Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01C030025.5 |
| Conread position: | 73-153 |
| Cow position: | chr11:53967010-53966930 (view UCSC Genome Browser custom track) |
| Alignm length: | 81 |
| Alignm identity: | 77 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 152-269 |
| Cow position: | chr11:53966423-53966306 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 264-449 |
| Cow position: | chr11:53966167-53965982 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 451-536 |
| Cow position: | chr11:53965732-53965647 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-681 |
| Cow position: | chr11:53963898-53963733 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 155 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 679-772 |
| Cow position: | chr11:53962928-53962835 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 766-921 |
| Cow position: | chr11:53962663-53962508 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 905-1008 |
| Cow position: | chr11:53961513-53961410 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1006-1083 |
| Cow position: | chr11:53959270-53959193 (view UCSC Genome Browser custom track) |
| Alignm length: | 78 |
| Alignm identity: | 74 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1076-1197 |
| Cow position: | chr11:53958538-53958417 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 117 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1195-1548 |
| Cow position: | chr11:53957420-53957061 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 176 |
| Conread position: | 1575-1716 |
| Cow position: | chr11:53957010-53956865 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 136 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
Show alignments to all cow chromosomes.