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Cow genome map

           
Conread name:
           
Ss1.1-Tra1-TCH01A080060.5
        

               
Conread position:
               
233-518
               

               
Cow position:
               
chr20:14472695-14472998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
14, 172
               

               
Conread position:
               
234-439
               

               
Cow position:
               
chr20:13673171-13673382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
240-508
               

               
Cow position:
               
chr20:2802334-2802609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
24, 6
               

               
Conread position:
               
249-600
               

               
Cow position:
               
chr20:21767873-21768253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 349
               

               
Conread position:
               
250-519
               

               
Cow position:
               
chr20:24660822-24660540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 6
               

               
Conread position:
               
251-473
               

               
Cow position:
               
chr20:25657026-25656804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
56, 196
               

               
Conread position:
               
251-600
               

               
Cow position:
               
chr20:36418000-36418363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
95, 59
               

               
Conread position:
               
252-481
               

               
Cow position:
               
chr20:39547162-39546925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
253-471
               

               
Cow position:
               
chr20:36182521-36182748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
256-512
               

               
Cow position:
               
chr20:5782272-5781995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
47, 8
               

               
Conread position:
               
256-512
               

               
Cow position:
               
chr20:27063488-27063211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
256-599
               

               
Cow position:
               
chr20:13501379-13501026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
51, 204
               

               
Conread position:
               
256-625
               

               
Cow position:
               
chr20:15746687-15746292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
50, 10
               

               
Conread position:
               
256-626
               

               
Cow position:
               
chr20:2782342-2782721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 8
               

               
Conread position:
               
257-513
               

               
Cow position:
               
chr20:28295047-28294776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
257-599
               

               
Cow position:
               
chr20:33731475-33731115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 200
               

               
Conread position:
               
257-626
               

               
Cow position:
               
chr20:29395727-29395358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
47, 72
               

               
Conread position:
               
258-379
               

               
Cow position:
               
chr20:14878022-14877895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-400
               

               
Cow position:
               
chr20:15539574-15539722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-403
               

               
Cow position:
               
chr20:11888262-11888413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-404
               

               
Cow position:
               
chr20:13493225-13493073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-416
               

               
Cow position:
               
chr20:5634602-5634765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 114
               

               
Conread position:
               
258-416
               

               
Cow position:
               
chr20:23871331-23871497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-416
               

               
Cow position:
               
chr20:25844579-25844741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 84
               

               
Conread position:
               
258-427
               

               
Cow position:
               
chr20:25293082-25292905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
258-429
               

               
Cow position:
               
chr20:5086706-5086529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-429
               

               
Cow position:
               
chr20:8247261-8247438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-429
               

               
Cow position:
               
chr20:24543065-24542888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-429
               

               
Cow position:
               
chr20:41975537-41975360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-432
               

               
Cow position:
               
chr20:3294272-3294450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 169
               

               
Conread position:
               
258-438
               

               
Cow position:
               
chr20:14572884-14573071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-439
               

               
Cow position:
               
chr20:10178581-10178768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
258-440
               

               
Cow position:
               
chr20:9411074-9410886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
258-440
               

               
Cow position:
               
chr20:13464993-13464807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
48, 166
               

               
Conread position:
               
258-440
               

               
Cow position:
               
chr20:15117536-15117348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
31, 154
               

               
Conread position:
               
258-440
               

               
Cow position:
               
chr20:20966584-20966396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 131
               

               
Conread position:
               
258-444
               

               
Cow position:
               
chr20:3034620-3034424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
258-462
               

               
Cow position:
               
chr20:5786104-5785894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
258-465
               

               
Cow position:
               
chr20:6477236-6477021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
35, 182
               

               
Conread position:
               
258-465
               

               
Cow position:
               
chr20:32163993-32164207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
49, 8
               

               
Conread position:
               
258-467
               

               
Cow position:
               
chr20:13711081-13711297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 132
               

               
Conread position:
               
258-502
               

               
Cow position:
               
chr20:14866662-14866920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
50, 8
               

               
Conread position:
               
258-508
               

               
Cow position:
               
chr20:27339563-27339302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
258-511
               

               
Cow position:
               
chr20:15074394-15074125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
48, 68
               

               
Conread position:
               
258-511
               

               
Cow position:
               
chr20:27978247-27978509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
258-515
               

               
Cow position:
               
chr20:25658300-25658568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
49, 210
               

               
Conread position:
               
258-517
               

               
Cow position:
               
chr20:19667300-19667026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
258-517
               

               
Cow position:
               
chr20:24620929-24620653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
258-517
               

               
Cow position:
               
chr20:39391413-39391689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-518
               

               
Cow position:
               
chr20:6550269-6550546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
258-518
               

               
Cow position:
               
chr20:7803723-7803987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
47, 132
               

               
Conread position:
               
258-518
               

               
Cow position:
               
chr20:10759996-10760272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
258-518
               

               
Cow position:
               
chr20:15240316-15240588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr20:5538873-5538595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr20:5958416-5958694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr20:19155439-19155712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr20:22209350-22209072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr20:22221880-22222153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 153
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr20:22274380-22274658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr20:24567543-24567821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr20:27877212-27876935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
48, 261
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr20:30689601-30689324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
48, 226
               

               
Conread position:
               
258-533
               

               
Cow position:
               
chr20:15089644-15089934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
48, 280
               

               
Conread position:
               
258-543
               

               
Cow position:
               
chr20:28714497-28714801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 278
               

               
Conread position:
               
258-548
               

               
Cow position:
               
chr20:13574834-13575126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 48
               

               
Conread position:
               
258-567
               

               
Cow position:
               
chr20:11516313-11516642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
48, 256
               

               
Conread position:
               
258-593
               

               
Cow position:
               
chr20:35158862-35159224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
49, 340
               

               
Conread position:
               
258-594
               

               
Cow position:
               
chr20:25330438-25330798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
48, 336
               

               
Conread position:
               
258-597
               

               
Cow position:
               
chr20:40781468-40781101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
49, 246
               

               
Conread position:
               
258-598
               

               
Cow position:
               
chr20:10686448-10686091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
47, 8
               

               
Conread position:
               
258-598
               

               
Cow position:
               
chr20:19845490-19845138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
49, 122
               

               
Conread position:
               
258-598
               

               
Cow position:
               
chr20:29284879-29285246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
49, 340
               

               
Conread position:
               
258-598
               

               
Cow position:
               
chr20:41110699-41111061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 335
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:6135262-6135630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 340
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:7081087-7081455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
49, 246
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:7597133-7597496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
48, 201
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:8870595-8870936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:10035022-10035381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 337
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:10099852-10099484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
49, 340
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:10405425-10405055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
20, 342
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:12176761-12177129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
49, 340
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:12434671-12435039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 340
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:12567598-12567955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 48
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:14326893-14327254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
47, 26
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:14836914-14836548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
44, 233
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:15235329-15234978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 149
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:16516053-16515684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
46, 341
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:16558803-16559171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
49, 342
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:17657504-17657871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
48, 111
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:19441648-19441287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 337
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:21720265-21719918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
47, 109
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:22185293-22185653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 81
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:23465925-23466288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:23802879-23802511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
48, 340
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:24399137-24399504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
48, 339
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:28113705-28113343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 336
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:28443623-28443988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
49, 337
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:28725488-28725120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 340
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:32451626-32451994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
48, 340
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:35094252-35093898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 242
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:37154237-37154605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
49, 342
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr20:37271995-37271630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 97
               

               
Conread position:
               
258-600
               

               
Cow position:
               
chr20:29314578-29314215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
48, 317
               

               
Conread position:
               
258-604
               

               
Cow position:
               
chr20:20779051-20779429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
49, 346
               

               
Conread position:
               
258-607
               

               
Cow position:
               
chr20:7994810-7995190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 159
               

               
Conread position:
               
258-607
               

               
Cow position:
               
chr20:11453872-11454250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
49, 342
               

               
Conread position:
               
258-607
               

               
Cow position:
               
chr20:13653616-13653981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
48, 228
               

               
Conread position:
               
258-607
               

               
Cow position:
               
chr20:30479838-30479462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
49, 340
               

               
Conread position:
               
258-607
               

               
Cow position:
               
chr20:31261226-31260861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
47, 150
               

               
Conread position:
               
258-611
               

               
Cow position:
               
chr20:14877787-14877409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
49, 354
               

               
Conread position:
               
258-611
               

               
Cow position:
               
chr20:17668472-17668089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
48, 132
               

               
Conread position:
               
258-617
               

               
Cow position:
               
chr20:13766611-13766233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
51, 201
               

               
Conread position:
               
258-634
               

               
Cow position:
               
chr20:40423605-40424003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 132
               

               
Conread position:
               
259-429
               

               
Cow position:
               
chr20:18091884-18092060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-429
               

               
Cow position:
               
chr20:25122509-25122685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 152
               

               
Conread position:
               
259-429
               

               
Cow position:
               
chr20:26737722-26737898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-429
               

               
Cow position:
               
chr20:29784202-29784026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-429
               

               
Cow position:
               
chr20:33304000-33304176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-429
               

               
Cow position:
               
chr20:35169772-35169596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-429
               

               
Cow position:
               
chr20:36854469-36854294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
48, 99
               

               
Conread position:
               
259-429
               

               
Cow position:
               
chr20:38956350-38956526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-431
               

               
Cow position:
               
chr20:36424209-36424033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
48, 163
               

               
Conread position:
               
259-517
               

               
Cow position:
               
chr20:28165563-28165295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
259-519
               

               
Cow position:
               
chr20:1024525-1024802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-519
               

               
Cow position:
               
chr20:17863852-17863576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
48, 273
               

               
Conread position:
               
259-519
               

               
Cow position:
               
chr20:18651337-18651060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-519
               

               
Cow position:
               
chr20:19146356-19146079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 132
               

               
Conread position:
               
259-519
               

               
Cow position:
               
chr20:28100085-28100362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
259-519
               

               
Cow position:
               
chr20:34458546-34458819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 108
               

               
Conread position:
               
259-519
               

               
Cow position:
               
chr20:40503994-40504271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-533
               

               
Cow position:
               
chr20:19313836-19314120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
259-566
               

               
Cow position:
               
chr20:30736915-30737249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-598
               

               
Cow position:
               
chr20:13619066-13619426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
87, 63
               

               
Conread position:
               
259-598
               

               
Cow position:
               
chr20:22060450-22060815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 338
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr20:754169-753802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
44, 341
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr20:775385-775019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 84
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr20:5503013-5503386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 345
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr20:8446140-8445773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
48, 341
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr20:9223580-9223213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
49, 339
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr20:13303571-13303937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
48, 148
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr20:22049094-22048727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
48, 339
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr20:26052625-26052992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 339
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr20:28324206-28323839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
48, 341
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr20:30384518-30384884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 246
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr20:31784585-31784952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
48, 341
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr20:36310775-36311142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
48, 339
               

               
Conread position:
               
260-549
               

               
Cow position:
               
chr20:2942803-2942495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
46, 283
               

               
Conread position:
               
262-519
               

               
Cow position:
               
chr20:15295742-15295469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
44, 265
               

               
Conread position:
               
262-519
               

               
Cow position:
               
chr20:35073106-35072833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
262-593
               

               
Cow position:
               
chr20:30147156-30146798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 338
               

               
Conread position:
               
262-599
               

               
Cow position:
               
chr20:4205366-4205010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
84, 330
               

               
Conread position:
               
262-599
               

               
Cow position:
               
chr20:6258570-6258933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 108
               

               
Conread position:
               
262-599
               

               
Cow position:
               
chr20:13505857-13506201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 79
               

               
Conread position:
               
262-599
               

               
Cow position:
               
chr20:31505058-31504694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 338
               

               
Conread position:
               
263-504
               

               
Cow position:
               
chr20:21925519-21925778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
17, 99
               

               
Conread position:
               
263-518
               

               
Cow position:
               
chr20:19364174-19364435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
266-427
               

               
Cow position:
               
chr20:14583195-14583362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 162
               

               
Conread position:
               
266-428
               

               
Cow position:
               
chr20:25274734-25274897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
266-429
               

               
Cow position:
               
chr20:16107225-16107053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
266-440
               

               
Cow position:
               
chr20:7227123-7227303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
266-449
               

               
Cow position:
               
chr20:18168861-18168669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
266-502
               

               
Cow position:
               
chr20:21387683-21387437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 166
               

               
Conread position:
               
266-518
               

               
Cow position:
               
chr20:16941928-16942188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 40
               

               
Conread position:
               
266-550
               

               
Cow position:
               
chr20:9536617-9536318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 236
               

               
Conread position:
               
266-598
               

               
Cow position:
               
chr20:22932967-22933312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 116
               

               
Conread position:
               
266-599
               

               
Cow position:
               
chr20:42931557-42931209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
266-600
               

               
Cow position:
               
chr20:7875169-7875520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
266-607
               

               
Cow position:
               
chr20:38001198-38000841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
40, 271
               

               
Conread position:
               
266-608
               

               
Cow position:
               
chr20:29370699-29371069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 335
               

               
Conread position:
               
267-504
               

               
Cow position:
               
chr20:19340593-19340843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
267-508
               

               
Cow position:
               
chr20:42851139-42850894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
267-518
               

               
Cow position:
               
chr20:10576559-10576804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 39
               

               
Conread position:
               
267-518
               

               
Cow position:
               
chr20:33180757-33181020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
267-550
               

               
Cow position:
               
chr20:24831560-24831855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
267-598
               

               
Cow position:
               
chr20:22006936-22006585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
39, 322
               

               
Conread position:
               
267-599
               

               
Cow position:
               
chr20:18321850-18322196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
267-599
               

               
Cow position:
               
chr20:32939009-32938654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
33, 160
               

               
Conread position:
               
267-600
               

               
Cow position:
               
chr20:3469093-3468741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
38, 149
               

               
Conread position:
               
267-600
               

               
Cow position:
               
chr20:8834020-8834363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 132
               

               
Conread position:
               
267-600
               

               
Cow position:
               
chr20:26076266-26075917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
267-619
               

               
Cow position:
               
chr20:42254336-42254704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
41, 331
               

               
Conread position:
               
267-625
               

               
Cow position:
               
chr20:27442313-27442699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
268-454
               

               
Cow position:
               
chr20:34968720-34968526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 191
               

               
Conread position:
               
268-519
               

               
Cow position:
               
chr20:1761513-1761246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
268-519
               

               
Cow position:
               
chr20:16584718-16584452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
268-533
               

               
Cow position:
               
chr20:27332234-27332514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
7, 143
               

               
Conread position:
               
268-599
               

               
Cow position:
               
chr20:8970190-8970532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
268-600
               

               
Cow position:
               
chr20:23902313-23901976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
268-600
               

               
Cow position:
               
chr20:28141453-28141100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
38, 126
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr20:14436259-14436093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
269-434
               

               
Cow position:
               
chr20:27000773-27000605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
36, 156
               

               
Conread position:
               
269-600
               

               
Cow position:
               
chr20:7225883-7225529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
38, 121
               

               
Conread position:
               
270-475
               

               
Cow position:
               
chr20:21371563-21371343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
270-519
               

               
Cow position:
               
chr20:2178649-2178915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
273-626
               

               
Cow position:
               
chr20:28103115-28102740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
33, 131
               

               
Conread position:
               
274-475
               

               
Cow position:
               
chr20:35972910-35973118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 154
               

               
Conread position:
               
276-602
               

               
Cow position:
               
chr20:31564507-31564853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 320
               

               
Conread position:
               
279-518
               

               
Cow position:
               
chr20:12421170-12421423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
280-424
               

               
Cow position:
               
chr20:39447270-39447119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
284-600
               

               
Cow position:
               
chr20:23107107-23106766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 244
               

               
Conread position:
               
302-588
               

               
Cow position:
               
chr20:8094043-8094343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 8
               

               
Conread position:
               
304-477
               

               
Cow position:
               
chr20:6908547-6908727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 81
               

               
Conread position:
               
304-508
               

               
Cow position:
               
chr20:3652307-3652525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
304-519
               

               
Cow position:
               
chr20:23067222-23067443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
304-611
               

               
Cow position:
               
chr20:13660673-13660996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 202
               

               
Conread position:
               
306-480
               

               
Cow position:
               
chr20:14673208-14673027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
306-518
               

               
Cow position:
               
chr20:24439847-24439621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 176
               

               
Conread position:
               
306-519
               

               
Cow position:
               
chr20:24445667-24445887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
306-563
               

               
Cow position:
               
chr20:20386048-20386308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
122, 40
               

               
Conread position:
               
306-599
               

               
Cow position:
               
chr20:10516572-10516258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 89
               

               
Conread position:
               
310-519
               

               
Cow position:
               
chr20:14210705-14210927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
311-440
               

               
Cow position:
               
chr20:27606327-27606196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
311-518
               

               
Cow position:
               
chr20:28822551-28822768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 52
               

               
Conread position:
               
311-519
               

               
Cow position:
               
chr20:21837679-21837458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
311-519
               

               
Cow position:
               
chr20:28282736-28282528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
35, 125
               

               
Conread position:
               
311-536
               

               
Cow position:
               
chr20:32084774-32085005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
34, 215
               

               
Conread position:
               
311-599
               

               
Cow position:
               
chr20:6097009-6097304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
35, 237
               

               
Conread position:
               
311-599
               

               
Cow position:
               
chr20:14512362-14512057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
35, 277
               

               
Conread position:
               
311-599
               

               
Cow position:
               
chr20:26275271-26275572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 90
               

               
Conread position:
               
311-605
               

               
Cow position:
               
chr20:5120150-5120436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
33, 111
               

               
Conread position:
               
314-519
               

               
Cow position:
               
chr20:4725870-4725653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
315-599
               

               
Cow position:
               
chr20:14924975-14925281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 280
               

               
Conread position:
               
331-593
               

               
Cow position:
               
chr20:12837283-12837555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
15, 235
               

               
Conread position:
               
331-610
               

               
Cow position:
               
chr20:2016169-2016462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
15, 123
               

               
Conread position:
               
334-519
               

               
Cow position:
               
chr20:24836724-24836921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
342-599
               

               
Cow position:
               
chr20:35843810-35844068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
8, 25
               
Show alignments to all cow chromosomes.