Cow genome map

Conread name: Ss1.1-Tra1-TCH01A040047.5

Conread position: 6-304
Cow position:
Alignm length: 313
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 33

Conread position: 6-304
Cow position:
Alignm length: 321
Alignm identity: 230
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 86, 36

Conread position: 7-127
Cow position:
Alignm length: 121
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 7-130
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 7-134
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 7-134
Cow position:
Alignm length: 128
Alignm identity: 104
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 7-143
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 123, 31

Conread position: 7-163
Cow position:
Alignm length: 161
Alignm identity: 127
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 125, 32

Conread position: 7-175
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 7-179
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 32

Conread position: 7-185
Cow position:
Alignm length: 184
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 114, 32

Conread position: 7-201
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 125, 32

Conread position: 7-207
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 125, 32

Conread position: 7-208
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 160, 32

Conread position: 7-218
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 116, 32

Conread position: 7-221
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 171, 27

Conread position: 7-253
Cow position:
Alignm length: 259
Alignm identity: 187
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 115, 30

Conread position: 7-254
Cow position:
Alignm length: 262
Alignm identity: 193
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 116, 32

Conread position: 7-256
Cow position:
Alignm length: 264
Alignm identity: 199
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 125, 24

Conread position: 7-256
Cow position:
Alignm length: 272
Alignm identity: 200
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 82, 32

Conread position: 7-261
Cow position:
Alignm length: 269
Alignm identity: 205
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 122, 31

Conread position: 7-263
Cow position:
Alignm length: 267
Alignm identity: 190
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 116, 39

Conread position: 7-264
Cow position:
Alignm length: 272
Alignm identity: 183
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 32

Conread position: 7-288
Cow position:
Alignm length: 295
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 33

Conread position: 7-290
Cow position:
Alignm length: 290
Alignm identity: 194
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 122, 24

Conread position: 7-295
Cow position:
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 32

Conread position: 7-298
Cow position:
Alignm length: 298
Alignm identity: 216
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 125, 22

Conread position: 7-302
Cow position:
Alignm length: 310
Alignm identity: 217
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 114, 32

Conread position: 7-303
Cow position:
Alignm length: 311
Alignm identity: 221
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 122, 35

Conread position: 7-304
Cow position:
Alignm length: 304
Alignm identity: 207
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 196, 32

Conread position: 7-304
Cow position:
Alignm length: 314
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 32

Conread position: 7-304
Cow position:
Alignm length: 311
Alignm identity: 212
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 32

Conread position: 7-304
Cow position:
Alignm length: 318
Alignm identity: 223
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 115, 32

Conread position: 7-304
Cow position:
Alignm length: 312
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 32

Conread position: 7-304
Cow position:
Alignm length: 312
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 32

Conread position: 7-304
Cow position:
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 24

Conread position: 7-304
Cow position:
Alignm length: 310
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 32

Conread position: 7-304
Cow position:
Alignm length: 307
Alignm identity: 226
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 119, 32

Conread position: 7-305
Cow position:
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 38

Conread position: 7-305
Cow position:
Alignm length: 318
Alignm identity: 229
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 122, 27

Conread position: 7-305
Cow position:
Alignm length: 316
Alignm identity: 229
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 111, 32

Conread position: 7-306
Cow position:
Alignm length: 318
Alignm identity: 227
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 110, 29

Conread position: 7-311
Cow position:
Alignm length: 315
Alignm identity: 213
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 122, 32

Conread position: 9-289
Cow position:
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 30

Conread position: 10-201
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 121, 29

Conread position: 10-219
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 29

Conread position: 10-248
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 124, 29

Conread position: 10-302
Cow position:
Alignm length: 308
Alignm identity: 221
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 121, 29

Conread position: 10-303
Cow position:
Alignm length: 305
Alignm identity: 205
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 94, 29

Conread position: 10-304
Cow position:
Alignm length: 302
Alignm identity: 212
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 161, 29

Conread position: 10-304
Cow position:
Alignm length: 303
Alignm identity: 211
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 66, 29

Conread position: 11-169
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 11-270
Cow position:
Alignm length: 273
Alignm identity: 197
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 121, 28

Conread position: 11-304
Cow position:
Alignm length: 314
Alignm identity: 223
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 65, 28

Conread position: 11-304
Cow position:
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 28

Conread position: 11-305
Cow position:
Alignm length: 314
Alignm identity: 220
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 99, 27

Conread position: 13-252
Cow position:
Alignm length: 250
Alignm identity: 186
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 76, 25

Conread position: 13-303
Cow position:
Alignm length: 303
Alignm identity: 208
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 125, 26

Conread position: 15-288
Cow position:
Alignm length: 286
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 114, 27

Conread position: 15-304
Cow position:
Alignm length: 306
Alignm identity: 210
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 117, 24

Conread position: 17-302
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 187, 25

Conread position: 22-305
Cow position:
Alignm length: 308
Alignm identity: 212
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 139

Conread position: 23-260
Cow position:
Alignm length: 252
Alignm identity: 171
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 109, 174

Conread position: 31-297
Cow position:
Alignm length: 284
Alignm identity: 196
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 101, 0

Conread position: 33-303
Cow position:
Alignm length: 285
Alignm identity: 203
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 96, 51

Conread position: 36-254
Cow position:
Alignm length: 228
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 96, 192

Conread position: 36-304
Cow position:
Alignm length: 284
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 146

Conread position: 36-304
Cow position:
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 36-304
Cow position:
Alignm length: 284
Alignm identity: 209
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 95, 149

Conread position: 37-229
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 37-270
Cow position:
Alignm length: 246
Alignm identity: 167
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 94, 198

Conread position: 37-292
Cow position:
Alignm length: 266
Alignm identity: 177
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 32

Conread position: 37-304
Cow position:
Alignm length: 275
Alignm identity: 188
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 102, 178

Conread position: 37-304
Cow position:
Alignm length: 278
Alignm identity: 187
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 106, 122

Conread position: 37-304
Cow position:
Alignm length: 281
Alignm identity: 195
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 92, 216

Conread position: 37-304
Cow position:
Alignm length: 284
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 220

Conread position: 37-305
Cow position:
Alignm length: 281
Alignm identity: 188
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 38-305
Cow position:
Alignm length: 275
Alignm identity: 187
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 165, 88

Conread position: 41-301
Cow position:
Alignm length: 271
Alignm identity: 178
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 243

Conread position: 41-301
Cow position:
Alignm length: 272
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 151, 36

Conread position: 41-302
Cow position:
Alignm length: 277
Alignm identity: 185
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 212

Conread position: 41-304
Cow position:
Alignm length: 270
Alignm identity: 180
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 83, 109

Conread position: 41-304
Cow position:
Alignm length: 281
Alignm identity: 198
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 68, 38

Conread position: 42-290
Cow position:
Alignm length: 263
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 233

Conread position: 42-303
Cow position:
Alignm length: 271
Alignm identity: 186
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 90, 214

Conread position: 42-303
Cow position:
Alignm length: 263
Alignm identity: 176
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 147, 86

Conread position: 42-303
Cow position:
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 142

Conread position: 42-304
Cow position:
Alignm length: 280
Alignm identity: 193
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 96, 135

Conread position: 43-302
Cow position:
Alignm length: 268
Alignm identity: 182
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 5, 84

Conread position: 45-304
Cow position:
Alignm length: 275
Alignm identity: 184
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 54-304
Cow position:
Alignm length: 258
Alignm identity: 180
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 68, 62

Conread position: 54-304
Cow position:
Alignm length: 260
Alignm identity: 189
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 77, 26

Conread position: 54-304
Cow position:
Alignm length: 267
Alignm identity: 184
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 55-303
Cow position:
Alignm length: 257
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 76

Conread position: 56-304
Cow position:
Alignm length: 256
Alignm identity: 175
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 48, 134

Conread position: 61-304
Cow position:
Alignm length: 267
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 68, 0

Conread position: 64-304
Cow position:
Alignm length: 248
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 106

Conread position: 67-287
Cow position:
Alignm length: 231
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 49

Conread position: 72-304
Cow position:
Alignm length: 248
Alignm identity: 173
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 111

Conread position: 83-253
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 116

Conread position: 83-299
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 93

Conread position: 85-304
Cow position:
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 118

Conread position: 86-261
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 83

Conread position: 89-295
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 57

Conread position: 92-304
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 95-303
Cow position:
Alignm length: 217
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 109

Conread position: 97-304
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 98

Conread position: 101-304
Cow position:
Alignm length: 214
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 86

Conread position: 103-304
Cow position:
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 124-278
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 52

Conread position: 124-303
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 12

Conread position: 124-304
Cow position:
Alignm length: 187
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 11

Show alignments to all cow chromosomes.