Cow genome map

Conread name: Ss1.1-Tra1-TCH01A040047.5

Conread position: 4-304
Cow position: chrX:10411862-10412172 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 130, 6

Conread position: 5-305
Cow position: chrX:10831362-10831681 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 9

Conread position: 6-169
Cow position: chrX:40531920-40532086 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 120, 33

Conread position: 6-201
Cow position: chrX:4515813-4515610 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 33

Conread position: 6-204
Cow position: chrX:18272935-18273135 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 123, 33

Conread position: 6-252
Cow position: chrX:19273584-19273854 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 125, 33

Conread position: 6-260
Cow position: chrX:616136-616401 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 123, 36

Conread position: 6-303
Cow position: chrX:22074923-22074618 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 53

Conread position: 6-303
Cow position: chrX:35273487-35273170 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 51, 36

Conread position: 6-303
Cow position: chrX:38853320-38853014 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 33

Conread position: 6-304
Cow position: chrX:878257-878555 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 123, 33

Conread position: 6-304
Cow position: chrX:10959272-10959584 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 125, 32

Conread position: 6-304
Cow position: chrX:35543010-35542708 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 126, 33

Conread position: 7-134
Cow position: chrX:29501762-29501882 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 7-137
Cow position: chrX:2936079-2935954 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 7-140
Cow position: chrX:16984762-16984632 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 124, 13

Conread position: 7-143
Cow position: chrX:4289566-4289430 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 35

Conread position: 7-161
Cow position: chrX:28940367-28940212 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 109, 32

Conread position: 7-170
Cow position: chrX:11325976-11326143 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 118, 17

Conread position: 7-171
Cow position: chrX:6599660-6599828 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 125, 32

Conread position: 7-172
Cow position: chrX:27306576-27306407 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 122, 24

Conread position: 7-175
Cow position: chrX:22392862-22393034 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 122, 32

Conread position: 7-176
Cow position: chrX:5134594-5134426 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 124, 30

Conread position: 7-176
Cow position: chrX:25328494-25328655 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 7-194
Cow position: chrX:46429697-46429888 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 122, 32

Conread position: 7-197
Cow position: chrX:5135397-5135595 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 125, 0

Conread position: 7-199
Cow position: chrX:4152909-4153107 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 129, 32

Conread position: 7-201
Cow position: chrX:19469384-19469574 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 121, 32

Conread position: 7-217
Cow position: chrX:11851557-11851765 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 22

Conread position: 7-230
Cow position: chrX:29230121-29229901 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 196, 22

Conread position: 7-234
Cow position: chrX:9650902-9651138 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 124, 31

Conread position: 7-235
Cow position: chrX:42927702-42927933 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 122, 32

Conread position: 7-241
Cow position: chrX:26881443-26881688 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 129, 32

Conread position: 7-246
Cow position: chrX:30337836-30338064 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 196, 24

Conread position: 7-249
Cow position: chrX:34315643-34315396 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 24

Conread position: 7-251
Cow position: chrX:43115272-43115021 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 125, 32

Conread position: 7-252
Cow position: chrX:31294450-31294688 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 0

Conread position: 7-253
Cow position: chrX:40685206-40685463 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 122, 35

Conread position: 7-255
Cow position: chrX:12437150-12437385 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 118, 32

Conread position: 7-256
Cow position: chrX:5919618-5919361 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 122, 0

Conread position: 7-257
Cow position: chrX:37986347-37986097 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 125, 32

Conread position: 7-257
Cow position: chrX:41871189-41870937 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 129, 32

Conread position: 7-257
Cow position: chrX:45977048-45976784 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 125, 31

Conread position: 7-265
Cow position: chrX:11084942-11085201 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 196, 32

Conread position: 7-270
Cow position: chrX:21986169-21986441 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 131, 32

Conread position: 7-281
Cow position: chrX:14275621-14275893 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 117, 35

Conread position: 7-284
Cow position: chrX:20584450-20584160 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 32

Conread position: 7-284
Cow position: chrX:41068847-41068564 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 122, 30

Conread position: 7-285
Cow position: chrX:37072511-37072241 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 134, 31

Conread position: 7-290
Cow position: chrX:40269614-40269315 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 225
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 60, 32

Conread position: 7-292
Cow position: chrX:27145726-27145452 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 32

Conread position: 7-292
Cow position: chrX:34792190-34792482 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 124, 32

Conread position: 7-293
Cow position: chrX:169424-169698 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 125, 32

Conread position: 7-301
Cow position: chrX:45502268-45501968 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 92, 34

Conread position: 7-302
Cow position: chrX:30543162-30543472 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 122, 35

Conread position: 7-303
Cow position: chrX:4996709-4996426 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 196, 37

Conread position: 7-303
Cow position: chrX:34402128-34401815 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 7-303
Cow position: chrX:37232529-37232227 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 32

Conread position: 7-303
Cow position: chrX:47248656-47248967 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 52

Conread position: 7-304
Cow position: chrX:6414163-6413863 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 220
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 124, 32

Conread position: 7-304
Cow position: chrX:6544376-6544073 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 122, 32

Conread position: 7-304
Cow position: chrX:6690138-6690431 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 126, 32

Conread position: 7-304
Cow position: chrX:7278033-7277736 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 122, 35

Conread position: 7-304
Cow position: chrX:7513609-7513331 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 225
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 196, 32

Conread position: 7-304
Cow position: chrX:9201670-9201363 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 24

Conread position: 7-304
Cow position: chrX:9635069-9635364 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 124, 38

Conread position: 7-304
Cow position: chrX:11656203-11655905 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 32

Conread position: 7-304
Cow position: chrX:11938811-11939110 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 35

Conread position: 7-304
Cow position: chrX:12979712-12980014 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 125, 31

Conread position: 7-304
Cow position: chrX:17726097-17725791 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 32

Conread position: 7-304
Cow position: chrX:17795103-17794802 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 117, 32

Conread position: 7-304
Cow position: chrX:23091993-23091698 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 32

Conread position: 7-304
Cow position: chrX:23497569-23497848 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 196, 32

Conread position: 7-304
Cow position: chrX:24424279-24424571 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 184, 30

Conread position: 7-304
Cow position: chrX:27431796-27432102 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 32

Conread position: 7-304
Cow position: chrX:29601706-29602016 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 122, 35

Conread position: 7-304
Cow position: chrX:31312151-31311842 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 32

Conread position: 7-304
Cow position: chrX:31436596-31436299 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 32

Conread position: 7-304
Cow position: chrX:33493898-33493591 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 124, 32

Conread position: 7-304
Cow position: chrX:33855098-33855416 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 232
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 107, 32

Conread position: 7-304
Cow position: chrX:34411968-34411657 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 32

Conread position: 7-304
Cow position: chrX:34565406-34565109 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 125, 32

Conread position: 7-304
Cow position: chrX:35224418-35224116 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 117, 32

Conread position: 7-304
Cow position: chrX:35382915-35383203 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 196, 30

Conread position: 7-304
Cow position: chrX:36068137-36067836 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 35

Conread position: 7-304
Cow position: chrX:37574962-37574673 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 32

Conread position: 7-304
Cow position: chrX:38094398-38094709 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 223
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 116, 32

Conread position: 7-304
Cow position: chrX:38218838-38218524 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 116, 22

Conread position: 7-304
Cow position: chrX:38549569-38549265 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 31

Conread position: 7-304
Cow position: chrX:38642371-38642074 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 31

Conread position: 7-304
Cow position: chrX:39558227-39558530 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 116, 32

Conread position: 7-304
Cow position: chrX:40035318-40035628 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 32

Conread position: 7-304
Cow position: chrX:40557557-40557859 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 35

Conread position: 7-304
Cow position: chrX:41192826-41192501 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 111, 35

Conread position: 7-304
Cow position: chrX:41526407-41526707 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 122, 32

Conread position: 7-304
Cow position: chrX:42380990-42381283 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 32

Conread position: 7-304
Cow position: chrX:42469819-42470120 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 77, 32

Conread position: 7-304
Cow position: chrX:43730102-43730398 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 215
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 125, 22

Conread position: 7-304
Cow position: chrX:45110778-45110472 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 233
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 42, 32

Conread position: 7-304
Cow position: chrX:45846223-45845912 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 122, 32

Conread position: 7-304
Cow position: chrX:46072695-46073004 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 116, 38

Conread position: 7-305
Cow position: chrX:1466284-1466003 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 122, 32

Conread position: 7-305
Cow position: chrX:5017300-5017592 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 202
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 22

Conread position: 7-305
Cow position: chrX:7695871-7695575 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 230
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 112, 32

Conread position: 7-305
Cow position: chrX:34532642-34532344 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 32

Conread position: 7-314
Cow position: chrX:22387128-22387442 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 127, 27

Conread position: 7-326
Cow position: chrX:32821150-32820825 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 134, 24

Conread position: 10-134
Cow position: chrX:4467086-4466966 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 10-137
Cow position: chrX:16836170-16836289 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 10-153
Cow position: chrX:4615892-4616035 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 104, 7

Conread position: 10-165
Cow position: chrX:29585238-29585082 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 29

Conread position: 10-167
Cow position: chrX:12082205-12082365 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 137
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 121, 29

Conread position: 10-167
Cow position: chrX:19394672-19394512 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 122, 29

Conread position: 10-175
Cow position: chrX:20957357-20957200 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 10-217
Cow position: chrX:34836945-34837150 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 122, 29

Conread position: 10-231
Cow position: chrX:46291264-46291029 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 151

Conread position: 10-265
Cow position: chrX:38066336-38066594 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 122, 32

Conread position: 10-300
Cow position: chrX:19690334-19690038 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 100, 25

Conread position: 10-302
Cow position: chrX:27393907-27394195 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 119, 29

Conread position: 10-303
Cow position: chrX:13177357-13177647 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 29

Conread position: 10-303
Cow position: chrX:32623690-32623400 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 202
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 245, 29

Conread position: 10-304
Cow position: chrX:4043748-4044034 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 128, 29

Conread position: 10-304
Cow position: chrX:5638039-5638353 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 10-304
Cow position: chrX:8797368-8797064 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 82, 29

Conread position: 10-304
Cow position: chrX:9416565-9416876 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 122, 29

Conread position: 10-304
Cow position: chrX:11082503-11082797 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 115, 29

Conread position: 10-304
Cow position: chrX:15147078-15147370 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 193, 32

Conread position: 10-304
Cow position: chrX:16283825-16284130 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 208
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 7

Conread position: 10-304
Cow position: chrX:18694812-18695103 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 115, 29

Conread position: 10-304
Cow position: chrX:34503039-34502735 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 119, 29

Conread position: 10-304
Cow position: chrX:35387808-35388089 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 191, 21

Conread position: 10-304
Cow position: chrX:38006651-38006951 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 29

Conread position: 10-304
Cow position: chrX:40480747-40481056 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 32, 61

Conread position: 10-305
Cow position: chrX:8925818-8925521 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 115, 29

Conread position: 11-130
Cow position: chrX:27668840-27668954 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 103
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 11-196
Cow position: chrX:22115199-22115385 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 121, 26

Conread position: 11-202
Cow position: chrX:2523564-2523756 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 121, 28

Conread position: 11-261
Cow position: chrX:48014553-48014301 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 13

Conread position: 11-265
Cow position: chrX:34314142-34313889 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 99, 28

Conread position: 11-273
Cow position: chrX:5118380-5118654 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 74, 28

Conread position: 11-304
Cow position: chrX:8869284-8869592 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 116, 28

Conread position: 11-304
Cow position: chrX:9252045-9252361 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 117, 28

Conread position: 11-304
Cow position: chrX:13647667-13647967 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 28

Conread position: 11-304
Cow position: chrX:37780991-37781301 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 28

Conread position: 13-175
Cow position: chrX:35985934-35985770 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 26

Conread position: 13-257
Cow position: chrX:7710423-7710679 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 119, 31

Conread position: 13-286
Cow position: chrX:44397125-44396856 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 116, 28

Conread position: 13-294
Cow position: chrX:34377058-34376782 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 120, 26

Conread position: 13-303
Cow position: chrX:26625555-26625859 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 116, 26

Conread position: 13-304
Cow position: chrX:11073075-11073372 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 26

Conread position: 13-304
Cow position: chrX:14883839-14884145 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 115, 22

Conread position: 13-304
Cow position: chrX:41884296-41884601 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 116, 26

Conread position: 14-202
Cow position: chrX:47345442-47345259 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 14-299
Cow position: chrX:45429907-45430195 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 117, 19

Conread position: 14-304
Cow position: chrX:7722103-7721801 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 66, 25

Conread position: 15-260
Cow position: chrX:11614807-11614560 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 114, 24

Conread position: 15-270
Cow position: chrX:29680147-29680409 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 111, 23

Conread position: 15-300
Cow position: chrX:28111623-28111327 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 17

Conread position: 15-301
Cow position: chrX:38936814-38936520 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 78, 23

Conread position: 15-302
Cow position: chrX:41123173-41122890 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 108, 23

Conread position: 15-303
Cow position: chrX:23785760-23785471 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 108, 19

Conread position: 15-303
Cow position: chrX:42492409-42492697 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 160, 24

Conread position: 15-304
Cow position: chrX:161526-161238 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 108, 23

Conread position: 15-304
Cow position: chrX:11717669-11717966 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 213
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 114, 24

Conread position: 15-304
Cow position: chrX:15007035-15007334 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 114, 23

Conread position: 15-304
Cow position: chrX:17964408-17964706 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 111, 24

Conread position: 15-304
Cow position: chrX:20801883-20801596 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 196
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 22

Conread position: 15-304
Cow position: chrX:31260500-31260813 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 209
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 15-304
Cow position: chrX:31442715-31443005 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 35, 24

Conread position: 15-304
Cow position: chrX:42235410-42235717 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 114, 24

Conread position: 15-304
Cow position: chrX:43049445-43049161 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 185, 24

Conread position: 15-306
Cow position: chrX:31252521-31252232 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 117, 24

Conread position: 16-303
Cow position: chrX:1615930-1616230 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 21

Conread position: 16-303
Cow position: chrX:7509252-7508957 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 113, 23

Conread position: 16-303
Cow position: chrX:7572018-7571724 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 113, 23

Conread position: 17-252
Cow position: chrX:34504936-34505178 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 22

Conread position: 17-295
Cow position: chrX:32310218-32309931 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 195
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 109, 18

Conread position: 20-231
Cow position: chrX:29194338-29194124 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 109, 19

Conread position: 25-304
Cow position: chrX:17542067-17541780 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 104, 22

Conread position: 26-256
Cow position: chrX:41027269-41027022 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 26-303
Cow position: chrX:6278388-6278688 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 26-304
Cow position: chrX:36976061-36975766 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 84

Conread position: 26-304
Cow position: chrX:42247072-42247367 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 233

Conread position: 26-304
Cow position: chrX:46587932-46587634 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 200
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 231

Conread position: 26-305
Cow position: chrX:27175108-27174811 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 27-257
Cow position: chrX:15815192-15814951 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 156

Conread position: 29-304
Cow position: chrX:42171190-42171483 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 102, 0

Conread position: 30-304
Cow position: chrX:20339788-20340074 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 10, 82

Conread position: 32-304
Cow position: chrX:25338291-25337996 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 33-304
Cow position: chrX:17662498-17662780 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 97, 31

Conread position: 33-304
Cow position: chrX:27446786-27446505 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 148, 96

Conread position: 33-304
Cow position: chrX:28865906-28866176 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 81, 45

Conread position: 36-275
Cow position: chrX:23561955-23561723 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 158

Conread position: 36-286
Cow position: chrX:45670319-45670068 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 103

Conread position: 36-298
Cow position: chrX:47186227-47186498 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 93, 145

Conread position: 36-300
Cow position: chrX:1514322-1514580 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 52

Conread position: 36-302
Cow position: chrX:13382421-13382144 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 89, 27

Conread position: 36-303
Cow position: chrX:22482594-22482871 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 50, 33

Conread position: 36-303
Cow position: chrX:22624573-22624296 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 158

Conread position: 36-303
Cow position: chrX:43779750-43780035 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 36-303
Cow position: chrX:45993327-45993036 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 36-304
Cow position: chrX:1499762-1499486 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 95, 146

Conread position: 36-304
Cow position: chrX:13913172-13912897 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 216
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 69, 142

Conread position: 36-304
Cow position: chrX:23513920-23514202 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 96, 46

Conread position: 36-304
Cow position: chrX:27680495-27680218 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 93, 168

Conread position: 36-304
Cow position: chrX:33640072-33639788 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 87, 162

Conread position: 36-304
Cow position: chrX:45174947-45174661 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 93, 0

Conread position: 36-304
Cow position: chrX:45414207-45414483 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 96, 0

Conread position: 37-265
Cow position: chrX:27685345-27685103 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 37-278
Cow position: chrX:27228222-27227966 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 37-278
Cow position: chrX:36356202-36355958 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 102, 22

Conread position: 37-281
Cow position: chrX:32431720-32431469 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 206

Conread position: 37-293
Cow position: chrX:6407639-6407376 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 88, 22

Conread position: 37-293
Cow position: chrX:46433587-46433310 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 37-295
Cow position: chrX:21672656-21672377 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 37-295
Cow position: chrX:46032631-46032896 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 175
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 164, 105

Conread position: 37-301
Cow position: chrX:34441358-34441632 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 66, 0

Conread position: 37-302
Cow position: chrX:7351393-7351115 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 93, 27

Conread position: 37-302
Cow position: chrX:21004780-21004500 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 86, 135

Conread position: 37-303
Cow position: chrX:37489815-37489548 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 92, 151

Conread position: 37-303
Cow position: chrX:42011377-42011097 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 186
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 89, 80

Conread position: 37-304
Cow position: chrX:151997-151718 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 63

Conread position: 37-304
Cow position: chrX:1503423-1503155 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 45

Conread position: 37-304
Cow position: chrX:4632761-4633034 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 98

Conread position: 37-304
Cow position: chrX:7646347-7646077 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 87, 229

Conread position: 37-304
Cow position: chrX:10865779-10866051 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 170, 49

Conread position: 37-304
Cow position: chrX:11633778-11633495 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 97, 0

Conread position: 37-304
Cow position: chrX:12290815-12290552 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 104, 142

Conread position: 37-304
Cow position: chrX:12309290-12309572 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 92, 123

Conread position: 37-304
Cow position: chrX:15597123-15596854 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 179
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 87, 106

Conread position: 37-304
Cow position: chrX:17630705-17630986 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 37-304
Cow position: chrX:20697513-20697791 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 96, 129

Conread position: 37-304
Cow position: chrX:22822142-22821864 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 184
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 95, 121

Conread position: 37-304
Cow position: chrX:28878078-28878342 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 173
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 111, 229

Conread position: 37-304
Cow position: chrX:29289674-29289393 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 37-304
Cow position: chrX:29544781-29545063 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 95, 243

Conread position: 37-304
Cow position: chrX:32420308-32420035 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 102, 45

Conread position: 37-304
Cow position: chrX:34454753-34454486 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 166, 98

Conread position: 37-304
Cow position: chrX:34543880-34543604 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 92, 151

Conread position: 37-304
Cow position: chrX:38964204-38963923 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 94, 196

Conread position: 37-304
Cow position: chrX:41084011-41083742 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 117, 81

Conread position: 38-305
Cow position: chrX:39126421-39126152 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 161, 218

Conread position: 39-280
Cow position: chrX:39415276-39415529 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 143

Conread position: 39-304
Cow position: chrX:27516615-27516349 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 93, 40

Conread position: 40-304
Cow position: chrX:15485541-15485810 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 180
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 90

Conread position: 40-304
Cow position: chrX:20710167-20709888 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 89, 65

Conread position: 41-281
Cow position: chrX:31729534-31729284 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 168
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 91, 228

Conread position: 41-290
Cow position: chrX:30133226-30133498 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 41-302
Cow position: chrX:630217-630492 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 260

Conread position: 41-304
Cow position: chrX:2029478-2029206 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 39, 28

Conread position: 41-304
Cow position: chrX:7497335-7497060 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 73, 0

Conread position: 41-304
Cow position: chrX:11562239-11561969 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 75

Conread position: 41-304
Cow position: chrX:17042775-17042507 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 153, 73

Conread position: 41-304
Cow position: chrX:21064376-21064103 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 131

Conread position: 42-294
Cow position: chrX:35885636-35885903 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 80, 121

Conread position: 42-300
Cow position: chrX:46722643-46722920 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 42-302
Cow position: chrX:11856521-11856247 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 90, 151

Conread position: 42-304
Cow position: chrX:842248-841975 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 97, 218

Conread position: 42-304
Cow position: chrX:1175892-1176166 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 100, 10

Conread position: 42-304
Cow position: chrX:2467975-2467696 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 124

Conread position: 42-304
Cow position: chrX:21593372-21593100 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 55

Conread position: 42-304
Cow position: chrX:21642391-21642662 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 92, 80

Conread position: 42-304
Cow position: chrX:31948844-31949114 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 80, 199

Conread position: 42-304
Cow position: chrX:33000996-33000720 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 42-304
Cow position: chrX:37843808-37843537 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 90, 12

Conread position: 42-304
Cow position: chrX:40809784-40809503 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 65

Conread position: 42-304
Cow position: chrX:41878843-41879118 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 83, 37

Conread position: 42-304
Cow position: chrX:47344387-47344111 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 80, 202

Conread position: 42-304
Cow position: chrX:48248914-48248641 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 52

Conread position: 42-305
Cow position: chrX:44054893-44054617 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 94, 0

Conread position: 43-300
Cow position: chrX:3580035-3579765 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 132

Conread position: 43-302
Cow position: chrX:27514949-27514687 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 5, 87

Conread position: 43-303
Cow position: chrX:16996583-16996324 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 92

Conread position: 43-303
Cow position: chrX:23563700-23563979 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 43-304
Cow position: chrX:11844150-11844426 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 255

Conread position: 43-304
Cow position: chrX:32020043-32020305 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 63

Conread position: 43-304
Cow position: chrX:38935370-38935098 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 5, 40

Conread position: 45-303
Cow position: chrX:34238807-34238538 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 156

Conread position: 46-303
Cow position: chrX:29542130-29542401 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 83, 0

Conread position: 48-266
Cow position: chrX:29723825-29723596 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 48-292
Cow position: chrX:4399211-4398954 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 69

Conread position: 48-304
Cow position: chrX:13265542-13265803 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 100

Conread position: 48-304
Cow position: chrX:42507563-42507830 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 52-290
Cow position: chrX:10394023-10394265 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 163
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 79, 93

Conread position: 52-304
Cow position: chrX:11589507-11589772 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 73, 227

Conread position: 54-247
Cow position: chrX:19003372-19003174 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 25

Conread position: 54-293
Cow position: chrX:27771887-27772133 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 78, 29

Conread position: 54-304
Cow position: chrX:618923-619191 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 54-304
Cow position: chrX:16416588-16416323 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 62

Conread position: 54-304
Cow position: chrX:27508943-27509203 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 55-304
Cow position: chrX:24105702-24105443 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 132

Conread position: 56-289
Cow position: chrX:47145162-47144923 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 73, 90

Conread position: 59-326
Cow position: chrX:13785286-13785565 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 217

Conread position: 60-302
Cow position: chrX:28846820-28847060 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 143, 69

Conread position: 60-304
Cow position: chrX:6234376-6234632 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 34, 209

Conread position: 63-305
Cow position: chrX:26875811-26876067 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 64-304
Cow position: chrX:11313711-11313964 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 66-303
Cow position: chrX:14900666-14900904 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 16

Conread position: 67-298
Cow position: chrX:34192736-34192499 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 69, 49

Conread position: 70-304
Cow position: chrX:39938460-39938706 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 59, 0

Conread position: 72-304
Cow position: chrX:34754130-34754375 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 107

Conread position: 73-304
Cow position: chrX:41166902-41167148 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 82-305
Cow position: chrX:16789805-16790022 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 10

Conread position: 85-304
Cow position: chrX:19015485-19015259 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 73, 179

Conread position: 85-304
Cow position: chrX:36961689-36961452 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 85-304
Cow position: chrX:40452170-40452396 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 118, 50

Conread position: 85-304
Cow position: chrX:42875031-42874794 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 85-305
Cow position: chrX:15139499-15139729 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 85-305
Cow position: chrX:33466656-33466429 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 47, 185

Conread position: 87-304
Cow position: chrX:34991082-34990857 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 187

Conread position: 89-304
Cow position: chrX:4750258-4750484 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 214

Conread position: 89-304
Cow position: chrX:42086890-42086678 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 173, 40

Conread position: 92-303
Cow position: chrX:40648027-40647795 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 93-303
Cow position: chrX:41743954-41743730 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 29, 171

Conread position: 97-289
Cow position: chrX:14003610-14003813 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 97-304
Cow position: chrX:4091676-4091464 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 110, 45

Conread position: 98-302
Cow position: chrX:37048546-37048761 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 98-303
Cow position: chrX:45759421-45759215 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 23, 9

Conread position: 100-304
Cow position: chrX:17908255-17908467 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 142

Conread position: 100-304
Cow position: chrX:25238198-25237993 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 33, 51

Conread position: 100-304
Cow position: chrX:30832819-30833029 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 148

Conread position: 100-304
Cow position: chrX:38439514-38439291 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 100-305
Cow position: chrX:42994646-42994430 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 32, 195

Conread position: 101-304
Cow position: chrX:23970411-23970205 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 86

Conread position: 106-304
Cow position: chrX:20752281-20752076 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 150

Conread position: 111-304
Cow position: chrX:6640128-6639942 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 56

Conread position: 115-304
Cow position: chrX:19930661-19930472 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 21

Conread position: 123-301
Cow position: chrX:14925007-14924819 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 123-304
Cow position: chrX:20583021-20582847 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 80, 6

Conread position: 126-304
Cow position: chrX:25967036-25966857 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 138

Conread position: 129-304
Cow position: chrX:10437670-10437848 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 36

Conread position: 130-304
Cow position: chrX:678575-678751 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 76

Conread position: 131-304
Cow position: chrX:2383485-2383305 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 131-304
Cow position: chrX:10302333-10302155 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 132-303
Cow position: chrX:29509445-29509626 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 136-304
Cow position: chrX:7361871-7362034 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 137-295
Cow position: chrX:20791828-20791992 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 137-299
Cow position: chrX:24201176-24201008 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 9

Conread position: 137-301
Cow position: chrX:2186242-2186078 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 36

Conread position: 137-301
Cow position: chrX:30162987-30162816 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 137-302
Cow position: chrX:7336818-7336645 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 21

Conread position: 137-304
Cow position: chrX:281113-280947 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 21

Conread position: 137-304
Cow position: chrX:35609979-35609803 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 139-302
Cow position: chrX:8517857-8517692 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 121, 56

Conread position: 141-304
Cow position: chrX:33020470-33020302 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 143-304
Cow position: chrX:31256850-31256684 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 58, 105

Conread position: 145-265
Cow position: chrX:10366244-10366370 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 147-304
Cow position: chrX:38967628-38967467 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 90

Conread position: 155-304
Cow position: chrX:7382285-7382140 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 155-304
Cow position: chrX:9997363-9997517 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 48, 118

Conread position: 155-304
Cow position: chrX:46429888-46430041 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 16

Conread position: 207-304
Cow position: chrX:18812168-18812071 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 209-304
Cow position: chrX:21665682-21665777 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.