Cow genome map


           Conread name:
           Ss1.1-Tra1-TCH01B110009.5
        

               Conread position:
               1195-1360
               

               Cow position:
               chr11:897613-897781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1212-1363
               

               Cow position:
               chr11:27248452-27248600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1214-1354
               

               Cow position:
               chr11:16342268-16342128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1214-1360
               

               Cow position:
               chr11:36329074-36328931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               1214-1363
               

               Cow position:
               chr11:35580220-35580373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1214-1435
               

               Cow position:
               chr11:52380911-52380696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               182, 132
               

               Conread position:
               1217-1360
               

               Cow position:
               chr11:34646553-34646696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.