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Cow genome map

           
Conread name:
           
Ss1.1-Tra1-TCH01A040047.5
        

               
Conread position:
               
4-304
               

               
Cow position:
               
chr25:6227131-6226829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
132, 35
               

               
Conread position:
               
5-303
               

               
Cow position:
               
chr25:34768637-34768931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
164, 37
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr25:21208875-21209160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
198, 34
               

               
Conread position:
               
6-301
               

               
Cow position:
               
chr25:23829035-23829327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 33
               

               
Conread position:
               
6-301
               

               
Cow position:
               
chr25:28187851-28188158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
117, 33
               

               
Conread position:
               
6-303
               

               
Cow position:
               
chr25:36762199-36761895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
117, 36
               

               
Conread position:
               
7-111
               

               
Cow position:
               
chr25:8347745-8347645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
7-111
               

               
Cow position:
               
chr25:23998831-23998931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
7-130
               

               
Cow position:
               
chr25:15463680-15463562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
7-134
               

               
Cow position:
               
chr25:18288676-18288798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
7-137
               

               
Cow position:
               
chr25:13222993-13222865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
122, 32
               

               
Conread position:
               
7-175
               

               
Cow position:
               
chr25:5920174-5920007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
129, 32
               

               
Conread position:
               
7-175
               

               
Cow position:
               
chr25:11823337-11823509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
123, 35
               

               
Conread position:
               
7-176
               

               
Cow position:
               
chr25:14809366-14809202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
7-176
               

               
Cow position:
               
chr25:23505145-23504969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
7-189
               

               
Cow position:
               
chr25:4948055-4947872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
121, 22
               

               
Conread position:
               
7-201
               

               
Cow position:
               
chr25:9843269-9843073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
129, 32
               

               
Conread position:
               
7-201
               

               
Cow position:
               
chr25:19363966-19364163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
125, 35
               

               
Conread position:
               
7-201
               

               
Cow position:
               
chr25:36872451-36872259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
125, 32
               

               
Conread position:
               
7-202
               

               
Cow position:
               
chr25:11432852-11433057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
122, 19
               

               
Conread position:
               
7-218
               

               
Cow position:
               
chr25:33457825-33457604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
122, 32
               

               
Conread position:
               
7-224
               

               
Cow position:
               
chr25:14157718-14157490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
113, 32
               

               
Conread position:
               
7-231
               

               
Cow position:
               
chr25:12509918-12510150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
129, 24
               

               
Conread position:
               
7-242
               

               
Cow position:
               
chr25:21668342-21668096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
120, 32
               

               
Conread position:
               
7-249
               

               
Cow position:
               
chr25:9107431-9107651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
125, 32
               

               
Conread position:
               
7-255
               

               
Cow position:
               
chr25:26679319-26679065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 34
               

               
Conread position:
               
7-256
               

               
Cow position:
               
chr25:21893431-21893174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
116, 24
               

               
Conread position:
               
7-268
               

               
Cow position:
               
chr25:23244909-23245185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
121, 32
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr25:32277514-32277777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
122, 32
               

               
Conread position:
               
7-285
               

               
Cow position:
               
chr25:14720837-14720559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr25:7750545-7750248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
124, 32
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr25:21191582-21191285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 31
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr25:22315298-22314999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
123, 32
               

               
Conread position:
               
7-295
               

               
Cow position:
               
chr25:9056271-9055992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
7-295
               

               
Cow position:
               
chr25:17704837-17704546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
196, 32
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr25:13272662-13272363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 32
               

               
Conread position:
               
7-300
               

               
Cow position:
               
chr25:14833568-14833864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
7-301
               

               
Cow position:
               
chr25:6682969-6683270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 32
               

               
Conread position:
               
7-301
               

               
Cow position:
               
chr25:35345103-35344829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
7-302
               

               
Cow position:
               
chr25:3992872-3992580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
7-303
               

               
Cow position:
               
chr25:7581334-7581639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
194, 118
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:2136443-2136139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:2624888-2624592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
187, 32
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:7216917-7216616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
93, 35
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:7306385-7306086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:7641357-7641666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:8120873-8120564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
116, 35
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:9990017-9990302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 30
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:10156662-10156379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 5
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:10949488-10949768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:11436714-11437014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 32
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:11585611-11585306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
118, 32
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:12778448-12778744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 32
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:12899820-12899543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
197, 32
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:15254255-15254543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 32
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:15714966-15714669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 32
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:17975285-17975579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
196, 32
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:18721027-18721317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
118, 24
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:19478768-19478476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
145, 32
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:20785495-20785796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 30
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:21245511-21245819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
125, 28
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:22531374-22531075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
121, 35
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:24573158-24572862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
116, 32
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:26238955-26238659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:27531178-27531479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:35826188-35826488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:36036686-36036992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 32
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr25:36081968-36081661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
118, 24
               

               
Conread position:
               
7-305
               

               
Cow position:
               
chr25:7008005-7007703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 32
               

               
Conread position:
               
7-315
               

               
Cow position:
               
chr25:35076623-35076899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
8-304
               

               
Cow position:
               
chr25:40321196-40321505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
117, 31
               

               
Conread position:
               
10-134
               

               
Cow position:
               
chr25:13768060-13767941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
10-137
               

               
Cow position:
               
chr25:14211719-14211596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
10-140
               

               
Cow position:
               
chr25:18810433-18810308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
10-175
               

               
Cow position:
               
chr25:40931363-40931198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
113, 29
               

               
Conread position:
               
10-270
               

               
Cow position:
               
chr25:22750917-22751187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
113, 29
               

               
Conread position:
               
10-273
               

               
Cow position:
               
chr25:38850403-38850665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 43
               

               
Conread position:
               
10-294
               

               
Cow position:
               
chr25:11661728-11662022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 32
               

               
Conread position:
               
10-298
               

               
Cow position:
               
chr25:22179006-22178715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 35
               

               
Conread position:
               
10-302
               

               
Cow position:
               
chr25:26089723-26090025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
115, 29
               

               
Conread position:
               
10-303
               

               
Cow position:
               
chr25:33691648-33691342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
116, 21
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr25:4547628-4547932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 29
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr25:12116909-12117201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
193, 29
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr25:15273763-15273477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 29
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr25:15377416-15377121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
122, 24
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr25:19129944-19129641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 14
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr25:20023296-20023605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
116, 29
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr25:21894795-21895098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
119, 29
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr25:30279118-30279419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
119, 29
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr25:34170036-34169742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
106, 21
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr25:36746360-36746658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
121, 19
               

               
Conread position:
               
11-127
               

               
Cow position:
               
chr25:36873244-36873356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
11-141
               

               
Cow position:
               
chr25:18929103-18929231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
120, 28
               

               
Conread position:
               
11-142
               

               
Cow position:
               
chr25:28597521-28597652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
11-150
               

               
Cow position:
               
chr25:7379058-7379191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
11-164
               

               
Cow position:
               
chr25:1840413-1840255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
11-185
               

               
Cow position:
               
chr25:7799636-7799466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
11-239
               

               
Cow position:
               
chr25:12609429-12609198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
121, 28
               

               
Conread position:
               
11-254
               

               
Cow position:
               
chr25:4521752-4521996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
121, 28
               

               
Conread position:
               
11-275
               

               
Cow position:
               
chr25:13443321-13443586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
11-304
               

               
Cow position:
               
chr25:6961064-6961362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
120, 28
               

               
Conread position:
               
11-304
               

               
Cow position:
               
chr25:25051288-25051596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
11-304
               

               
Cow position:
               
chr25:33550600-33550293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
12-139
               

               
Cow position:
               
chr25:35339101-35339227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
12-256
               

               
Cow position:
               
chr25:41150878-41151124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
129, 27
               

               
Conread position:
               
12-304
               

               
Cow position:
               
chr25:16319052-16319344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 27
               

               
Conread position:
               
13-229
               

               
Cow position:
               
chr25:20523147-20523367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
116, 23
               

               
Conread position:
               
13-289
               

               
Cow position:
               
chr25:17190660-17190935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
116, 18
               

               
Conread position:
               
13-304
               

               
Cow position:
               
chr25:16867328-16867017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
126, 34
               

               
Conread position:
               
14-304
               

               
Cow position:
               
chr25:14118177-14117897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
115, 21
               

               
Conread position:
               
14-307
               

               
Cow position:
               
chr25:11829837-11830111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
117, 25
               

               
Conread position:
               
15-304
               

               
Cow position:
               
chr25:20069802-20069508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 16
               

               
Conread position:
               
16-303
               

               
Cow position:
               
chr25:61734-61446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
187, 15
               

               
Conread position:
               
24-304
               

               
Cow position:
               
chr25:38425443-38425153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
26-304
               

               
Cow position:
               
chr25:6474006-6474311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
26-304
               

               
Cow position:
               
chr25:12817446-12817160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 52
               

               
Conread position:
               
26-304
               

               
Cow position:
               
chr25:17658692-17658402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
14, 179
               

               
Conread position:
               
26-304
               

               
Cow position:
               
chr25:37594487-37594202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
11, 177
               

               
Conread position:
               
28-304
               

               
Cow position:
               
chr25:35347979-35347692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 43
               

               
Conread position:
               
33-304
               

               
Cow position:
               
chr25:9642426-9642142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
33-304
               

               
Cow position:
               
chr25:19679426-19679130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
34-295
               

               
Cow position:
               
chr25:21267062-21266807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 96
               

               
Conread position:
               
34-304
               

               
Cow position:
               
chr25:24669374-24669643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
107, 64
               

               
Conread position:
               
35-231
               

               
Cow position:
               
chr25:24052035-24051824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 137
               

               
Conread position:
               
35-304
               

               
Cow position:
               
chr25:26087588-26087303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
36-269
               

               
Cow position:
               
chr25:26524024-26523788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
103, 45
               

               
Conread position:
               
36-300
               

               
Cow position:
               
chr25:4681298-4681025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
95, 36
               

               
Conread position:
               
36-303
               

               
Cow position:
               
chr25:18988458-18988165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
36-303
               

               
Cow position:
               
chr25:20461171-20460912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
132, 59
               

               
Conread position:
               
36-304
               

               
Cow position:
               
chr25:788327-788057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
96, 50
               

               
Conread position:
               
36-304
               

               
Cow position:
               
chr25:1838309-1838027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 233
               

               
Conread position:
               
36-304
               

               
Cow position:
               
chr25:5846741-5847019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
104, 222
               

               
Conread position:
               
36-304
               

               
Cow position:
               
chr25:11131652-11131369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
36-304
               

               
Cow position:
               
chr25:14196931-14196644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
36-304
               

               
Cow position:
               
chr25:26701095-26700826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
96, 36
               

               
Conread position:
               
37-281
               

               
Cow position:
               
chr25:18905952-18905692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
37-294
               

               
Cow position:
               
chr25:3145911-3145638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
37-294
               

               
Cow position:
               
chr25:8576761-8576491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
37-303
               

               
Cow position:
               
chr25:20076564-20076286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
88, 207
               

               
Conread position:
               
37-304
               

               
Cow position:
               
chr25:10504274-10504547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
37-304
               

               
Cow position:
               
chr25:18564553-18564283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
37-304
               

               
Cow position:
               
chr25:20019936-20020199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
37-304
               

               
Cow position:
               
chr25:35612246-35612509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
82, 142
               

               
Conread position:
               
37-305
               

               
Cow position:
               
chr25:16064959-16064683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
95, 218
               

               
Conread position:
               
38-271
               

               
Cow position:
               
chr25:12081256-12081496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 44
               

               
Conread position:
               
38-304
               

               
Cow position:
               
chr25:5836890-5837178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
38-304
               

               
Cow position:
               
chr25:33256419-33256156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
91, 54
               

               
Conread position:
               
39-303
               

               
Cow position:
               
chr25:32191725-32191458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 27
               

               
Conread position:
               
40-294
               

               
Cow position:
               
chr25:17914845-17914578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
7, 67
               

               
Conread position:
               
41-301
               

               
Cow position:
               
chr25:14467030-14467295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
41-304
               

               
Cow position:
               
chr25:23410722-23410451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
41-304
               

               
Cow position:
               
chr25:24405670-24405948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
41-304
               

               
Cow position:
               
chr25:30319391-30319661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
42-231
               

               
Cow position:
               
chr25:16570664-16570476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
42-254
               

               
Cow position:
               
chr25:9002734-9002513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
42-292
               

               
Cow position:
               
chr25:20133252-20133515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
42-301
               

               
Cow position:
               
chr25:13325642-13325390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 143
               

               
Conread position:
               
42-304
               

               
Cow position:
               
chr25:6463969-6464241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
42-304
               

               
Cow position:
               
chr25:10217987-10218263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
43-304
               

               
Cow position:
               
chr25:12293685-12293963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
43-304
               

               
Cow position:
               
chr25:16921735-16922006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
5, 118
               

               
Conread position:
               
43-304
               

               
Cow position:
               
chr25:17566649-17566375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
5, 223
               

               
Conread position:
               
43-304
               

               
Cow position:
               
chr25:21289407-21289128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
45-202
               

               
Cow position:
               
chr25:26642646-26642480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
45-224
               

               
Cow position:
               
chr25:7449859-7449676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
158, 91
               

               
Conread position:
               
45-304
               

               
Cow position:
               
chr25:40956925-40957199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
76, 257
               

               
Conread position:
               
46-227
               

               
Cow position:
               
chr25:4245735-4245555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
47-304
               

               
Cow position:
               
chr25:2194988-2194733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
156, 36
               

               
Conread position:
               
47-304
               

               
Cow position:
               
chr25:10643252-10643522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
53-302
               

               
Cow position:
               
chr25:9956987-9957242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
70, 203
               

               
Conread position:
               
55-302
               

               
Cow position:
               
chr25:6885922-6886187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
58-304
               

               
Cow position:
               
chr25:21192884-21193156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
74, 48
               

               
Conread position:
               
64-304
               

               
Cow position:
               
chr25:12239107-12239360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
65-303
               

               
Cow position:
               
chr25:1735281-1735527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
21, 16
               

               
Conread position:
               
69-304
               

               
Cow position:
               
chr25:14266483-14266716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 119
               

               
Conread position:
               
69-304
               

               
Cow position:
               
chr25:14791792-14791540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
69-304
               

               
Cow position:
               
chr25:38972863-38972621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 8
               

               
Conread position:
               
69-305
               

               
Cow position:
               
chr25:12319308-12319551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 180
               

               
Conread position:
               
70-300
               

               
Cow position:
               
chr25:40388431-40388666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
72-302
               

               
Cow position:
               
chr25:8512064-8512305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 22
               

               
Conread position:
               
72-303
               

               
Cow position:
               
chr25:6891503-6891730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
125, 48
               

               
Conread position:
               
72-304
               

               
Cow position:
               
chr25:7801173-7800924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
73-304
               

               
Cow position:
               
chr25:25827502-25827250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
77-300
               

               
Cow position:
               
chr25:26269910-26270142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
83-301
               

               
Cow position:
               
chr25:10330391-10330611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
55, 99
               

               
Conread position:
               
83-304
               

               
Cow position:
               
chr25:36033459-36033224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
85-276
               

               
Cow position:
               
chr25:20211061-20211261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
47, 87
               

               
Conread position:
               
85-304
               

               
Cow position:
               
chr25:18934878-18935086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
171, 44
               

               
Conread position:
               
92-252
               

               
Cow position:
               
chr25:11054916-11054746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 91
               

               
Conread position:
               
95-304
               

               
Cow position:
               
chr25:35340339-35340120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
97-304
               

               
Cow position:
               
chr25:8918269-8918490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
97-304
               

               
Cow position:
               
chr25:9961166-9961390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
97-304
               

               
Cow position:
               
chr25:16001518-16001732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
44, 156
               

               
Conread position:
               
97-304
               

               
Cow position:
               
chr25:36027008-36026795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
98-303
               

               
Cow position:
               
chr25:15694987-15694773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
100-301
               

               
Cow position:
               
chr25:35625180-35625385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
100-304
               

               
Cow position:
               
chr25:7329553-7329332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
100-304
               

               
Cow position:
               
chr25:31732730-31732948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
31, 143
               

               
Conread position:
               
104-304
               

               
Cow position:
               
chr25:11978707-11978911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
122-304
               

               
Cow position:
               
chr25:15319898-15319708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 50
               

               
Conread position:
               
127-304
               

               
Cow position:
               
chr25:12234792-12234970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
128-304
               

               
Cow position:
               
chr25:20395162-20394990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
130-301
               

               
Cow position:
               
chr25:2126434-2126259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 76
               

               
Conread position:
               
131-304
               

               
Cow position:
               
chr25:6815210-6815036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
131-305
               

               
Cow position:
               
chr25:10365785-10365965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
72, 40
               

               
Conread position:
               
133-304
               

               
Cow position:
               
chr25:12204435-12204258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 116
               

               
Conread position:
               
137-301
               

               
Cow position:
               
chr25:30035507-30035339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
137-305
               

               
Cow position:
               
chr25:6424626-6424801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
138-306
               

               
Cow position:
               
chr25:9396405-9396236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 47
               

               
Conread position:
               
143-304
               

               
Cow position:
               
chr25:10138046-10137886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 42
               

               
Conread position:
               
147-304
               

               
Cow position:
               
chr25:24452226-24452382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 30
               

               
Conread position:
               
158-304
               

               
Cow position:
               
chr25:6003051-6003203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
202-304
               

               
Cow position:
               
chr25:9842894-9842789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 93
               

               
Conread position:
               
204-320
               

               
Cow position:
               
chr25:33556855-33556739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.