Cow genome map


           Conread name:
           Ss1.1-Tra1-TCH01B110009.5
        

               Conread position:
               1197-1359
               

               Cow position:
               chr1:45315668-45315507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1207-1360
               

               Cow position:
               chr1:87197797-87197950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1212-1360
               

               Cow position:
               chr1:57575782-57575635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               1214-1363
               

               Cow position:
               chr1:81481398-81481249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1215-1353
               

               Cow position:
               chr1:41027060-41027197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1215-1360
               

               Cow position:
               chr1:81290492-81290637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               142, 64
               
Show alignments to all cow chromosomes.