Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01A080060.5 |
| Conread position: | 220-608 |
| Cow position: | chr27:4979282-4978887 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 49, 285 |
| Conread position: | 225-596 |
| Cow position: | chr27:3751903-3751516 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 119 |
| Conread position: | 232-602 |
| Cow position: | chr27:22330180-22329789 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 25, 275 |
| Conread position: | 251-477 |
| Cow position: | chr27:23481539-23481771 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 10, 26 |
| Conread position: | 251-600 |
| Cow position: | chr27:12282352-12281981 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 261 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 17, 140 |
| Conread position: | 255-600 |
| Cow position: | chr27:16428318-16427951 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 50, 142 |
| Conread position: | 255-600 |
| Cow position: | chr27:17864639-17864281 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 256-428 |
| Cow position: | chr27:15508917-15508737 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 15, 8 |
| Conread position: | 256-515 |
| Cow position: | chr27:10321719-10321450 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 71, 8 |
| Conread position: | 256-519 |
| Cow position: | chr27:7418372-7418094 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 50, 76 |
| Conread position: | 256-519 |
| Cow position: | chr27:13182625-13182903 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 256-564 |
| Cow position: | chr27:28235715-28236029 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 15, 154 |
| Conread position: | 256-600 |
| Cow position: | chr27:27234490-27234846 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 18 |
| Conread position: | 257-437 |
| Cow position: | chr27:21986404-21986588 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 93 |
| Conread position: | 257-440 |
| Cow position: | chr27:29046238-29046048 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 257-512 |
| Cow position: | chr27:4664985-4665254 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 50, 247 |
| Conread position: | 257-599 |
| Cow position: | chr27:11256027-11256394 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 50, 6 |
| Conread position: | 258-403 |
| Cow position: | chr27:5836481-5836330 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 258-427 |
| Cow position: | chr27:4768980-4768806 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 49, 153 |
| Conread position: | 258-428 |
| Cow position: | chr27:11470193-11470017 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 15, 159 |
| Conread position: | 258-428 |
| Cow position: | chr27:23893994-23893818 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 258-429 |
| Cow position: | chr27:523681-523503 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 258-429 |
| Cow position: | chr27:724204-724027 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 258-429 |
| Cow position: | chr27:1481553-1481376 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 258-429 |
| Cow position: | chr27:11651756-11651579 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 258-429 |
| Cow position: | chr27:12147552-12147375 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 258-438 |
| Cow position: | chr27:8942184-8941997 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 258-440 |
| Cow position: | chr27:5914597-5914408 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 258-440 |
| Cow position: | chr27:25112826-25112636 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 258-440 |
| Cow position: | chr27:27527696-27527509 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 132 |
| Conread position: | 258-455 |
| Cow position: | chr27:17923568-17923362 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 48, 169 |
| Conread position: | 258-457 |
| Cow position: | chr27:19388530-19388737 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 258-459 |
| Cow position: | chr27:1293907-1293698 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 50, 201 |
| Conread position: | 258-462 |
| Cow position: | chr27:20828192-20827981 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 258-475 |
| Cow position: | chr27:16550972-16551204 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 258-497 |
| Cow position: | chr27:26545415-26545163 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 48, 242 |
| Conread position: | 258-506 |
| Cow position: | chr27:14381094-14380837 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 258-508 |
| Cow position: | chr27:12190934-12190667 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 258-517 |
| Cow position: | chr27:3235391-3235112 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 258-517 |
| Cow position: | chr27:24066030-24065761 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 31, 6 |
| Conread position: | 258-517 |
| Cow position: | chr27:26644594-26644860 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 9, 246 |
| Conread position: | 258-519 |
| Cow position: | chr27:1030894-1031172 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 258-519 |
| Cow position: | chr27:1502153-1501895 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 49, 132 |
| Conread position: | 258-519 |
| Cow position: | chr27:2557334-2557611 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 197 |
| Conread position: | 258-519 |
| Cow position: | chr27:8201596-8201317 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 258-519 |
| Cow position: | chr27:9333327-9333049 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 258-519 |
| Cow position: | chr27:13273212-13272949 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 102 |
| Conread position: | 258-519 |
| Cow position: | chr27:13422504-13422782 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 258-519 |
| Cow position: | chr27:17476563-17476825 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 81 |
| Conread position: | 258-519 |
| Cow position: | chr27:19931898-19932174 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 258-519 |
| Cow position: | chr27:20811076-20810798 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 258-519 |
| Cow position: | chr27:24055343-24055071 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 49, 116 |
| Conread position: | 258-519 |
| Cow position: | chr27:26856700-26856422 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 258-519 |
| Cow position: | chr27:29811961-29811686 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 132 |
| Conread position: | 258-520 |
| Cow position: | chr27:15871672-15871947 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 239 |
| Conread position: | 258-533 |
| Cow position: | chr27:11490280-11489991 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 49, 132 |
| Conread position: | 258-536 |
| Cow position: | chr27:12173597-12173307 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 248 |
| Conread position: | 258-560 |
| Cow position: | chr27:28907575-28907898 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 117 |
| Conread position: | 258-593 |
| Cow position: | chr27:25784104-25784461 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 51, 292 |
| Conread position: | 258-594 |
| Cow position: | chr27:13901783-13901421 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 258-598 |
| Cow position: | chr27:15349295-15348949 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 108 |
| Conread position: | 258-599 |
| Cow position: | chr27:165261-165627 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 49, 247 |
| Conread position: | 258-599 |
| Cow position: | chr27:344271-344638 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 15 |
| Conread position: | 258-599 |
| Cow position: | chr27:791386-791754 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 49, 340 |
| Conread position: | 258-599 |
| Cow position: | chr27:2332160-2331795 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 48, 111 |
| Conread position: | 258-599 |
| Cow position: | chr27:3231878-3232242 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 48, 213 |
| Conread position: | 258-599 |
| Cow position: | chr27:3653040-3653408 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 49, 340 |
| Conread position: | 258-599 |
| Cow position: | chr27:11481591-11481223 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 48, 340 |
| Conread position: | 258-599 |
| Cow position: | chr27:12006808-12006440 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 49, 340 |
| Conread position: | 258-599 |
| Cow position: | chr27:14297865-14297499 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 110 |
| Conread position: | 258-599 |
| Cow position: | chr27:15100299-15099934 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 49, 152 |
| Conread position: | 258-599 |
| Cow position: | chr27:15272417-15272778 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 251 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 48, 341 |
| Conread position: | 258-599 |
| Cow position: | chr27:21452104-21451735 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 35 |
| Conread position: | 258-599 |
| Cow position: | chr27:26330587-26330224 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 87, 335 |
| Conread position: | 258-599 |
| Cow position: | chr27:27292053-27291685 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 340 |
| Conread position: | 258-602 |
| Cow position: | chr27:18559274-18559645 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 103 |
| Conread position: | 258-607 |
| Cow position: | chr27:11434822-11434459 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 132 |
| Conread position: | 258-621 |
| Cow position: | chr27:17565004-17565365 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 138, 47 |
| Conread position: | 258-626 |
| Cow position: | chr27:9262618-9263013 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 48, 345 |
| Conread position: | 259-392 |
| Cow position: | chr27:12006022-12006161 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 259-416 |
| Cow position: | chr27:22013881-22013719 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 259-417 |
| Cow position: | chr27:11606227-11606390 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 48, 152 |
| Conread position: | 259-423 |
| Cow position: | chr27:3340267-3340437 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 259-424 |
| Cow position: | chr27:15312710-15312881 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 259-428 |
| Cow position: | chr27:15178725-15178900 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 259-429 |
| Cow position: | chr27:11095150-11095326 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 259-429 |
| Cow position: | chr27:29374247-29374423 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 259-429 |
| Cow position: | chr27:29446446-29446622 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 259-449 |
| Cow position: | chr27:12549621-12549820 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 259-454 |
| Cow position: | chr27:13198412-13198610 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 189 |
| Conread position: | 259-519 |
| Cow position: | chr27:8187491-8187218 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 259-519 |
| Cow position: | chr27:19487325-19487603 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 47, 152 |
| Conread position: | 259-519 |
| Cow position: | chr27:20001157-20001434 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 259-519 |
| Cow position: | chr27:24295601-24295878 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 259-598 |
| Cow position: | chr27:31546891-31547246 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 47, 166 |
| Conread position: | 259-599 |
| Cow position: | chr27:2001503-2001137 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 48, 114 |
| Conread position: | 259-599 |
| Cow position: | chr27:3650140-3649773 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 48, 152 |
| Conread position: | 259-599 |
| Cow position: | chr27:8959358-8959724 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 48, 340 |
| Conread position: | 259-599 |
| Cow position: | chr27:10579602-10579239 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 335 |
| Conread position: | 259-599 |
| Cow position: | chr27:16030739-16031105 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 31, 338 |
| Conread position: | 259-599 |
| Cow position: | chr27:19299907-19300274 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 248 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 48, 339 |
| Conread position: | 259-599 |
| Cow position: | chr27:22797000-22797367 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 48, 339 |
| Conread position: | 259-599 |
| Cow position: | chr27:29035723-29036090 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 48, 341 |
| Conread position: | 259-599 |
| Cow position: | chr27:30306607-30306977 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 47, 169 |
| Conread position: | 259-617 |
| Cow position: | chr27:16331830-16332205 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 47, 329 |
| Conread position: | 260-400 |
| Cow position: | chr27:30446739-30446885 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 260-600 |
| Cow position: | chr27:9254486-9254853 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 119 |
| Conread position: | 262-519 |
| Cow position: | chr27:8202344-8202618 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 262-532 |
| Cow position: | chr27:30176857-30177145 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 265-473 |
| Cow position: | chr27:1636432-1636222 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 160 |
| Conread position: | 265-517 |
| Cow position: | chr27:15363922-15363662 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 12 |
| Conread position: | 266-440 |
| Cow position: | chr27:7748658-7748480 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 266-440 |
| Cow position: | chr27:18970379-18970203 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 24, 11 |
| Conread position: | 266-600 |
| Cow position: | chr27:1141347-1140988 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 305 |
| Conread position: | 267-403 |
| Cow position: | chr27:27683514-27683372 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 267-440 |
| Cow position: | chr27:16076058-16076236 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 267-477 |
| Cow position: | chr27:25472084-25472305 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 267-489 |
| Cow position: | chr27:11090688-11090451 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 267-518 |
| Cow position: | chr27:30476597-30476865 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 35, 147 |
| Conread position: | 267-518 |
| Cow position: | chr27:30697199-30696939 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 64 |
| Conread position: | 267-519 |
| Cow position: | chr27:1081526-1081781 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 40, 55 |
| Conread position: | 267-600 |
| Cow position: | chr27:23793988-23794341 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 9, 87 |
| Conread position: | 267-626 |
| Cow position: | chr27:27501837-27501458 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 40, 147 |
| Conread position: | 267-630 |
| Cow position: | chr27:5268997-5268607 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 39, 123 |
| Conread position: | 268-429 |
| Cow position: | chr27:6074648-6074816 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 268-504 |
| Cow position: | chr27:28924529-28924283 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 268-513 |
| Cow position: | chr27:17423262-17423000 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 268-513 |
| Cow position: | chr27:27186948-27186704 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 35, 122 |
| Conread position: | 268-519 |
| Cow position: | chr27:12751180-12750918 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 268-599 |
| Cow position: | chr27:526561-526227 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 38, 208 |
| Conread position: | 268-599 |
| Cow position: | chr27:30677439-30677789 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 35, 324 |
| Conread position: | 269-488 |
| Cow position: | chr27:11954742-11954508 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 269-519 |
| Cow position: | chr27:23454622-23454361 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 94 |
| Conread position: | 269-610 |
| Cow position: | chr27:25676778-25677132 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 37, 105 |
| Conread position: | 270-519 |
| Cow position: | chr27:19523062-19523327 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 271-439 |
| Cow position: | chr27:30777073-30777246 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 278-519 |
| Cow position: | chr27:3704217-3703959 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 250 |
| Conread position: | 281-598 |
| Cow position: | chr27:15866664-15867009 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 154 |
| Conread position: | 282-519 |
| Cow position: | chr27:11349498-11349753 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 80 |
| Conread position: | 282-550 |
| Cow position: | chr27:11630273-11630545 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 52 |
| Conread position: | 304-428 |
| Cow position: | chr27:16110763-16110638 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 304-429 |
| Cow position: | chr27:5106790-5106664 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 304-429 |
| Cow position: | chr27:8291458-8291332 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 304-440 |
| Cow position: | chr27:8429860-8429726 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 51 |
| Conread position: | 304-599 |
| Cow position: | chr27:1521283-1520972 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 42, 286 |
| Conread position: | 304-671 |
| Cow position: | chr27:16581570-16581938 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 41, 50 |
| Conread position: | 305-520 |
| Cow position: | chr27:1904007-1904227 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 310-599 |
| Cow position: | chr27:27557401-27557094 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 36, 112 |
| Conread position: | 310-625 |
| Cow position: | chr27:23200277-23200606 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 61 |
| Conread position: | 311-518 |
| Cow position: | chr27:22038227-22038019 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 74 |
| Conread position: | 311-519 |
| Cow position: | chr27:4982962-4982754 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 35, 92 |
| Conread position: | 311-519 |
| Cow position: | chr27:25492769-25492982 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 311-533 |
| Cow position: | chr27:15406221-15405990 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 311-593 |
| Cow position: | chr27:17049848-17050149 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 311-599 |
| Cow position: | chr27:15633745-15634050 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 119, 20 |
| Conread position: | 312-599 |
| Cow position: | chr27:8973044-8972736 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 74 |
| Conread position: | 331-517 |
| Cow position: | chr27:11413974-11414164 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 64 |
| Conread position: | 344-597 |
| Cow position: | chr27:14859891-14859621 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 80, 152 |
Show alignments to all cow chromosomes.