Cow genome map


           Conread name:
           Ss1.1-Tra1-TCH01B080057.5
        

               Conread position:
               1-158
               

               Cow position:
               chr10:33965332-33965174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               52, 91
               

               Conread position:
               2-129
               

               Cow position:
               chr10:16628648-16628520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               120, 65
               

               Conread position:
               11-116
               

               Cow position:
               chr10:12158796-12158690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               11-123
               

               Cow position:
               chr10:7935862-7935975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 94
               

               Conread position:
               439-609
               

               Cow position:
               chr10:51210914-51211084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               128, 72
               

               Conread position:
               446-605
               

               Cow position:
               chr10:15747041-15746883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               121, 30
               

               Conread position:
               446-624
               

               Cow position:
               chr10:59544748-59544925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               114, 19
               

               Conread position:
               447-610
               

               Cow position:
               chr10:47965938-47965779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               34, 0
               
Show alignments to all cow chromosomes.