Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01B020046.5 |
| Conread position: | 11-267 |
| Cow position: | chr3:64892290-64892547 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 11-285 |
| Cow position: | chr3:64855840-64856116 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 92-265 |
| Cow position: | chr3:64829297-64829466 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 267-431 |
| Cow position: | chr3:64896971-64897135 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 138 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 267-458 |
| Cow position: | chr3:57471374-57471564 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 188, 166 |
| Conread position: | 269-431 |
| Cow position: | chr3:64834145-64834307 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 55, 112 |
| Conread position: | 269-431 |
| Cow position: | chr3:64865556-64865718 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 430-581 |
| Cow position: | chr3:64899299-64899450 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 138 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 430-587 |
| Cow position: | chr3:64868295-64868452 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 143 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 116 |
| Conread position: | 430-592 |
| Cow position: | chr3:57474042-57474204 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 142 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 430-592 |
| Cow position: | chr3:64837142-64837304 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 142 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 430-592 |
| Cow position: | chr3:64981471-64981633 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 139 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 580-724 |
| Cow position: | chr3:64899841-64899987 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 131 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 580-732 |
| Cow position: | chr3:57474579-57474731 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 580-732 |
| Cow position: | chr3:64868700-64868852 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 133 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 580-732 |
| Cow position: | chr3:64981992-64982144 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 132 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 582-737 |
| Cow position: | chr3:64837677-64837826 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 739-918 |
| Cow position: | chr3:64870272-64870451 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 155 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 739-918 |
| Cow position: | chr3:64901753-64901932 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 739-924 |
| Cow position: | chr3:64842239-64842416 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 152 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 739-925 |
| Cow position: | chr3:57476956-57477142 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 739-925 |
| Cow position: | chr3:64984998-64985184 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 741-899 |
| Cow position: | chr3:64901216-64901374 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 135 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 917-1043 |
| Cow position: | chr3:57439278-57439404 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 917-1043 |
| Cow position: | chr3:57491150-57491276 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 917-1044 |
| Cow position: | chr3:64873020-64873147 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 917-1044 |
| Cow position: | chr3:64903591-64903718 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.