, 19

Conread position: 15-304
Cow position: chr12:2711547-2711244 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 206
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 24

Conread position: 15-304
Cow position: chr12:3950289-3950599 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 208
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 15-304
Cow position: chr12:6410685-6410976 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 40, 23

Conread position: 15-304
Cow position: chr12:8868833-8869131 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 208
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 92, 24

Conread position: 15-304
Cow position: chr12:24559407-24559105 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 99, 22

Conread position: 15-304
Cow position: chr12:48415467-48415761 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 214
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 117, 24

Conread position: 15-305
Cow position: chr12:18943609-18943893 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 108, 27

Conread position: 15-306
Cow position: chr12:29779865-29780152 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 64, 24

Conread position: 15-308
Cow position: chr12:25452398-25452697 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 117, 24

Conread position: 16-304
Cow position: chr12:28213557-28213270 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 122, 22

Conread position: 17-304
Cow position: chr12:31228619-31228326 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 112, 22

Conread position: 20-304
Cow position: chr12:17717109-17716835 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 111, 19

Conread position: 22-316
Cow position: chr12:22515683-22516001 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 215
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 79

Conread position: 24-289
Cow position: chr12:38454951-38454685 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 36

Conread position: 26-300
Cow position: chr12:5658032-5658320 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 11, 113

Conread position: 26-304
Cow position: chr12:11109799-11109521 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 100

Conread position: 26-304
Cow position: chr12:42967040-42966752 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 14, 59

Conread position: 27-304
Cow position: chr12:18388246-18388530 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 124

Conread position: 27-304
Cow position: chr12:42167675-42167397 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 11, 47

Conread position: 28-262
Cow position: chr12:18550921-18550676 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 82, 0

Conread position: 30-304
Cow position: chr12:30745754-30745465 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 103, 52

Conread position: 31-300
Cow position: chr12:730899-731179 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 85

Conread position: 31-304
Cow position: chr12:12331473-12331749 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 84, 69

Conread position: 33-302
Cow position: chr12:24211442-24211170 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 52, 98

Conread position: 33-302
Cow position: chr12:34007336-34007053 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 89, 43

Conread position: 35-304
Cow position: chr12:6241352-6241061 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 97, 143

Conread position: 36-265
Cow position: chr12:25177566-25177792 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 165, 49

Conread position: 36-276
Cow position: chr12:36544609-36544869 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 199
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 48, 0

Conread position: 36-293
Cow position: chr12:13156700-13156436 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 167, 80

Conread position: 36-295
Cow position: chr12:28471679-28471400 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 19, 233

Conread position: 36-296
Cow position: chr12:1889546-1889820 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 104, 75

Conread position: 36-302
Cow position: chr12:23574795-23574524 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 93, 129

Conread position: 36-302
Cow position: chr12:31532372-31532650 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 90, 43

Conread position: 36-304
Cow position: chr12:16605641-16605894 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 36-304
Cow position: chr12:19691202-19691486 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 36

Conread position: 36-304
Cow position: chr12:22285090-22285349 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 96, 166

Conread position: 36-304
Cow position: chr12:28582476-28582740 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 104, 43

Conread position: 36-304
Cow position: chr12:29969611-29969328 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 93, 0

Conread position: 37-277
Cow position: chr12:31948149-31947902 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 18, 214

Conread position: 37-293
Cow position: chr12:33458178-33457910 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 238

Conread position: 37-299
Cow position: chr12:18963897-18964173 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 92, 0

Conread position: 37-302
Cow position: chr12:37993701-37993972 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 154, 88

Conread position: 37-303
Cow position: chr12:29995433-29995708 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 103, 45

Conread position: 37-303
Cow position: chr12:35368673-35368396 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 95, 227

Conread position: 37-304
Cow position: chr12:6210127-6210405 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 92, 155

Conread position: 37-304
Cow position: chr12:10895522-10895796 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 86, 130

Conread position: 37-304
Cow position: chr12:12198881-12199154 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 87

Conread position: 37-304
Cow position: chr12:30661919-30662197 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 103, 0

Conread position: 38-286
Cow position: chr12:45820336-45820593 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 94, 161

Conread position: 38-304
Cow position: chr12:17774824-17774557 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 87, 154

Conread position: 38-310
Cow position: chr12:41581140-41580857 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 94, 21

Conread position: 39-285
Cow position: chr12:3906502-3906239 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 44

Conread position: 39-303
Cow position: chr12:36313881-36313618 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 92, 110

Conread position: 39-304
Cow position: chr12:27803021-27803298 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 89, 128

Conread position: 41-304
Cow position: chr12:18769043-18769322 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 194
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 52, 27

Conread position: 42-292
Cow position: chr12:15163165-15162914 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 161, 44

Conread position: 42-301
Cow position: chr12:6469034-6469289 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 173, 87

Conread position: 42-304
Cow position: chr12:18572650-18572393 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 103

Conread position: 42-304
Cow position: chr12:20326800-20326522 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 42-304
Cow position: chr12:23798125-23797855 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 27

Conread position: 42-304
Cow position: chr12:42282810-42283085 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 42-305
Cow position: chr12:26868788-26869048 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 157, 27

Conread position: 45-301
Cow position: chr12:2813250-2812977 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 129

Conread position: 45-304
Cow position: chr12:18040585-18040839 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 161, 84

Conread position: 46-303
Cow position: chr12:25320936-25320676 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 80, 34

Conread position: 47-304
Cow position: chr12:3056153-3055889 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 75, 7

Conread position: 47-304
Cow position: chr12:18420901-18421175 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 78, 130

Conread position: 48-304
Cow position: chr12:12178943-12178673 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 66

Conread position: 54-304
Cow position: chr12:6164008-6164277 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 78, 0

Conread position: 54-304
Cow position: chr12:26317479-26317218 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 77, 213

Conread position: 54-304
Cow position: chr12:39486438-39486181 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 72, 127

Conread position: 55-304
Cow position: chr12:28010896-28011147 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 148, 14

Conread position: 57-304
Cow position: chr12:3510572-3510315 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 30, 100

Conread position: 63-304
Cow position: chr12:8710826-8710583 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 84, 185

Conread position: 64-304
Cow position: chr12:44013836-44014088 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 69-304
Cow position: chr12:3579285-3579032 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 62, 29

Conread position: 70-304
Cow position: chr12:24107547-24107786 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 55, 149

Conread position: 81-304
Cow position: chr12:22047457-22047221 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 85-279
Cow position: chr12:4116472-4116270 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 61, 98

Conread position: 85-294
Cow position: chr12:30476465-30476239 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 85-302
Cow position: chr12:11583373-11583155 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 50, 173

Conread position: 85-304
Cow position: chr12:29411506-29411737 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 101

Conread position: 87-289
Cow position: chr12:38511863-38512075 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 92-303
Cow position: chr12:19372131-19372353 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 107

Conread position: 93-298
Cow position: chr12:24020685-24020479 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 51

Conread position: 95-304
Cow position: chr12:17702253-17702481 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 37, 86

Conread position: 95-304
Cow position: chr12:41214348-41214570 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 92

Conread position: 96-304
Cow position: chr12:32391820-32391597 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 97-304
Cow position: chr12:17495237-17495440 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 19

Conread position: 110-295
Cow position: chr12:4809261-4809066 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 123-278
Cow position: chr12:6117839-6117678 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 56, 13

Conread position: 124-304
Cow position: chr12:17008139-17007949 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 12

Conread position: 129-304
Cow position: chr12:5800966-5800787 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 49

Conread position: 130-300
Cow position: chr12:28559228-28559051 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 132-304
Cow position: chr12:16851079-16851257 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 137-304
Cow position: chr12:12017803-12017628 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 34

Conread position: 138-304
Cow position: chr12:44438934-44439099 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 140, 47

Conread position: 200-304
Cow position: chr12:29119755-29119651 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 209-304
Cow position: chr12:7109035-7108940 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 209-305
Cow position: chr12:14131893-14131993 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 0

Show alignments to all cow chromosomes.