Cow genome map

Conread name: Ss1.1-Tra1-TCH01C070097.5

Conread position: 2-256
Cow position: chr1:29935191-29934944 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 163, 11

Conread position: 3-241
Cow position: chr1:29705367-29705124 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 20, 79

Conread position: 3-434
Cow position: chr1:56191590-56191154 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 81

Conread position: 3-452
Cow position: chr1:9525785-9525331 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 40

Conread position: 3-685
Cow position: chr1:76872447-76873140 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 58

Conread position: 4-591
Cow position: chr1:40577505-40578107 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 53

Conread position: 16-336
Cow position: chr1:52776002-52775668 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 236
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 39, 213

Conread position: 17-405
Cow position: chr1:19484428-19484027 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 19

Conread position: 17-685
Cow position: chr1:3669560-3668862 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 115

Conread position: 17-784
Cow position: chr1:70388739-70387958 (view UCSC Genome Browser custom track)
Alignm length: 800
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 27

Conread position: 18-376
Cow position: chr1:18763743-18763378 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 28

Conread position: 18-618
Cow position: chr1:33898834-33899448 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 217

Conread position: 18-685
Cow position: chr1:82921576-82920881 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 50

Conread position: 19-220
Cow position: chr1:89729933-89729729 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 139, 11

Conread position: 19-302
Cow position: chr1:56657685-56657395 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 134

Conread position: 19-314
Cow position: chr1:33714659-33714962 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 211
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 22, 119

Conread position: 19-458
Cow position: chr1:28568141-28567703 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 93

Conread position: 19-491
Cow position: chr1:88676050-88676543 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 212

Conread position: 19-554
Cow position: chr1:76861495-76860931 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 150

Conread position: 19-607
Cow position: chr1:74303794-74303183 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 173

Conread position: 19-668
Cow position: chr1:41518256-41517590 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 117

Conread position: 19-684
Cow position: chr1:99108669-99107970 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 214

Conread position: 19-685
Cow position: chr1:12058952-12058262 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 212

Conread position: 19-685
Cow position: chr1:21114835-21114163 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 152

Conread position: 19-685
Cow position: chr1:57695070-57694391 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 210

Conread position: 19-685
Cow position: chr1:61140007-61140679 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 211

Conread position: 19-685
Cow position: chr1:68603057-68602372 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 192

Conread position: 19-685
Cow position: chr1:69769379-69770077 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 212

Conread position: 19-685
Cow position: chr1:72996557-72997229 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 170

Conread position: 19-685
Cow position: chr1:76877601-76878290 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 210

Conread position: 19-685
Cow position: chr1:79633985-79633294 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 211

Conread position: 19-685
Cow position: chr1:89186872-89186200 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 136

Conread position: 19-686
Cow position: chr1:22726867-22727551 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 40

Conread position: 19-686
Cow position: chr1:79913520-79914176 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 140

Conread position: 19-686
Cow position: chr1:82863383-82864076 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 212

Conread position: 22-298
Cow position: chr1:81861451-81861173 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 148

Conread position: 22-306
Cow position: chr1:19236941-19236648 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 33, 132

Conread position: 22-314
Cow position: chr1:76740282-76739978 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 19, 209

Conread position: 22-447
Cow position: chr1:72036724-72036297 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 126

Conread position: 22-452
Cow position: chr1:21353866-21353435 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 24

Conread position: 22-462
Cow position: chr1:34914174-34914620 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 129

Conread position: 22-497
Cow position: chr1:72113575-72114053 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 149

Conread position: 22-656
Cow position: chr1:23579223-23578574 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 13

Conread position: 22-684
Cow position: chr1:17034022-17033335 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 211

Conread position: 22-685
Cow position: chr1:21544365-21545031 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 232

Conread position: 22-685
Cow position: chr1:53310808-53311488 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 121

Conread position: 22-685
Cow position: chr1:91901594-91902277 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 38

Conread position: 24-314
Cow position: chr1:44129446-44129151 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 54, 22

Conread position: 25-359
Cow position: chr1:54392449-54392106 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 233
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 163

Conread position: 25-385
Cow position: chr1:26445803-26446172 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 21

Conread position: 25-492
Cow position: chr1:11290030-11289545 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 25

Conread position: 25-661
Cow position: chr1:10011729-10011084 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 418
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 122, 21

Conread position: 25-684
Cow position: chr1:21090025-21090722 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 34

Conread position: 25-685
Cow position: chr1:60341626-60342314 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 34

Conread position: 25-685
Cow position: chr1:77747321-77748001 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 10

Conread position: 25-685
Cow position: chr1:87723104-87722429 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 34

Conread position: 26-574
Cow position: chr1:75832613-75833188 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 147

Conread position: 26-685
Cow position: chr1:27310458-27309819 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 105

Conread position: 27-457
Cow position: chr1:99980895-99981330 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 290
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 105

Conread position: 27-663
Cow position: chr1:51845041-51844394 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 424
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 14, 70

Conread position: 28-428
Cow position: chr1:30439570-30439978 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 7

Conread position: 32-401
Cow position: chr1:38383944-38383568 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 250
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 23, 169

Conread position: 33-684
Cow position: chr1:39250876-39250182 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 26

Conread position: 33-685
Cow position: chr1:18281565-18282235 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 199

Conread position: 34-379
Cow position: chr1:82383986-82384337 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 118

Conread position: 34-458
Cow position: chr1:67911349-67911775 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 291
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 32, 121

Conread position: 35-299
Cow position: chr1:48686429-48686167 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 44

Conread position: 35-388
Cow position: chr1:86612689-86613045 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 260
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 21, 45

Conread position: 35-425
Cow position: chr1:22216486-22216879 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 111

Conread position: 35-439
Cow position: chr1:67298021-67298417 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 275
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 24

Conread position: 35-451
Cow position: chr1:22760614-22761023 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 279
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 52, 37

Conread position: 35-458
Cow position: chr1:32837323-32837734 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 279
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 112, 24

Conread position: 35-649
Cow position: chr1:33391660-33392297 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 50

Conread position: 35-675
Cow position: chr1:44963890-44963232 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 208

Conread position: 35-685
Cow position: chr1:43568909-43568252 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 107

Conread position: 36-242
Cow position: chr1:52917869-52917656 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 153

Conread position: 36-302
Cow position: chr1:67186013-67185743 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 133

Conread position: 38-246
Cow position: chr1:54445260-54445048 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 40

Conread position: 39-685
Cow position: chr1:44677281-44677929 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 40

Conread position: 40-497
Cow position: chr1:29608513-29608034 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 73

Conread position: 47-574
Cow position: chr1:39481342-39480790 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 330

Conread position: 47-605
Cow position: chr1:44949872-44950443 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 12

Conread position: 47-685
Cow position: chr1:51966880-51967512 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 32

Conread position: 47-685
Cow position: chr1:61562640-61563295 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 32

Conread position: 47-685
Cow position: chr1:88267521-88266883 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 129

Conread position: 49-253
Cow position: chr1:63314511-63314296 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 187

Conread position: 49-306
Cow position: chr1:81305410-81305672 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 24, 178

Conread position: 49-363
Cow position: chr1:22631409-22631084 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 24, 67

Conread position: 49-380
Cow position: chr1:33188667-33189005 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 246
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 31, 103

Conread position: 49-397
Cow position: chr1:20003713-20003372 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 157

Conread position: 49-414
Cow position: chr1:31530884-31531259 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 250
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 23, 10

Conread position: 49-420
Cow position: chr1:67076349-67075974 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 236
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 170

Conread position: 49-448
Cow position: chr1:81374410-81373999 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 285
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 121, 35

Conread position: 49-475
Cow position: chr1:39538437-39537999 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 306
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 24, 213

Conread position: 49-490
Cow position: chr1:27543730-27544194 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 308
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 180

Conread position: 49-490
Cow position: chr1:31497514-31497962 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 86

Conread position: 49-521
Cow position: chr1:85143831-85143350 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 176

Conread position: 49-527
Cow position: chr1:70417263-70416772 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 10

Conread position: 49-574
Cow position: chr1:61537398-61536848 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 71

Conread position: 49-633
Cow position: chr1:57744609-57744020 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 401
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 92

Conread position: 49-685
Cow position: chr1:57970990-57970339 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 180

Conread position: 49-685
Cow position: chr1:100509348-100510006 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 180

Conread position: 49-730
Cow position: chr1:92280178-92279487 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 29

Conread position: 49-781
Cow position: chr1:28676687-28677421 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 166

Conread position: 50-574
Cow position: chr1:101126521-101125987 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 165

Conread position: 50-671
Cow position: chr1:93112771-93112123 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 58

Conread position: 51-314
Cow position: chr1:81839548-81839289 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 8

Conread position: 51-670
Cow position: chr1:14529853-14529215 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 7

Conread position: 53-314
Cow position: chr1:17400729-17400456 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 57

Conread position: 54-460
Cow position: chr1:53366525-53366948 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 291
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 19, 54

Conread position: 54-550
Cow position: chr1:31400800-31400284 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 176

Conread position: 54-604
Cow position: chr1:68093257-68093831 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 383
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 18, 94

Conread position: 54-685
Cow position: chr1:5504544-5505196 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 85

Conread position: 54-685
Cow position: chr1:24441444-24440801 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 170

Conread position: 54-685
Cow position: chr1:33548796-33548143 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 175

Conread position: 54-685
Cow position: chr1:42739018-42739665 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 102

Conread position: 54-685
Cow position: chr1:56141750-56141095 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 175

Conread position: 54-685
Cow position: chr1:76556098-76555453 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 70

Conread position: 54-741
Cow position: chr1:14562603-14561897 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 162

Conread position: 55-684
Cow position: chr1:101011309-101010658 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 64

Conread position: 57-349
Cow position: chr1:99629871-99629566 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 16, 51

Conread position: 57-685
Cow position: chr1:46838408-46839047 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 66

Conread position: 58-376
Cow position: chr1:79480371-79480042 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 223
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 164

Conread position: 59-255
Cow position: chr1:78362436-78362641 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 161

Conread position: 59-342
Cow position: chr1:53396135-53396435 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 95

Conread position: 59-348
Cow position: chr1:101671740-101671450 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 112

Conread position: 59-366
Cow position: chr1:42553958-42554268 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 95, 25

Conread position: 59-428
Cow position: chr1:48827276-48827662 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 179

Conread position: 59-505
Cow position: chr1:88300951-88301415 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 312
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 50, 26

Conread position: 59-626
Cow position: chr1:72598747-72599316 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 13

Conread position: 59-635
Cow position: chr1:69246443-69247024 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 52

Conread position: 59-668
Cow position: chr1:68949837-68950453 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 19

Conread position: 59-678
Cow position: chr1:29902574-29901937 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 169

Conread position: 59-682
Cow position: chr1:86363069-86363725 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 182

Conread position: 59-684
Cow position: chr1:98657337-98656696 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 149

Conread position: 59-685
Cow position: chr1:7196611-7195961 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 170

Conread position: 59-685
Cow position: chr1:30532410-30531762 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 165

Conread position: 59-685
Cow position: chr1:57121194-57120573 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 169

Conread position: 59-685
Cow position: chr1:71017733-71017089 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 415
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 108

Conread position: 59-687
Cow position: chr1:24563121-24562488 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 11

Conread position: 59-687
Cow position: chr1:24572508-24571875 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 11

Conread position: 59-757
Cow position: chr1:53310023-53309315 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 110

Conread position: 60-600
Cow position: chr1:93426678-93426123 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 364
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 5, 22

Conread position: 60-680
Cow position: chr1:22252344-22252942 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 8

Conread position: 61-506
Cow position: chr1:33352124-33352570 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 320
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 23, 98

Conread position: 62-684
Cow position: chr1:56424526-56425170 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 163

Conread position: 63-491
Cow position: chr1:70311897-70312335 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 285
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 37

Conread position: 63-685
Cow position: chr1:25089051-25088414 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 140

Conread position: 64-685
Cow position: chr1:40483660-40483032 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 423
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 8, 93

Conread position: 64-685
Cow position: chr1:58088927-58088297 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 157

Conread position: 64-685
Cow position: chr1:81328150-81328798 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 419
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 45, 74

Conread position: 64-784
Cow position: chr1:23039716-23040458 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 71

Conread position: 65-315
Cow position: chr1:36540121-36540382 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 18, 7

Conread position: 66-684
Cow position: chr1:89767974-89767348 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 99

Conread position: 66-685
Cow position: chr1:57525906-57526534 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 6

Conread position: 67-314
Cow position: chr1:99016973-99016738 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 115, 22

Conread position: 67-570
Cow position: chr1:17176009-17175493 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 327
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 52, 141

Conread position: 67-671
Cow position: chr1:76702031-76701423 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 91

Conread position: 67-685
Cow position: chr1:30306664-30306032 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 127

Conread position: 67-685
Cow position: chr1:100420223-100420856 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 46

Conread position: 68-685
Cow position: chr1:31239605-31238972 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 159

Conread position: 69-402
Cow position: chr1:57948686-57949026 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 233
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 17, 153

Conread position: 69-492
Cow position: chr1:68275132-68275563 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 152

Conread position: 69-685
Cow position: chr1:17939132-17938494 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 163

Conread position: 69-685
Cow position: chr1:56169582-56170218 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 69-685
Cow position: chr1:66972530-66971901 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 40

Conread position: 70-354
Cow position: chr1:41780472-41780179 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 26, 116

Conread position: 70-685
Cow position: chr1:3383691-3383059 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 70-685
Cow position: chr1:54115873-54116506 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 50

Conread position: 70-685
Cow position: chr1:92554133-92553517 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 154

Conread position: 72-272
Cow position: chr1:59206443-59206238 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 144

Conread position: 72-301
Cow position: chr1:15437293-15437059 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 15, 153

Conread position: 72-306
Cow position: chr1:82655276-82655510 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 115

Conread position: 72-306
Cow position: chr1:88293990-88294229 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 153

Conread position: 72-315
Cow position: chr1:59496321-59496568 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 14, 35

Conread position: 72-353
Cow position: chr1:7826598-7826889 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 15, 153

Conread position: 72-359
Cow position: chr1:92007893-92007602 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 47

Conread position: 72-366
Cow position: chr1:101796300-101796594 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 74

Conread position: 72-376
Cow position: chr1:16273186-16273496 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 32

Conread position: 72-379
Cow position: chr1:21224693-21224377 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 214
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 62

Conread position: 72-379
Cow position: chr1:57422186-57421874 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 153

Conread position: 72-385
Cow position: chr1:30716057-30715734 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 153

Conread position: 72-386
Cow position: chr1:13437838-13437514 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 224
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 15, 153

Conread position: 72-386
Cow position: chr1:63048330-63048009 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 153

Conread position: 72-407
Cow position: chr1:73444972-73444625 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 13, 153

Conread position: 72-425
Cow position: chr1:22241357-22241714 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 92

Conread position: 72-446
Cow position: chr1:19184771-19185157 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 29

Conread position: 72-458
Cow position: chr1:90973579-90973987 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 280
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 11, 153

Conread position: 72-466
Cow position: chr1:7164715-7165121 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-466
Cow position: chr1:89253503-89253111 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 255
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 121, 80

Conread position: 72-473
Cow position: chr1:17010065-17009653 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-476
Cow position: chr1:33364344-33363929 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-476
Cow position: chr1:53422526-53422937 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 150

Conread position: 72-492
Cow position: chr1:21995384-21994952 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 153

Conread position: 72-495
Cow position: chr1:98788423-98788851 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 35

Conread position: 72-506
Cow position: chr1:44973928-44974374 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 153

Conread position: 72-550
Cow position: chr1:99989131-99989630 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-574
Cow position: chr1:39546407-39546932 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 154

Conread position: 72-595
Cow position: chr1:73434700-73434156 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-617
Cow position: chr1:70863667-70864229 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 61

Conread position: 72-625
Cow position: chr1:40965775-40965206 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 153

Conread position: 72-625
Cow position: chr1:67289044-67289609 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 36

Conread position: 72-625
Cow position: chr1:86507002-86506421 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 35

Conread position: 72-629
Cow position: chr1:16118128-16118677 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 105

Conread position: 72-638
Cow position: chr1:89483754-89484320 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 70

Conread position: 72-660
Cow position: chr1:81342153-81342772 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 409
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 80, 19

Conread position: 72-666
Cow position: chr1:44702151-44701543 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 154

Conread position: 72-671
Cow position: chr1:8471534-8470918 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 41

Conread position: 72-671
Cow position: chr1:92034726-92035342 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-672
Cow position: chr1:40919765-40920384 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 150

Conread position: 72-672
Cow position: chr1:86704775-86705398 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 153

Conread position: 72-683
Cow position: chr1:30064985-30065634 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 62

Conread position: 72-684
Cow position: chr1:102551633-102552274 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 154

Conread position: 72-685
Cow position: chr1:4209288-4208655 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:6197667-6197018 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 152

Conread position: 72-685
Cow position: chr1:8556312-8556944 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 152

Conread position: 72-685
Cow position: chr1:8745123-8745755 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:18963102-18962473 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:22617780-22617149 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 115

Conread position: 72-685
Cow position: chr1:23098280-23098895 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 153

Conread position: 72-685
Cow position: chr1:23970182-23969532 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 68

Conread position: 72-685
Cow position: chr1:27493602-27494215 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 91

Conread position: 72-685
Cow position: chr1:28713668-28714297 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:29365033-29365664 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 153

Conread position: 72-685
Cow position: chr1:31317862-31317216 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 127

Conread position: 72-685
Cow position: chr1:31415594-31414964 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 93

Conread position: 72-685
Cow position: chr1:33853907-33854525 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:35599179-35598552 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:40057741-40058363 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 158

Conread position: 72-685
Cow position: chr1:40510625-40510002 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 149

Conread position: 72-685
Cow position: chr1:40682103-40681473 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 146

Conread position: 72-685
Cow position: chr1:49267508-49268142 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:54932552-54933186 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:55274410-55273784 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 34

Conread position: 72-685
Cow position: chr1:57363703-57363075 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 152

Conread position: 72-685
Cow position: chr1:59484238-59483605 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:61096123-61096757 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:61332336-61331705 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:61748805-61748192 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 71

Conread position: 72-685
Cow position: chr1:62927094-62927727 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:67005508-67006136 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:67832516-67831878 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:68847067-68846452 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 68

Conread position: 72-685
Cow position: chr1:69405783-69406416 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 153

Conread position: 72-685
Cow position: chr1:70069290-70069936 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:71560117-71559486 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:81358016-81357398 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 156

Conread position: 72-685
Cow position: chr1:81926534-81925925 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 65

Conread position: 72-685
Cow position: chr1:82478610-82479241 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:82910205-82909573 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:85794598-85795205 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 75

Conread position: 72-685
Cow position: chr1:86545511-86544879 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:86593678-86593046 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:89431032-89431661 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 75

Conread position: 72-685
Cow position: chr1:91104668-91105300 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr1:101833030-101833655 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 156

Conread position: 72-686
Cow position: chr1:21576176-21576801 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 37

Conread position: 72-686
Cow position: chr1:58171369-58171997 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 29

Conread position: 72-694
Cow position: chr1:79113063-79113687 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 149

Conread position: 72-767
Cow position: chr1:9261130-9261849 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 73-573
Cow position: chr1:100341277-100340762 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 351
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 105, 50

Conread position: 73-607
Cow position: chr1:29949179-29948643 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 38

Conread position: 73-711
Cow position: chr1:57659251-57659910 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 98

Conread position: 74-294
Cow position: chr1:100593289-100593065 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 150

Conread position: 74-388
Cow position: chr1:25054915-25055231 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 73, 32

Conread position: 74-506
Cow position: chr1:72309049-72308612 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 149

Conread position: 74-525
Cow position: chr1:32912306-32912742 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 301
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 72, 28

Conread position: 74-544
Cow position: chr1:13580122-13579633 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 15

Conread position: 74-625
Cow position: chr1:79454338-79453767 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-654
Cow position: chr1:72184234-72183650 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-659
Cow position: chr1:13251887-13251283 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 127

Conread position: 74-683
Cow position: chr1:61343084-61342450 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 295

Conread position: 74-685
Cow position: chr1:21377928-21377300 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 148

Conread position: 74-685
Cow position: chr1:26812442-26811814 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 77

Conread position: 74-685
Cow position: chr1:28875720-28876355 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 150

Conread position: 74-685
Cow position: chr1:31363469-31362855 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr1:32565299-32564673 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr1:38477945-38478563 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 73

Conread position: 74-685
Cow position: chr1:57570467-57571089 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 18

Conread position: 74-685
Cow position: chr1:58339559-58340180 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 118

Conread position: 74-685
Cow position: chr1:63603156-63602531 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr1:71794165-71794791 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr1:72986089-72986716 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 150

Conread position: 74-685
Cow position: chr1:73064706-73064077 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 150

Conread position: 74-685
Cow position: chr1:76618841-76618216 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 27

Conread position: 74-685
Cow position: chr1:85777831-85777201 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 150

Conread position: 74-685
Cow position: chr1:86600387-86599757 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr1:99916065-99916697 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr1:100708700-100709329 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-774
Cow position: chr1:18195253-18195957 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 151

Conread position: 75-407
Cow position: chr1:84442363-84442012 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 11, 152

Conread position: 75-425
Cow position: chr1:18137839-18137477 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 235
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 88, 230

Conread position: 75-551
Cow position: chr1:77109480-77109003 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 322
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 193, 9

Conread position: 75-685
Cow position: chr1:10725253-10725882 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 53

Conread position: 75-685
Cow position: chr1:58197814-58197180 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 157

Conread position: 75-685
Cow position: chr1:82369058-82369678 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 150

Conread position: 75-727
Cow position: chr1:102322467-102321801 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 34

Conread position: 75-767
Cow position: chr1:21677441-21678153 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 65

Conread position: 76-571
Cow position: chr1:38409852-38410349 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 57

Conread position: 77-428
Cow position: chr1:74284040-74283677 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 126

Conread position: 77-461
Cow position: chr1:40747403-40747030 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 260
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 231, 64

Conread position: 77-756
Cow position: chr1:72138842-72139535 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 32

Conread position: 81-277
Cow position: chr1:32071575-32071776 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 134

Conread position: 81-302
Cow position: chr1:100888523-100888750 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 66, 145

Conread position: 81-685
Cow position: chr1:63045521-63046143 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 143

Conread position: 82-671
Cow position: chr1:29037174-29037784 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 146

Conread position: 82-685
Cow position: chr1:91890757-91890133 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 142

Conread position: 83-685
Cow position: chr1:18025176-18024556 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 144

Conread position: 84-419
Cow position: chr1:59014701-59014363 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 232
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 75, 260

Conread position: 84-472
Cow position: chr1:52356628-52356233 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 19

Conread position: 84-685
Cow position: chr1:93857160-93857780 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 140

Conread position: 85-665
Cow position: chr1:82486233-82486820 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 359
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 74, 139

Conread position: 85-686
Cow position: chr1:55144687-55145304 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 136

Conread position: 86-625
Cow position: chr1:31724949-31724404 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 138

Conread position: 88-457
Cow position: chr1:30649530-30649163 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 246
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 15

Conread position: 88-682
Cow position: chr1:72086238-72086854 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 33

Conread position: 88-685
Cow position: chr1:11199988-11199372 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 64

Conread position: 89-685
Cow position: chr1:56725816-56726423 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 75

Conread position: 90-685
Cow position: chr1:90912473-90913087 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 135

Conread position: 93-685
Cow position: chr1:89090896-89090279 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 282

Conread position: 96-314
Cow position: chr1:89790654-89790441 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 12

Conread position: 98-684
Cow position: chr1:102776477-102775899 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 382
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 84, 129

Conread position: 99-685
Cow position: chr1:46613636-46613040 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 128

Conread position: 111-433
Cow position: chr1:55318975-55318649 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 113

Conread position: 111-671
Cow position: chr1:30103912-30103333 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 113

Conread position: 111-684
Cow position: chr1:61203047-61203641 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 113

Conread position: 111-685
Cow position: chr1:17437010-17436417 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 113

Conread position: 111-685
Cow position: chr1:31191741-31191166 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 111

Conread position: 111-685
Cow position: chr1:55779537-55780129 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 113

Conread position: 111-711
Cow position: chr1:89111500-89112123 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 37

Conread position: 118-364
Cow position: chr1:68250608-68250863 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 192
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 40, 106

Conread position: 118-686
Cow position: chr1:89493540-89492971 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 106

Conread position: 120-686
Cow position: chr1:73384156-73384724 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 104

Conread position: 121-379
Cow position: chr1:73403365-73403627 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 61, 29

Conread position: 121-633
Cow position: chr1:4276332-4276859 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 354
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 37, 104

Conread position: 125-771
Cow position: chr1:28414527-28413862 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 24

Conread position: 126-532
Cow position: chr1:52336060-52335623 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 98

Conread position: 126-686
Cow position: chr1:9263425-9262846 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 98

Conread position: 129-495
Cow position: chr1:54296670-54296302 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 95

Conread position: 132-685
Cow position: chr1:81301804-81302374 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 92

Conread position: 133-685
Cow position: chr1:84446374-84446937 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 96

Conread position: 134-686
Cow position: chr1:31253907-31253374 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 30

Conread position: 151-406
Cow position: chr1:56129300-56129562 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 59

Conread position: 156-685
Cow position: chr1:102432025-102431481 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 64

Conread position: 157-685
Cow position: chr1:12802797-12803350 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 63

Conread position: 157-685
Cow position: chr1:88178573-88179116 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 63

Conread position: 158-413
Cow position: chr1:34317055-34316796 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 24, 62

Conread position: 158-633
Cow position: chr1:27113432-27112950 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 62

Conread position: 159-452
Cow position: chr1:90291980-90291686 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 200
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 26, 45

Conread position: 159-616
Cow position: chr1:22222743-22223214 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 25

Conread position: 159-671
Cow position: chr1:63045430-63044905 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 61

Conread position: 162-360
Cow position: chr1:29041078-29041275 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 20, 57

Conread position: 162-364
Cow position: chr1:56438382-56438592 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 125, 18

Conread position: 162-410
Cow position: chr1:40899650-40899399 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 54

Conread position: 162-494
Cow position: chr1:23189712-23190052 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 242
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 21, 58

Conread position: 162-574
Cow position: chr1:54164313-54163902 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 23

Conread position: 162-605
Cow position: chr1:76850060-76849603 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 58

Conread position: 162-677
Cow position: chr1:100451929-100451417 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 26

Conread position: 162-683
Cow position: chr1:46802246-46802759 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 345
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 29, 58

Conread position: 163-432
Cow position: chr1:96185055-96184792 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 42

Conread position: 163-458
Cow position: chr1:98617189-98617487 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 57

Conread position: 163-605
Cow position: chr1:31596923-31597387 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 143

Conread position: 163-685
Cow position: chr1:65389280-65389817 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 57

Conread position: 163-686
Cow position: chr1:85530660-85530154 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 351
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 45

Conread position: 163-781
Cow position: chr1:56745597-56746250 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 56

Conread position: 163-781
Cow position: chr1:73762805-73762179 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 57

Conread position: 171-685
Cow position: chr1:21458428-21458946 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 49

Conread position: 173-685
Cow position: chr1:88389059-88389586 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 198

Conread position: 180-429
Cow position: chr1:58217017-58217264 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 87, 39

Conread position: 181-458
Cow position: chr1:96194430-96194146 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 38

Conread position: 182-684
Cow position: chr1:99689508-99690020 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 11

Conread position: 182-685
Cow position: chr1:79553240-79553754 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 31

Conread position: 183-685
Cow position: chr1:20847261-20846755 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 36

Conread position: 184-347
Cow position: chr1:42875874-42875706 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 149
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 35

Conread position: 184-584
Cow position: chr1:20378421-20378826 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 35

Conread position: 184-638
Cow position: chr1:24580165-24580605 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 38

Conread position: 184-683
Cow position: chr1:24654580-24655088 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 35

Conread position: 184-685
Cow position: chr1:61747416-61746910 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 35

Conread position: 184-685
Cow position: chr1:86327147-86326620 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 50

Conread position: 184-774
Cow position: chr1:62142177-62141580 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 38

Conread position: 186-684
Cow position: chr1:11324259-11324765 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 33

Conread position: 187-685
Cow position: chr1:53371103-53371616 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 36

Conread position: 188-643
Cow position: chr1:81666766-81666311 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 296
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 131, 13

Conread position: 189-566
Cow position: chr1:34532797-34533187 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 30

Conread position: 189-685
Cow position: chr1:32961756-32961245 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 26

Conread position: 189-685
Cow position: chr1:34684246-34684744 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 30

Conread position: 190-439
Cow position: chr1:9513905-9513652 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 125, 29

Conread position: 190-637
Cow position: chr1:79254803-79255236 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 29

Conread position: 190-662
Cow position: chr1:11666813-11666326 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 29

Conread position: 190-664
Cow position: chr1:17949231-17949731 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 30

Conread position: 190-670
Cow position: chr1:66504480-66504969 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 317
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 22

Conread position: 190-685
Cow position: chr1:13405637-13405127 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 174

Conread position: 190-685
Cow position: chr1:30078697-30079199 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 29

Conread position: 190-685
Cow position: chr1:66490332-66490839 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 29

Conread position: 190-685
Cow position: chr1:78922261-78921755 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 29

Conread position: 191-686
Cow position: chr1:3339411-3339925 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 28

Conread position: 192-465
Cow position: chr1:55328664-55328391 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 27

Conread position: 194-405
Cow position: chr1:102782881-102783096 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 120, 25

Conread position: 195-511
Cow position: chr1:51481077-51480752 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 222
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 103, 24

Conread position: 195-685
Cow position: chr1:99230292-99229800 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 327
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 109, 29

Conread position: 196-668
Cow position: chr1:25552562-25553050 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 23

Conread position: 198-685
Cow position: chr1:16798339-16797838 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 16

Conread position: 199-493
Cow position: chr1:6211998-6212302 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 20

Conread position: 199-685
Cow position: chr1:91672990-91673490 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 20

Conread position: 210-434
Cow position: chr1:101788547-101788310 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 106, 63

Conread position: 213-685
Cow position: chr1:56645107-56644620 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 151

Conread position: 214-388
Cow position: chr1:89729713-89729534 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 150

Conread position: 215-495
Cow position: chr1:52053319-52053606 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 126

Conread position: 215-618
Cow position: chr1:14361698-14361279 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 149

Conread position: 215-638
Cow position: chr1:65726917-65726473 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 279
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 101, 145

Conread position: 215-774
Cow position: chr1:31392522-31391933 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 14

Conread position: 216-685
Cow position: chr1:90606096-90605618 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 121

Conread position: 216-685
Cow position: chr1:94662428-94662911 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 148

Conread position: 218-488
Cow position: chr1:85322991-85323267 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 180
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 55

Conread position: 219-417
Cow position: chr1:100606066-100606260 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 45, 56

Conread position: 224-500
Cow position: chr1:88532463-88532180 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 92, 36

Conread position: 224-627
Cow position: chr1:40533291-40532871 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 148

Conread position: 224-684
Cow position: chr1:20831664-20832139 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 143

Conread position: 224-685
Cow position: chr1:8827802-8828279 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 141

Conread position: 224-685
Cow position: chr1:26607781-26607307 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 142

Conread position: 226-603
Cow position: chr1:42054736-42054350 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 270
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 200, 68

Conread position: 226-685
Cow position: chr1:9377704-9377221 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 131

Conread position: 228-685
Cow position: chr1:20648226-20648698 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 136

Conread position: 228-685
Cow position: chr1:21134321-21133849 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 136

Conread position: 229-671
Cow position: chr1:52172023-52171564 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 136

Conread position: 229-685
Cow position: chr1:97285871-97285397 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 139

Conread position: 230-654
Cow position: chr1:2369974-2369543 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 293
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 9, 134

Conread position: 231-507
Cow position: chr1:29704851-29704570 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 124

Conread position: 231-695
Cow position: chr1:22530009-22529539 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 133

Conread position: 233-684
Cow position: chr1:101131193-101130751 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 316
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 81, 131

Conread position: 235-414
Cow position: chr1:21294430-21294247 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 79, 25

Conread position: 235-625
Cow position: chr1:79335385-79334979 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 128

Conread position: 237-685
Cow position: chr1:72767231-72766778 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 130

Conread position: 240-549
Cow position: chr1:23658224-23658547 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 64

Conread position: 240-685
Cow position: chr1:21431501-21431050 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 124

Conread position: 245-494
Cow position: chr1:83170443-83170702 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 67, 119

Conread position: 248-560
Cow position: chr1:47162577-47162916 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 229
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 68, 34

Conread position: 248-685
Cow position: chr1:63341663-63341214 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 116

Conread position: 248-685
Cow position: chr1:73565671-73565220 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 116

Conread position: 249-685
Cow position: chr1:56665922-56666358 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 304, 418

Conread position: 251-503
Cow position: chr1:48411561-48411823 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 63, 112

Conread position: 251-694
Cow position: chr1:51875989-51875546 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 304
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 65, 40

Conread position: 256-685
Cow position: chr1:52755717-52755275 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 27

Conread position: 257-732
Cow position: chr1:67001025-67001516 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 107

Conread position: 261-842
Cow position: chr1:95766470-95765878 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 39

Conread position: 266-506
Cow position: chr1:18024003-18023754 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 103

Conread position: 269-731
Cow position: chr1:51392923-51393401 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 92

Conread position: 271-685
Cow position: chr1:11018274-11018693 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 33

Conread position: 273-694
Cow position: chr1:88393739-88393318 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 290
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 39, 7

Conread position: 276-686
Cow position: chr1:33443320-33442909 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 84

Conread position: 276-771
Cow position: chr1:56631223-56631742 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 88

Conread position: 276-774
Cow position: chr1:22481822-22481296 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 84

Conread position: 277-725
Cow position: chr1:52864434-52863972 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 74

Conread position: 278-685
Cow position: chr1:58169564-58169181 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 289
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 172, 27

Conread position: 280-626
Cow position: chr1:32071869-32072232 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 248
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 25, 0

Conread position: 280-685
Cow position: chr1:31351923-31351508 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 84

Conread position: 280-774
Cow position: chr1:19441687-19441178 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 84

Conread position: 280-774
Cow position: chr1:67975349-67974853 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 80

Conread position: 281-685
Cow position: chr1:33040194-33039774 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 84

Conread position: 282-685
Cow position: chr1:19236649-19236239 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 9

Conread position: 283-461
Cow position: chr1:100592811-100592637 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 80

Conread position: 283-685
Cow position: chr1:26142367-26141949 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 81

Conread position: 283-686
Cow position: chr1:86451191-86451600 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 69

Conread position: 283-728
Cow position: chr1:16574062-16573602 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 53

Conread position: 284-458
Cow position: chr1:17250813-17250992 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 28, 80

Conread position: 284-685
Cow position: chr1:18487335-18486919 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 80

Conread position: 284-685
Cow position: chr1:60251584-60251168 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 80

Conread position: 285-681
Cow position: chr1:71677212-71676807 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 79

Conread position: 285-710
Cow position: chr1:48345033-48345469 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 74

Conread position: 286-684
Cow position: chr1:17293007-17292604 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 78

Conread position: 287-757
Cow position: chr1:37542449-37541962 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 336
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 113, 32

Conread position: 288-668
Cow position: chr1:21133017-21132626 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 76

Conread position: 290-685
Cow position: chr1:62731659-62732059 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 20

Conread position: 293-685
Cow position: chr1:42888639-42888224 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 71

Conread position: 309-446
Cow position: chr1:87148758-87148622 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 313-551
Cow position: chr1:68446272-68446521 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 32

Conread position: 313-575
Cow position: chr1:99016146-99015875 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 45

Conread position: 313-587
Cow position: chr1:4336105-4336382 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 161, 45

Conread position: 313-665
Cow position: chr1:100912020-100912381 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 50

Conread position: 313-675
Cow position: chr1:20867726-20867357 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 45

Conread position: 313-685
Cow position: chr1:2181001-2181379 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 244
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 41

Conread position: 313-685
Cow position: chr1:26587828-26588208 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 45

Conread position: 313-685
Cow position: chr1:28812365-28811984 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 45

Conread position: 313-685
Cow position: chr1:33715834-33716218 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 50

Conread position: 313-685
Cow position: chr1:38711590-38711970 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 45

Conread position: 313-685
Cow position: chr1:48249592-48249973 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 45

Conread position: 313-685
Cow position: chr1:59203386-59203005 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 45

Conread position: 313-685
Cow position: chr1:61340443-61340062 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 45

Conread position: 313-685
Cow position: chr1:69504494-69504116 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 50

Conread position: 313-685
Cow position: chr1:71134770-71135161 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 274
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 140, 45

Conread position: 313-685
Cow position: chr1:76852287-76852673 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 52

Conread position: 313-725
Cow position: chr1:22287422-22287848 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 304
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 149, 45

Conread position: 313-774
Cow position: chr1:10006098-10005627 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 32

Conread position: 313-774
Cow position: chr1:57679486-57679017 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 45

Conread position: 313-783
Cow position: chr1:68819024-68818541 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 11

Conread position: 313-841
Cow position: chr1:39889016-39889579 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 45

Conread position: 314-535
Cow position: chr1:6164841-6165069 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 148, 49

Conread position: 314-685
Cow position: chr1:8603084-8602718 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 45

Conread position: 315-469
Cow position: chr1:100434104-100433951 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 316-784
Cow position: chr1:7837868-7837392 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 42

Conread position: 318-685
Cow position: chr1:53396596-53396963 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 40

Conread position: 321-611
Cow position: chr1:44128493-44128199 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 126, 37

Conread position: 324-564
Cow position: chr1:69212071-69211823 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 74, 31

Conread position: 324-565
Cow position: chr1:53251017-53250774 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 75, 31

Conread position: 324-617
Cow position: chr1:57397461-57397153 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 26, 41

Conread position: 324-668
Cow position: chr1:26573324-26572970 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 31

Conread position: 324-668
Cow position: chr1:56439524-56439171 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 47, 308

Conread position: 324-677
Cow position: chr1:10033398-10033761 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 38

Conread position: 324-685
Cow position: chr1:57635934-57635560 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 355

Conread position: 324-685
Cow position: chr1:58196153-58195803 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 245
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 229, 25

Conread position: 324-685
Cow position: chr1:82090802-82091153 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 34

Conread position: 324-685
Cow position: chr1:99864806-99865178 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 138, 34

Conread position: 325-685
Cow position: chr1:13271495-13271124 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 241
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 56, 30

Conread position: 328-664
Cow position: chr1:41462844-41463187 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 217
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 232

Conread position: 334-612
Cow position: chr1:24203749-24203476 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 211
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 109, 24

Conread position: 334-638
Cow position: chr1:30037603-30037909 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 212
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 116, 24

Conread position: 334-685
Cow position: chr1:63048477-63048836 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 24

Conread position: 335-544
Cow position: chr1:22629914-22629689 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 207

Conread position: 338-663
Cow position: chr1:99629148-99628821 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 20

Conread position: 338-685
Cow position: chr1:53647192-53647538 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 123, 20

Conread position: 339-613
Cow position: chr1:7299928-7300210 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 123, 12

Conread position: 339-647
Cow position: chr1:17237579-17237261 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 217
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 20

Conread position: 339-685
Cow position: chr1:59248843-59248494 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 151, 19

Conread position: 341-685
Cow position: chr1:13438029-13438379 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 17

Conread position: 341-685
Cow position: chr1:31106488-31106135 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 17

Conread position: 342-685
Cow position: chr1:15149737-15149385 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 16

Conread position: 345-685
Cow position: chr1:48811284-48810936 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 13

Conread position: 346-685
Cow position: chr1:4453864-4453526 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 12

Conread position: 347-685
Cow position: chr1:85630247-85630594 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 11

Conread position: 351-685
Cow position: chr1:18087344-18087687 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 12

Conread position: 355-685
Cow position: chr1:69671705-69671363 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 324

Conread position: 359-681
Cow position: chr1:82519198-82518868 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 7

Conread position: 359-685
Cow position: chr1:18226546-18226208 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 231
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 94

Conread position: 360-774
Cow position: chr1:11771866-11771430 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 258

Conread position: 361-685
Cow position: chr1:70381623-70381288 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 316

Conread position: 362-685
Cow position: chr1:20527086-20527418 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 25

Conread position: 363-685
Cow position: chr1:92008220-92008532 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 130, 62

Conread position: 363-774
Cow position: chr1:100536089-100536510 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 282
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 96

Conread position: 367-664
Cow position: chr1:5492068-5492364 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 114

Conread position: 367-685
Cow position: chr1:56205880-56205552 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 310

Conread position: 368-647
Cow position: chr1:83108678-83108389 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 106, 77

Conread position: 368-684
Cow position: chr1:63035550-63035879 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 108

Conread position: 368-711
Cow position: chr1:101524456-101524100 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 256

Conread position: 375-685
Cow position: chr1:67078886-67078566 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 302

Conread position: 377-685
Cow position: chr1:75402836-75403152 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 212

Conread position: 378-685
Cow position: chr1:47118898-47119215 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 299

Conread position: 382-684
Cow position: chr1:68251931-68252223 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 80, 140

Conread position: 383-544
Cow position: chr1:67823354-67823524 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 165

Conread position: 383-636
Cow position: chr1:32100146-32099882 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 79, 0

Conread position: 383-685
Cow position: chr1:19161915-19162226 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 274

Conread position: 385-574
Cow position: chr1:31123561-31123363 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 385-685
Cow position: chr1:81868524-81868217 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 203
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 64, 85

Conread position: 386-685
Cow position: chr1:78587509-78587200 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 291

Conread position: 387-685
Cow position: chr1:33189061-33189352 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 84

Conread position: 387-685
Cow position: chr1:57505741-57506049 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 290

Conread position: 390-610
Cow position: chr1:59592866-59592637 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 72, 141

Conread position: 390-684
Cow position: chr1:3743292-3742989 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 166

Conread position: 390-685
Cow position: chr1:42875690-42875398 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 83, 191

Conread position: 390-685
Cow position: chr1:45005922-45006232 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 72, 34

Conread position: 390-685
Cow position: chr1:95474935-95474643 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 64

Conread position: 390-686
Cow position: chr1:25053634-25053328 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 287

Conread position: 391-667
Cow position: chr1:99572602-99572324 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 72, 24

Conread position: 391-695
Cow position: chr1:24594570-24594883 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 13, 85

Conread position: 393-665
Cow position: chr1:76670967-76670690 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 99, 243

Conread position: 394-684
Cow position: chr1:57574623-57574329 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 105, 188

Conread position: 394-685
Cow position: chr1:101797554-101797848 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 79, 192

Conread position: 394-725
Cow position: chr1:61220392-61220746 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 152

Conread position: 395-677
Cow position: chr1:11854994-11854694 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 67, 175

Conread position: 396-598
Cow position: chr1:102783535-102783746 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 396-685
Cow position: chr1:73443891-73443592 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 281

Conread position: 398-684
Cow position: chr1:29461289-29461588 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 281

Conread position: 400-685
Cow position: chr1:47455014-47454719 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 277

Conread position: 409-685
Cow position: chr1:26537205-26536928 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 81, 6

Conread position: 409-685
Cow position: chr1:28520623-28520909 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 53, 266

Conread position: 409-685
Cow position: chr1:58418654-58418934 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 66

Conread position: 409-686
Cow position: chr1:90865018-90865295 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 209
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 24, 67

Conread position: 410-620
Cow position: chr1:84442937-84443158 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 413-685
Cow position: chr1:31534828-31535110 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 62, 263

Conread position: 414-784
Cow position: chr1:83135937-83136311 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 232
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 48, 210

Conread position: 416-620
Cow position: chr1:100606679-100606894 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 128

Conread position: 419-680
Cow position: chr1:18137449-18137182 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 120

Conread position: 419-686
Cow position: chr1:38279757-38279481 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 43, 256

Conread position: 420-602
Cow position: chr1:35711650-35711842 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 420-685
Cow position: chr1:1023816-1023540 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 42, 258

Conread position: 424-685
Cow position: chr1:77656535-77656803 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 140

Conread position: 424-781
Cow position: chr1:79589847-79590217 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 253
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 11

Conread position: 425-683
Cow position: chr1:20002009-20001738 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 48

Conread position: 425-685
Cow position: chr1:22012973-22012702 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 49, 124

Conread position: 425-685
Cow position: chr1:58218102-58218363 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 69, 30

Conread position: 426-608
Cow position: chr1:81861048-81860855 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 426-781
Cow position: chr1:88984459-88984086 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 260
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 48, 171

Conread position: 431-685
Cow position: chr1:19776097-19775833 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 31, 246

Conread position: 432-685
Cow position: chr1:45021231-45021490 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 18, 48

Conread position: 435-685
Cow position: chr1:68145973-68145713 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 27, 242

Conread position: 436-685
Cow position: chr1:7711783-7712038 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 191

Conread position: 438-685
Cow position: chr1:3970263-3970006 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 24, 239

Conread position: 439-685
Cow position: chr1:51883617-51883873 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 23, 238

Conread position: 442-685
Cow position: chr1:7324082-7324329 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 57, 33

Conread position: 442-685
Cow position: chr1:17765390-17765637 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 33

Conread position: 442-685
Cow position: chr1:52067638-52067885 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 48, 33

Conread position: 443-685
Cow position: chr1:55044256-55044004 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 31, 234

Conread position: 446-685
Cow position: chr1:70051256-70051497 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 48, 29

Conread position: 446-685
Cow position: chr1:72812176-72812418 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 29

Conread position: 446-685
Cow position: chr1:85807595-85807356 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 48, 29

Conread position: 447-781
Cow position: chr1:21353309-21352951 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 311

Conread position: 448-685
Cow position: chr1:53519683-53519922 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 46, 27

Conread position: 452-685
Cow position: chr1:30371926-30372163 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 42, 23

Conread position: 461-685
Cow position: chr1:9513338-9513112 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 72

Conread position: 462-767
Cow position: chr1:85337907-85338224 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 37, 88

Conread position: 463-685
Cow position: chr1:58192770-58192547 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 31, 12

Conread position: 469-685
Cow position: chr1:53649690-53649910 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 11

Conread position: 470-685
Cow position: chr1:22778846-22778628 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 25, 140

Conread position: 471-685
Cow position: chr1:30034669-30034885 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 21, 110

Conread position: 474-685
Cow position: chr1:475220-475435 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 21, 182

Conread position: 475-670
Cow position: chr1:71791968-71792173 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 17, 202

Conread position: 475-685
Cow position: chr1:2006648-2006437 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 81

Conread position: 475-685
Cow position: chr1:9595895-9595687 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 105

Conread position: 475-685
Cow position: chr1:14241016-14240810 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 82

Conread position: 475-685
Cow position: chr1:29428640-29428857 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 20, 199

Conread position: 475-685
Cow position: chr1:80565034-80564819 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 197

Conread position: 475-685
Cow position: chr1:83169484-83169700 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 20, 198

Conread position: 475-685
Cow position: chr1:98354352-98354137 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 197

Conread position: 479-672
Cow position: chr1:88027876-88028071 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 13, 78

Conread position: 479-685
Cow position: chr1:16838364-16838575 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 20, 193

Conread position: 480-685
Cow position: chr1:54472362-54472156 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 20, 188

Conread position: 481-685
Cow position: chr1:26446209-26446412 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 75

Conread position: 481-742
Cow position: chr1:86613359-86613619 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 134

Conread position: 482-685
Cow position: chr1:7405725-7405929 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 18, 186

Conread position: 482-685
Cow position: chr1:58440239-58440040 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 57

Conread position: 483-686
Cow position: chr1:88563856-88563655 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 16, 148

Conread position: 486-684
Cow position: chr1:12468732-12468533 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 12, 182

Conread position: 488-685
Cow position: chr1:2764174-2764374 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 183

Conread position: 488-685
Cow position: chr1:24922461-24922266 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 86

Conread position: 488-685
Cow position: chr1:89793013-89793211 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 12, 180

Conread position: 492-685
Cow position: chr1:55494000-55493806 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 8, 174

Conread position: 499-686
Cow position: chr1:31498194-31498379 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 36

Conread position: 500-662
Cow position: chr1:4375868-4375706 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 77

Conread position: 500-685
Cow position: chr1:20543299-20543485 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 153
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 53, 167

Conread position: 500-685
Cow position: chr1:20797899-20798077 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 78

Conread position: 500-685
Cow position: chr1:21785560-21785741 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 113, 47

Conread position: 500-685
Cow position: chr1:52053894-52054078 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 149
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 149

Conread position: 500-685
Cow position: chr1:98617746-98617930 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 53, 24

Conread position: 505-680
Cow position: chr1:22226722-22226898 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 48, 95

Conread position: 505-685
Cow position: chr1:54296065-54295885 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 48, 161

Conread position: 505-685
Cow position: chr1:57958479-57958305 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 51, 121

Conread position: 505-686
Cow position: chr1:38417897-38418082 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 24, 164

Conread position: 505-694
Cow position: chr1:53368289-53368482 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 16

Conread position: 506-680
Cow position: chr1:68610690-68610520 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 64

Conread position: 506-685
Cow position: chr1:11289310-11289131 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 47, 161

Conread position: 506-685
Cow position: chr1:13718753-13718579 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 47, 34

Conread position: 506-685
Cow position: chr1:52355593-52355414 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 47, 161

Conread position: 506-685
Cow position: chr1:58356654-58356475 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 161

Conread position: 506-686
Cow position: chr1:77104282-77104099 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 161, 0

Conread position: 507-685
Cow position: chr1:70038161-70037983 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 46, 155

Conread position: 513-664
Cow position: chr1:96194055-96193908 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 515-685
Cow position: chr1:8517982-8517812 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 152

Conread position: 515-685
Cow position: chr1:30494656-30494826 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 152

Conread position: 515-774
Cow position: chr1:54476889-54477154 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 23, 152

Conread position: 516-685
Cow position: chr1:57391756-57391593 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 518-685
Cow position: chr1:19158366-19158199 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 149

Conread position: 519-685
Cow position: chr1:99675242-99675078 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 24, 16

Conread position: 524-685
Cow position: chr1:26722565-26722404 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 29, 141

Conread position: 524-685
Cow position: chr1:73967609-73967770 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 29, 143

Conread position: 524-685
Cow position: chr1:77554900-77554740 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 29, 63

Conread position: 529-685
Cow position: chr1:51444341-51444501 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 86

Conread position: 529-685
Cow position: chr1:99118586-99118742 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 136

Conread position: 535-678
Cow position: chr1:67913182-67913324 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 75

Conread position: 538-685
Cow position: chr1:47079069-47078922 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 69

Conread position: 541-685
Cow position: chr1:31707596-31707740 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 124

Conread position: 541-685
Cow position: chr1:73463081-73463224 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 18

Conread position: 542-671
Cow position: chr1:9233751-9233877 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 542-685
Cow position: chr1:88676570-88676713 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 125

Conread position: 543-684
Cow position: chr1:72114069-72114210 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 124

Conread position: 543-685
Cow position: chr1:16338113-16337971 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 73

Conread position: 550-685
Cow position: chr1:9308894-9308762 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 552-665
Cow position: chr1:46411167-46411280 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 552-685
Cow position: chr1:33656059-33655927 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 552-685
Cow position: chr1:89234906-89234774 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 552-730
Cow position: chr1:46820741-46820933 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 553-783
Cow position: chr1:49133046-49132805 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 116, 180

Conread position: 556-685
Cow position: chr1:70535335-70535205 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 112

Conread position: 556-690
Cow position: chr1:22347257-22347388 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 559-684
Cow position: chr1:100888374-100888250 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 732-841
Cow position: chr1:31391913-31391803 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 732-841
Cow position: chr1:71044884-71045000 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 732-842
Cow position: chr1:4375412-4375298 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 732-842
Cow position: chr1:52508239-52508121 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 732-842
Cow position: chr1:93111964-93111849 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 733-841
Cow position: chr1:44837135-44837018 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 734-840
Cow position: chr1:99572182-99572071 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 734-842
Cow position: chr1:51967633-51967747 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 734-842
Cow position: chr1:92279427-92279316 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 75, 27

Conread position: 735-842
Cow position: chr1:53424310-53424420 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 80, 102

Show alignments to all cow chromosomes.