• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Tra1-TCH01A080060.5
        

               
Conread position:
               
233-610
               

               
Cow position:
               
chr23:10905562-10905157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 16
               

               
Conread position:
               
234-472
               

               
Cow position:
               
chr23:9712130-9712373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 222
               

               
Conread position:
               
235-519
               

               
Cow position:
               
chr23:38969823-38969529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
235-600
               

               
Cow position:
               
chr23:35280857-35281230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
250-599
               

               
Cow position:
               
chr23:11070746-11070368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
252-441
               

               
Cow position:
               
chr23:16019983-16020174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 80
               

               
Conread position:
               
253-598
               

               
Cow position:
               
chr23:20216610-20216250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
254-599
               

               
Cow position:
               
chr23:37198847-37199219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
5, 111
               

               
Conread position:
               
255-519
               

               
Cow position:
               
chr23:26941431-26941147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
256-473
               

               
Cow position:
               
chr23:6070766-6070995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 8
               

               
Conread position:
               
256-517
               

               
Cow position:
               
chr23:6444293-6444018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
256-518
               

               
Cow position:
               
chr23:2033052-2032773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
50, 8
               

               
Conread position:
               
256-600
               

               
Cow position:
               
chr23:11405026-11405394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
49, 77
               

               
Conread position:
               
256-603
               

               
Cow position:
               
chr23:7129496-7129867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
256-610
               

               
Cow position:
               
chr23:6698500-6698132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
50, 287
               

               
Conread position:
               
257-513
               

               
Cow position:
               
chr23:3167699-3167438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
257-519
               

               
Cow position:
               
chr23:9215490-9215217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 124
               

               
Conread position:
               
257-519
               

               
Cow position:
               
chr23:36184344-36184613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
258-405
               

               
Cow position:
               
chr23:23949442-23949290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 141
               

               
Conread position:
               
258-414
               

               
Cow position:
               
chr23:21772249-21772396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
258-415
               

               
Cow position:
               
chr23:11459583-11459746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-427
               

               
Cow position:
               
chr23:28118626-28118801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
258-429
               

               
Cow position:
               
chr23:7174180-7174006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
258-429
               

               
Cow position:
               
chr23:11712036-11712213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-429
               

               
Cow position:
               
chr23:19316552-19316729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-434
               

               
Cow position:
               
chr23:977390-977572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-438
               

               
Cow position:
               
chr23:7374328-7374155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
88, 22
               

               
Conread position:
               
258-439
               

               
Cow position:
               
chr23:36485373-36485559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 166
               

               
Conread position:
               
258-440
               

               
Cow position:
               
chr23:770812-770993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
87, 123
               

               
Conread position:
               
258-440
               

               
Cow position:
               
chr23:19967073-19966889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
48, 129
               

               
Conread position:
               
258-440
               

               
Cow position:
               
chr23:25676214-25676400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 111
               

               
Conread position:
               
258-454
               

               
Cow position:
               
chr23:5623921-5624124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 133
               

               
Conread position:
               
258-497
               

               
Cow position:
               
chr23:3488534-3488785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
48, 111
               

               
Conread position:
               
258-504
               

               
Cow position:
               
chr23:34347554-34347304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 166
               

               
Conread position:
               
258-513
               

               
Cow position:
               
chr23:361983-362255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-517
               

               
Cow position:
               
chr23:15038675-15038942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
48, 129
               

               
Conread position:
               
258-517
               

               
Cow position:
               
chr23:17846648-17846374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 142
               

               
Conread position:
               
258-517
               

               
Cow position:
               
chr23:32007753-32008010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
49, 70
               

               
Conread position:
               
258-518
               

               
Cow position:
               
chr23:1545399-1545131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
48, 154
               

               
Conread position:
               
258-518
               

               
Cow position:
               
chr23:24098785-24098510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
258-518
               

               
Cow position:
               
chr23:38584573-38584300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 209
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr23:2723405-2723127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr23:8291109-8290835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
53, 36
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr23:12978397-12978135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 53
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr23:14215575-14215853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr23:14265999-14265724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
49, 153
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr23:24120214-24119936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr23:30633932-30634213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr23:31584961-31584683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr23:35284861-35285139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr23:38934575-38934853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr23:40710580-40710302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-533
               

               
Cow position:
               
chr23:25665164-25665439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
258-550
               

               
Cow position:
               
chr23:5882963-5882655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
87, 279
               

               
Conread position:
               
258-593
               

               
Cow position:
               
chr23:4517185-4516830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
48, 99
               

               
Conread position:
               
258-597
               

               
Cow position:
               
chr23:15529244-15528880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 110
               

               
Conread position:
               
258-597
               

               
Cow position:
               
chr23:35937471-35937114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
45, 66
               

               
Conread position:
               
258-598
               

               
Cow position:
               
chr23:28915987-28915620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr23:610360-609998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
49, 149
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr23:1337831-1338204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 127
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr23:2320291-2320656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
49, 259
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr23:2472642-2473011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
48, 341
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr23:3549536-3549903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
49, 233
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr23:4581685-4581317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 340
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr23:4892356-4891987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
48, 341
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr23:8708050-8707682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
49, 342
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr23:11344152-11343788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
48, 336
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr23:11376659-11377026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
48, 100
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr23:11782445-11782077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr23:20152561-20152929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 340
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr23:28222360-28221992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 129
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr23:29043443-29043074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 340
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr23:29459622-29459962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
87, 52
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr23:36027593-36027961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
48, 340
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr23:40773987-40773619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 340
               

               
Conread position:
               
258-599
               

               
Cow position:
               
chr23:40890433-40890067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
258-600
               

               
Cow position:
               
chr23:6223476-6223112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
49, 238
               

               
Conread position:
               
258-607
               

               
Cow position:
               
chr23:4636692-4637072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 344
               

               
Conread position:
               
258-607
               

               
Cow position:
               
chr23:12864347-12863984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 324
               

               
Conread position:
               
258-607
               

               
Cow position:
               
chr23:22143651-22144027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
48, 340
               

               
Conread position:
               
258-610
               

               
Cow position:
               
chr23:25565646-25565270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
258-622
               

               
Cow position:
               
chr23:344810-345201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
49, 324
               

               
Conread position:
               
258-626
               

               
Cow position:
               
chr23:37152200-37152604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 7
               

               
Conread position:
               
258-829
               

               
Cow position:
               
chr23:4487309-4487897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
259-391
               

               
Cow position:
               
chr23:3827432-3827570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-414
               

               
Cow position:
               
chr23:21009344-21009184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 152
               

               
Conread position:
               
259-414
               

               
Cow position:
               
chr23:26932645-26932806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 153
               

               
Conread position:
               
259-429
               

               
Cow position:
               
chr23:4100536-4100360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-429
               

               
Cow position:
               
chr23:10874004-10874180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-517
               

               
Cow position:
               
chr23:12003718-12003463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
48, 143
               

               
Conread position:
               
259-517
               

               
Cow position:
               
chr23:29699653-29699926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 132
               

               
Conread position:
               
259-518
               

               
Cow position:
               
chr23:28084813-28084537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-519
               

               
Cow position:
               
chr23:573609-573883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
48, 101
               

               
Conread position:
               
259-519
               

               
Cow position:
               
chr23:3286415-3286140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
259-519
               

               
Cow position:
               
chr23:3302513-3302236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
259-519
               

               
Cow position:
               
chr23:14910773-14911050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
259-519
               

               
Cow position:
               
chr23:15569220-15568943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-519
               

               
Cow position:
               
chr23:39784415-39784138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-520
               

               
Cow position:
               
chr23:4544659-4544937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-591
               

               
Cow position:
               
chr23:11080043-11079684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 341
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr23:671828-671463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
48, 105
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr23:954142-954509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 339
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr23:1113610-1113243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
48, 336
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr23:4267094-4266727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 339
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr23:5441575-5441208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
48, 341
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr23:5458397-5458030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
48, 341
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr23:5870750-5871105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
48, 244
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr23:9267204-9267571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 341
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr23:25352018-25351651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
48, 339
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr23:31606086-31605719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
48, 341
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr23:39745518-39745155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
48, 339
               

               
Conread position:
               
259-599
               

               
Cow position:
               
chr23:41015587-41015220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
48, 339
               

               
Conread position:
               
259-606
               

               
Cow position:
               
chr23:2528738-2529112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 339
               

               
Conread position:
               
259-607
               

               
Cow position:
               
chr23:19056703-19057069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
48, 200
               

               
Conread position:
               
259-613
               

               
Cow position:
               
chr23:10936639-10937019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 141
               

               
Conread position:
               
260-518
               

               
Cow position:
               
chr23:6441426-6441679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
155, 46
               

               
Conread position:
               
262-519
               

               
Cow position:
               
chr23:1959782-1959508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
262-598
               

               
Cow position:
               
chr23:10424555-10424223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
262-599
               

               
Cow position:
               
chr23:19493508-19493140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 340
               

               
Conread position:
               
262-599
               

               
Cow position:
               
chr23:30622845-30623209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 336
               

               
Conread position:
               
262-609
               

               
Cow position:
               
chr23:29446300-29446671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
83, 94
               

               
Conread position:
               
265-481
               

               
Cow position:
               
chr23:10960606-10960379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
265-519
               

               
Cow position:
               
chr23:10164698-10164964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
266-496
               

               
Cow position:
               
chr23:24469709-24469473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
40, 91
               

               
Conread position:
               
266-513
               

               
Cow position:
               
chr23:25554242-25553979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
40, 86
               

               
Conread position:
               
266-519
               

               
Cow position:
               
chr23:12081304-12081051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
40, 119
               

               
Conread position:
               
266-598
               

               
Cow position:
               
chr23:22170558-22170200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 331
               

               
Conread position:
               
266-598
               

               
Cow position:
               
chr23:26230776-26230422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 197
               

               
Conread position:
               
266-598
               

               
Cow position:
               
chr23:35275872-35275524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
40, 307
               

               
Conread position:
               
266-599
               

               
Cow position:
               
chr23:1310924-1311279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 130
               

               
Conread position:
               
266-599
               

               
Cow position:
               
chr23:2408563-2408921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 243
               

               
Conread position:
               
266-599
               

               
Cow position:
               
chr23:20025585-20025225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 196
               

               
Conread position:
               
267-432
               

               
Cow position:
               
chr23:10495651-10495817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 120
               

               
Conread position:
               
267-440
               

               
Cow position:
               
chr23:2370846-2370670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
267-440
               

               
Cow position:
               
chr23:6720835-6721012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
267-467
               

               
Cow position:
               
chr23:7372754-7372542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
267-518
               

               
Cow position:
               
chr23:16368595-16368332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
267-519
               

               
Cow position:
               
chr23:25030530-25030782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
267-536
               

               
Cow position:
               
chr23:30165716-30165984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
267-600
               

               
Cow position:
               
chr23:1535766-1535413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
41, 144
               

               
Conread position:
               
267-600
               

               
Cow position:
               
chr23:2531880-2532223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
267-600
               

               
Cow position:
               
chr23:16057340-16056989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
39, 150
               

               
Conread position:
               
267-600
               

               
Cow position:
               
chr23:35324592-35324937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
125, 33
               

               
Conread position:
               
267-600
               

               
Cow position:
               
chr23:41538284-41537953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
267-607
               

               
Cow position:
               
chr23:29471661-29472026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 235
               

               
Conread position:
               
268-440
               

               
Cow position:
               
chr23:16495627-16495805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
268-517
               

               
Cow position:
               
chr23:20862104-20861846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
34, 129
               

               
Conread position:
               
268-519
               

               
Cow position:
               
chr23:2023439-2023703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
268-519
               

               
Cow position:
               
chr23:28306494-28306226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
268-519
               

               
Cow position:
               
chr23:39812670-39812406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
268-522
               

               
Cow position:
               
chr23:41476285-41476556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
39, 269
               

               
Conread position:
               
268-566
               

               
Cow position:
               
chr23:10955921-10955593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
38, 248
               

               
Conread position:
               
268-599
               

               
Cow position:
               
chr23:27402784-27402425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
38, 331
               

               
Conread position:
               
268-600
               

               
Cow position:
               
chr23:36688376-36688719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
78, 103
               

               
Conread position:
               
269-519
               

               
Cow position:
               
chr23:19948373-19948632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 217
               

               
Conread position:
               
269-519
               

               
Cow position:
               
chr23:26828893-26828630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
37, 120
               

               
Conread position:
               
269-625
               

               
Cow position:
               
chr23:7249478-7249849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
37, 302
               

               
Conread position:
               
270-599
               

               
Cow position:
               
chr23:2369437-2369107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 188
               

               
Conread position:
               
276-626
               

               
Cow position:
               
chr23:21666850-21666483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
278-474
               

               
Cow position:
               
chr23:24822378-24822579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 68
               

               
Conread position:
               
278-599
               

               
Cow position:
               
chr23:15020555-15020208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
29, 90
               

               
Conread position:
               
281-625
               

               
Cow position:
               
chr23:30732727-30732382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
293-599
               

               
Cow position:
               
chr23:5416356-5416038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 22
               

               
Conread position:
               
297-616
               

               
Cow position:
               
chr23:14839581-14839915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
133, 43
               

               
Conread position:
               
302-519
               

               
Cow position:
               
chr23:34271568-34271351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
46, 56
               

               
Conread position:
               
303-519
               

               
Cow position:
               
chr23:17187398-17187175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
304-517
               

               
Cow position:
               
chr23:34078359-34078580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
304-605
               

               
Cow position:
               
chr23:11814254-11814560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
41, 225
               

               
Conread position:
               
306-454
               

               
Cow position:
               
chr23:10912920-10912770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
306-607
               

               
Cow position:
               
chr23:8388538-8388851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
306-620
               

               
Cow position:
               
chr23:31613518-31613200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
310-624
               

               
Cow position:
               
chr23:11967868-11967549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
311-514
               

               
Cow position:
               
chr23:615817-616029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
311-518
               

               
Cow position:
               
chr23:2761499-2761280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
311-518
               

               
Cow position:
               
chr23:3451603-3451821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
311-599
               

               
Cow position:
               
chr23:5339956-5340242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
311-599
               

               
Cow position:
               
chr23:6173425-6173728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
311-599
               

               
Cow position:
               
chr23:8323354-8323055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
34, 268
               

               
Conread position:
               
311-599
               

               
Cow position:
               
chr23:10679232-10679542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 282
               

               
Conread position:
               
312-611
               

               
Cow position:
               
chr23:17000036-16999717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
36, 277
               

               
Conread position:
               
312-611
               

               
Cow position:
               
chr23:17404207-17403893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
313-541
               

               
Cow position:
               
chr23:26066506-26066274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
313-607
               

               
Cow position:
               
chr23:30837973-30838274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 226
               

               
Conread position:
               
313-626
               

               
Cow position:
               
chr23:15351788-15351453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
314-513
               

               
Cow position:
               
chr23:6688457-6688663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
320-535
               

               
Cow position:
               
chr23:5539546-5539769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
111, 24
               

               
Conread position:
               
323-624
               

               
Cow position:
               
chr23:6964736-6964423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 6
               

               
Conread position:
               
327-519
               

               
Cow position:
               
chr23:29143643-29143446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
331-525
               

               
Cow position:
               
chr23:16972785-16972589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
331-599
               

               
Cow position:
               
chr23:14959379-14959662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
336-517
               

               
Cow position:
               
chr23:25594534-25594343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
336-624
               

               
Cow position:
               
chr23:29487671-29487372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
346-630
               

               
Cow position:
               
chr23:30186669-30186962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
82, 20
               

               
Conread position:
               
355-626
               

               
Cow position:
               
chr23:36675600-36675899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
419-626
               

               
Cow position:
               
chr23:11978589-11978380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 31
               
Show alignments to all cow chromosomes.