Cow genome map

Conread name: Ss1.1-Tra1-TCH01C070097.5

Conread position: 1-694
Cow position: chr11:60824025-60824703 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 16

Conread position: 3-302
Cow position: chr11:67446013-67445718 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 40

Conread position: 13-662
Cow position: chr11:10215374-10214713 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 59

Conread position: 16-685
Cow position: chr11:26562073-26561399 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 136

Conread position: 16-686
Cow position: chr11:28693744-28693048 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 219

Conread position: 16-774
Cow position: chr11:42372052-42372806 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 97

Conread position: 17-685
Cow position: chr11:10958048-10958750 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 214

Conread position: 17-685
Cow position: chr11:30201461-30200772 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 213

Conread position: 18-441
Cow position: chr11:52421706-52422136 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 42

Conread position: 19-396
Cow position: chr11:37280452-37280066 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 255
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 22, 128

Conread position: 19-448
Cow position: chr11:16120201-16119765 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 49

Conread position: 19-452
Cow position: chr11:73467186-73466742 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 147

Conread position: 19-521
Cow position: chr11:74346634-74347154 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 212

Conread position: 19-574
Cow position: chr11:17834336-17833766 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 115

Conread position: 19-601
Cow position: chr11:33042488-33041917 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 67

Conread position: 19-664
Cow position: chr11:45107083-45107745 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 16

Conread position: 19-683
Cow position: chr11:69167490-69168171 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 83

Conread position: 19-684
Cow position: chr11:81339157-81338476 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 212

Conread position: 19-685
Cow position: chr11:9080315-9079642 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 185

Conread position: 19-685
Cow position: chr11:10699517-10698825 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 212

Conread position: 19-685
Cow position: chr11:19100254-19099564 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 207

Conread position: 19-685
Cow position: chr11:22934360-22933702 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 213

Conread position: 19-685
Cow position: chr11:33000121-33000801 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 104

Conread position: 19-685
Cow position: chr11:63391243-63390558 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 40

Conread position: 19-685
Cow position: chr11:66731386-66732051 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 60

Conread position: 19-686
Cow position: chr11:28124747-28125437 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 40

Conread position: 19-728
Cow position: chr11:27659478-27660211 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 194

Conread position: 21-633
Cow position: chr11:21476849-21477478 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 177

Conread position: 22-683
Cow position: chr11:9249002-9248330 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 33

Conread position: 22-685
Cow position: chr11:28227548-28226857 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 210

Conread position: 23-452
Cow position: chr11:15720494-15720043 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 210

Conread position: 23-574
Cow position: chr11:42310204-42309659 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 30

Conread position: 25-306
Cow position: chr11:2350191-2350480 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 47, 34

Conread position: 25-306
Cow position: chr11:8265766-8266057 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 10

Conread position: 25-682
Cow position: chr11:57625936-57625272 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 34

Conread position: 25-685
Cow position: chr11:17105443-17104769 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 34

Conread position: 25-685
Cow position: chr11:17548398-17549079 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 34

Conread position: 25-685
Cow position: chr11:19061836-19061153 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 34

Conread position: 27-644
Cow position: chr11:77747797-77747187 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 51

Conread position: 29-635
Cow position: chr11:18124041-18123417 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 20

Conread position: 30-685
Cow position: chr11:4267907-4267234 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 197

Conread position: 35-262
Cow position: chr11:39996471-39996236 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 189

Conread position: 35-314
Cow position: chr11:54482122-54481841 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 123

Conread position: 35-439
Cow position: chr11:15994409-15994839 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 284
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 37, 76

Conread position: 35-452
Cow position: chr11:59627084-59626662 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 284
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 44, 114

Conread position: 35-565
Cow position: chr11:23124684-23124157 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 353
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 20, 155

Conread position: 35-601
Cow position: chr11:4054054-4053480 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 45

Conread position: 35-637
Cow position: chr11:15127064-15127686 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 24

Conread position: 35-662
Cow position: chr11:45549401-45550026 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 65

Conread position: 35-684
Cow position: chr11:5387725-5388362 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 45

Conread position: 35-685
Cow position: chr11:2834525-2835185 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 193

Conread position: 37-490
Cow position: chr11:3790043-3790511 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 65

Conread position: 47-662
Cow position: chr11:44232703-44233333 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 163

Conread position: 47-685
Cow position: chr11:28393152-28393798 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 182

Conread position: 49-254
Cow position: chr11:48981275-48981486 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 142

Conread position: 49-313
Cow position: chr11:62419983-62420247 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 24, 10

Conread position: 49-314
Cow position: chr11:77681927-77682190 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 24, 55

Conread position: 49-456
Cow position: chr11:8562387-8562805 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 141

Conread position: 49-684
Cow position: chr11:31864879-31865553 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 180

Conread position: 49-685
Cow position: chr11:10129480-10128844 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 29

Conread position: 49-685
Cow position: chr11:26785517-26786161 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 13

Conread position: 49-685
Cow position: chr11:53308634-53307974 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 238

Conread position: 49-693
Cow position: chr11:67864013-67863347 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 110

Conread position: 50-661
Cow position: chr11:76276998-76276379 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 407
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 24, 174

Conread position: 50-686
Cow position: chr11:21888162-21887511 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 176

Conread position: 54-574
Cow position: chr11:32270889-32270352 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 349
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 45

Conread position: 54-583
Cow position: chr11:7228520-7229073 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 175

Conread position: 54-685
Cow position: chr11:38833206-38832556 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 175

Conread position: 54-685
Cow position: chr11:44580963-44580312 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 175

Conread position: 56-684
Cow position: chr11:3085904-3085291 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 30

Conread position: 57-685
Cow position: chr11:39600579-39599941 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 15

Conread position: 59-317
Cow position: chr11:30181355-30181101 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 42

Conread position: 59-419
Cow position: chr11:30210379-30210736 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 9

Conread position: 59-424
Cow position: chr11:77235927-77236300 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 260
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 66

Conread position: 59-492
Cow position: chr11:13049657-13049230 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 19

Conread position: 59-527
Cow position: chr11:4061610-4061149 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 314
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 14, 100

Conread position: 59-618
Cow position: chr11:56479657-56479081 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 170

Conread position: 59-628
Cow position: chr11:66568329-66568914 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 370
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 26, 169

Conread position: 59-665
Cow position: chr11:24108211-24108832 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 408
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 169

Conread position: 59-686
Cow position: chr11:59600883-59601519 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 78

Conread position: 60-627
Cow position: chr11:4059801-4059238 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 370
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 13, 69

Conread position: 60-685
Cow position: chr11:41101193-41101838 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 103

Conread position: 61-452
Cow position: chr11:7385695-7386096 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 120

Conread position: 61-670
Cow position: chr11:7373731-7374350 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 24

Conread position: 61-684
Cow position: chr11:7378848-7379491 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 166

Conread position: 62-685
Cow position: chr11:60757693-60757054 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 167

Conread position: 64-685
Cow position: chr11:20494812-20494185 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 161

Conread position: 65-253
Cow position: chr11:65160735-65160926 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 57

Conread position: 66-631
Cow position: chr11:36764943-36765542 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 164

Conread position: 68-459
Cow position: chr11:9154906-9154503 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 160

Conread position: 69-314
Cow position: chr11:12950880-12950630 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 17, 156

Conread position: 69-511
Cow position: chr11:7326540-7326993 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 111

Conread position: 69-685
Cow position: chr11:7121678-7121042 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 69-685
Cow position: chr11:44154801-44154157 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 161

Conread position: 70-685
Cow position: chr11:49038090-49037476 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 154

Conread position: 72-272
Cow position: chr11:39807214-39807419 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 15, 153

Conread position: 72-293
Cow position: chr11:52845827-52846053 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 158

Conread position: 72-305
Cow position: chr11:418433-418203 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 32

Conread position: 72-314
Cow position: chr11:40327358-40327116 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 149

Conread position: 72-356
Cow position: chr11:49012772-49012476 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 153

Conread position: 72-373
Cow position: chr11:41744849-41745160 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 15, 153

Conread position: 72-400
Cow position: chr11:41234963-41235301 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 233
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 15, 153

Conread position: 72-433
Cow position: chr11:25098881-25098510 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-436
Cow position: chr11:38600649-38600275 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-446
Cow position: chr11:9732386-9731990 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 274
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 15, 158

Conread position: 72-488
Cow position: chr11:39585433-39585002 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-492
Cow position: chr11:27937697-27938121 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 40

Conread position: 72-492
Cow position: chr11:30104904-30104468 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-492
Cow position: chr11:30254516-30254944 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 156

Conread position: 72-542
Cow position: chr11:47737257-47736767 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-596
Cow position: chr11:15987541-15988082 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-602
Cow position: chr11:58819679-58820223 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 350
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 15, 32

Conread position: 72-638
Cow position: chr11:20805544-20804978 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 367
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 19, 134

Conread position: 72-661
Cow position: chr11:56917715-56917109 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 144

Conread position: 72-661
Cow position: chr11:86578215-86578822 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 153

Conread position: 72-662
Cow position: chr11:75403207-75402608 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 40

Conread position: 72-663
Cow position: chr11:76371771-76371167 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 48

Conread position: 72-665
Cow position: chr11:35143034-35142430 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-684
Cow position: chr11:49172212-49171578 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 153

Conread position: 72-685
Cow position: chr11:2533887-2534520 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr11:20731934-20731301 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 158

Conread position: 72-685
Cow position: chr11:27725612-27724980 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr11:32454350-32454975 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 53

Conread position: 72-685
Cow position: chr11:32478524-32477891 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr11:35862340-35861731 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 154

Conread position: 72-685
Cow position: chr11:38575194-38574564 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr11:41177217-41177840 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 77

Conread position: 72-685
Cow position: chr11:45652618-45651992 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 154

Conread position: 72-685
Cow position: chr11:47973563-47972931 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr11:58136007-58136638 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 43

Conread position: 72-685
Cow position: chr11:61398325-61397700 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr11:66860039-66859414 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 84

Conread position: 72-685
Cow position: chr11:67452943-67453576 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr11:72365476-72366109 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 153

Conread position: 72-685
Cow position: chr11:73799411-73798777 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 158

Conread position: 72-686
Cow position: chr11:58050632-58050003 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 153

Conread position: 72-711
Cow position: chr11:84966402-84967071 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-727
Cow position: chr11:40773741-40773091 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 153

Conread position: 72-728
Cow position: chr11:40403471-40402790 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 152

Conread position: 72-741
Cow position: chr11:49557040-49556345 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 153

Conread position: 74-472
Cow position: chr11:23882326-23882734 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-671
Cow position: chr11:10850411-10851021 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-671
Cow position: chr11:32078488-32077875 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-677
Cow position: chr11:7323791-7324421 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 140

Conread position: 74-684
Cow position: chr11:44254367-44254994 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 24

Conread position: 74-684
Cow position: chr11:67296717-67296087 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr11:11990280-11990918 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 145

Conread position: 74-685
Cow position: chr11:24395625-24396256 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr11:29663758-29663129 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr11:41168403-41167773 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr11:43511680-43511054 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr11:53429730-53429101 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr11:58139001-58139626 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr11:71331794-71332422 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 149

Conread position: 74-767
Cow position: chr11:33602338-33601624 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 295

Conread position: 75-507
Cow position: chr11:15652436-15652867 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 284
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 12, 37

Conread position: 75-685
Cow position: chr11:8444694-8444067 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 37

Conread position: 75-685
Cow position: chr11:11591276-11591898 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 150

Conread position: 75-685
Cow position: chr11:74928093-74928724 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 144

Conread position: 76-671
Cow position: chr11:39806008-39806590 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 81

Conread position: 77-452
Cow position: chr11:44874768-44875156 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 129

Conread position: 77-571
Cow position: chr11:72484674-72485177 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 39

Conread position: 77-683
Cow position: chr11:26122627-26122002 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 142

Conread position: 78-574
Cow position: chr11:82146342-82145846 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 137

Conread position: 78-654
Cow position: chr11:14468805-14469419 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 25

Conread position: 81-686
Cow position: chr11:8018064-8018687 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 139

Conread position: 82-306
Cow position: chr11:65001568-65001796 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 65, 142

Conread position: 84-505
Cow position: chr11:14260746-14260312 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 140

Conread position: 84-685
Cow position: chr11:12317770-12317149 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 141

Conread position: 84-685
Cow position: chr11:72312758-72313369 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 140

Conread position: 85-366
Cow position: chr11:7376435-7376721 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 74, 94

Conread position: 85-602
Cow position: chr11:25183367-25183909 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 132

Conread position: 85-685
Cow position: chr11:27056383-27055793 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 70

Conread position: 85-685
Cow position: chr11:30190085-30190675 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 138

Conread position: 85-730
Cow position: chr11:13045434-13044788 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 21

Conread position: 86-236
Cow position: chr11:13063706-13063552 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 134

Conread position: 86-447
Cow position: chr11:7328176-7328534 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 73, 58

Conread position: 86-570
Cow position: chr11:59470613-59471110 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 332
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 73, 24

Conread position: 86-672
Cow position: chr11:25564060-25564662 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 46

Conread position: 86-686
Cow position: chr11:25809440-25808825 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 138

Conread position: 87-685
Cow position: chr11:50511368-50510751 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 137

Conread position: 87-685
Cow position: chr11:76565756-76566385 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 57

Conread position: 88-685
Cow position: chr11:12354590-12353971 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 138

Conread position: 88-685
Cow position: chr11:82346806-82346220 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 59

Conread position: 91-684
Cow position: chr11:7320476-7321075 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 13

Conread position: 91-685
Cow position: chr11:3682539-3681921 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 101

Conread position: 92-605
Cow position: chr11:44872764-44873283 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 361
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 71, 110

Conread position: 93-662
Cow position: chr11:50834449-50833860 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 132

Conread position: 98-767
Cow position: chr11:54727779-54728473 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 127

Conread position: 100-451
Cow position: chr11:7332280-7332620 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 58, 20

Conread position: 103-685
Cow position: chr11:26399802-26400405 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 121

Conread position: 105-685
Cow position: chr11:8819549-8820131 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 372
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 46, 39

Conread position: 108-434
Cow position: chr11:41192387-41192053 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 39, 7

Conread position: 109-254
Cow position: chr11:4205385-4205534 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 115

Conread position: 109-413
Cow position: chr11:9387466-9387158 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 30

Conread position: 111-446
Cow position: chr11:13087986-13088330 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 113

Conread position: 111-684
Cow position: chr11:17280253-17279672 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 82

Conread position: 111-685
Cow position: chr11:15835249-15835833 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 113

Conread position: 111-685
Cow position: chr11:18068468-18067882 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 133

Conread position: 111-685
Cow position: chr11:44516842-44516248 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 113

Conread position: 111-704
Cow position: chr11:44515446-44514832 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 113

Conread position: 112-675
Cow position: chr11:26534170-26534744 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 112

Conread position: 112-770
Cow position: chr11:10884617-10885301 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 12

Conread position: 115-461
Cow position: chr11:39789666-39789306 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 241
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 70, 44

Conread position: 118-685
Cow position: chr11:18147201-18146625 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 90

Conread position: 119-645
Cow position: chr11:14735044-14734522 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 105

Conread position: 125-685
Cow position: chr11:49237619-49237043 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 98

Conread position: 125-729
Cow position: chr11:62575620-62575004 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 87

Conread position: 125-775
Cow position: chr11:39483631-39484294 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 99

Conread position: 126-670
Cow position: chr11:4024996-4024443 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 96

Conread position: 126-685
Cow position: chr11:26549826-26550397 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 88

Conread position: 126-685
Cow position: chr11:35738999-35738421 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 98

Conread position: 127-585
Cow position: chr11:77748124-77748600 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 97

Conread position: 127-685
Cow position: chr11:3495387-3495964 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 97

Conread position: 130-438
Cow position: chr11:40015316-40015630 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 217
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 28, 98

Conread position: 137-685
Cow position: chr11:41600340-41599767 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 61

Conread position: 150-685
Cow position: chr11:35542698-35542147 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 71

Conread position: 154-685
Cow position: chr11:63861261-63860722 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 66

Conread position: 157-418
Cow position: chr11:7322207-7322471 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 28, 63

Conread position: 157-617
Cow position: chr11:50136457-50135982 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 63

Conread position: 157-669
Cow position: chr11:10093261-10093780 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 63

Conread position: 157-685
Cow position: chr11:21897314-21896774 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 63

Conread position: 157-766
Cow position: chr11:52657276-52656655 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 63

Conread position: 158-686
Cow position: chr11:19072585-19073114 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 63

Conread position: 162-663
Cow position: chr11:3229501-3230013 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 206

Conread position: 162-742
Cow position: chr11:60604477-60605070 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 58

Conread position: 163-458
Cow position: chr11:31531534-31531823 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 57

Conread position: 163-685
Cow position: chr11:56462745-56463283 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 57

Conread position: 167-677
Cow position: chr11:80472548-80472044 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 53

Conread position: 170-314
Cow position: chr11:80789915-80789768 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 50

Conread position: 172-456
Cow position: chr11:10869892-10870179 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 211
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 10, 48

Conread position: 181-647
Cow position: chr11:77758199-77757752 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 316
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 270, 24

Conread position: 184-314
Cow position: chr11:72018399-72018527 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 99, 31

Conread position: 184-383
Cow position: chr11:68130016-68130219 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 116, 35

Conread position: 184-474
Cow position: chr11:28666941-28667234 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 35

Conread position: 184-496
Cow position: chr11:84386395-84386081 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 35

Conread position: 184-570
Cow position: chr11:66945925-66945528 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 36

Conread position: 184-684
Cow position: chr11:23494172-23494672 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 35

Conread position: 184-684
Cow position: chr11:31928874-31929370 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 35

Conread position: 185-644
Cow position: chr11:7380496-7380951 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 23

Conread position: 186-685
Cow position: chr11:62224670-62225179 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 33

Conread position: 188-451
Cow position: chr11:7375113-7375378 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 30

Conread position: 189-672
Cow position: chr11:5982543-5983016 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 29

Conread position: 189-685
Cow position: chr11:4033021-4032523 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 30

Conread position: 189-685
Cow position: chr11:59871225-59871736 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 30

Conread position: 189-685
Cow position: chr11:83284307-83284814 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 30

Conread position: 189-783
Cow position: chr11:260723-260112 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 30

Conread position: 190-685
Cow position: chr11:9707560-9708069 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 29

Conread position: 190-685
Cow position: chr11:61848321-61847812 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 29

Conread position: 190-685
Cow position: chr11:63653267-63652754 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 29

Conread position: 190-685
Cow position: chr11:64353910-64353401 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 29

Conread position: 191-685
Cow position: chr11:50949372-50949869 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 28

Conread position: 192-697
Cow position: chr11:8242712-8242195 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 27

Conread position: 196-436
Cow position: chr11:40457336-40457579 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 63, 23

Conread position: 196-507
Cow position: chr11:32025296-32025612 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 23

Conread position: 197-767
Cow position: chr11:40486585-40487169 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 25

Conread position: 199-486
Cow position: chr11:72869166-72869453 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 117, 23

Conread position: 199-669
Cow position: chr11:38640372-38640857 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 20

Conread position: 199-675
Cow position: chr11:34022369-34022838 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 334
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 108, 20

Conread position: 203-683
Cow position: chr11:31627961-31628435 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 15

Conread position: 205-642
Cow position: chr11:77777591-77777146 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 14

Conread position: 205-647
Cow position: chr11:77765476-77765047 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 295
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 95, 14

Conread position: 205-685
Cow position: chr11:21729578-21729099 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 14

Conread position: 215-726
Cow position: chr11:78778661-78778136 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 150

Conread position: 216-685
Cow position: chr11:85391408-85390929 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 152

Conread position: 219-416
Cow position: chr11:31570354-31570157 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 61

Conread position: 219-685
Cow position: chr11:7680404-7680884 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 145

Conread position: 222-662
Cow position: chr11:59005105-59004660 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 9

Conread position: 223-544
Cow position: chr11:46777789-46777468 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 224
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 93, 35

Conread position: 223-684
Cow position: chr11:1505552-1505076 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 146

Conread position: 224-638
Cow position: chr11:38068712-38069142 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 61

Conread position: 224-671
Cow position: chr11:6342906-6343367 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 140

Conread position: 224-685
Cow position: chr11:41313741-41314217 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 140

Conread position: 224-685
Cow position: chr11:75511747-75511270 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 140

Conread position: 226-684
Cow position: chr11:27922242-27922714 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 141

Conread position: 226-685
Cow position: chr11:8245612-8246086 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 12

Conread position: 227-685
Cow position: chr11:79749435-79748961 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 138

Conread position: 229-685
Cow position: chr11:11256522-11256988 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 132

Conread position: 231-636
Cow position: chr11:56891763-56891346 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 133

Conread position: 231-675
Cow position: chr11:27074528-27074962 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 304
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 80, 69

Conread position: 231-686
Cow position: chr11:48981747-48982216 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 134

Conread position: 236-507
Cow position: chr11:5280492-5280776 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 79, 234

Conread position: 237-457
Cow position: chr11:27283446-27283671 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 127

Conread position: 238-452
Cow position: chr11:3310427-3310640 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 69, 103

Conread position: 239-685
Cow position: chr11:67167386-67166944 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 77

Conread position: 242-574
Cow position: chr11:85731501-85731159 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 73, 96

Conread position: 242-685
Cow position: chr11:2568210-2567762 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 122

Conread position: 248-465
Cow position: chr11:26747620-26747837 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 55, 112

Conread position: 248-625
Cow position: chr11:56652986-56652582 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 124

Conread position: 256-685
Cow position: chr11:75553309-75552865 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 45

Conread position: 256-774
Cow position: chr11:67954660-67954103 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 113

Conread position: 260-590
Cow position: chr11:9238586-9238928 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 237
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 13, 20

Conread position: 260-685
Cow position: chr11:60223205-60222765 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 104

Conread position: 261-545
Cow position: chr11:13063126-13062829 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 12

Conread position: 261-796
Cow position: chr11:4205663-4206218 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 103

Conread position: 266-685
Cow position: chr11:30928874-30929303 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 93

Conread position: 275-684
Cow position: chr11:49551512-49551098 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 298
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 41, 89

Conread position: 279-452
Cow position: chr11:21853635-21853458 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 90

Conread position: 280-574
Cow position: chr11:46781827-46781519 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 34, 11

Conread position: 280-685
Cow position: chr11:72368554-72368974 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 84

Conread position: 284-491
Cow position: chr11:38701877-38702094 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 28, 80

Conread position: 287-685
Cow position: chr11:43992271-43991861 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 53

Conread position: 289-685
Cow position: chr11:14650276-14650692 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 79

Conread position: 294-494
Cow position: chr11:73136855-73137058 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 168, 6

Conread position: 298-684
Cow position: chr11:84773690-84774085 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 63

Conread position: 313-530
Cow position: chr11:62040997-62041223 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 160, 45

Conread position: 313-551
Cow position: chr11:8201191-8200944 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 149, 45

Conread position: 313-667
Cow position: chr11:66739676-66739317 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 21

Conread position: 313-685
Cow position: chr11:417913-417552 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 45

Conread position: 313-685
Cow position: chr11:1493305-1492927 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 45

Conread position: 313-685
Cow position: chr11:8266355-8266736 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 45

Conread position: 313-685
Cow position: chr11:36930991-36930609 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 287
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 112, 45

Conread position: 313-685
Cow position: chr11:52462822-52463203 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 50

Conread position: 313-685
Cow position: chr11:65281559-65281940 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 45

Conread position: 314-685
Cow position: chr11:32876403-32876022 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 190
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 148, 363

Conread position: 324-654
Cow position: chr11:83287178-83286838 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 10

Conread position: 327-684
Cow position: chr11:7330144-7330503 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 248
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 125, 35

Conread position: 328-685
Cow position: chr11:29613947-29614313 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 30

Conread position: 333-685
Cow position: chr11:18921023-18920665 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 25

Conread position: 334-675
Cow position: chr11:81577341-81576993 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 17

Conread position: 334-686
Cow position: chr11:59369436-59369113 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 240
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 340-686
Cow position: chr11:57754638-57754297 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 105

Conread position: 342-685
Cow position: chr11:58398902-58399253 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 16

Conread position: 348-685
Cow position: chr11:5482869-5482525 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 10

Conread position: 350-685
Cow position: chr11:52846053-52846395 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 226

Conread position: 355-602
Cow position: chr11:38021895-38021637 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 107, 0

Conread position: 358-639
Cow position: chr11:53690202-53690484 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 104, 24

Conread position: 361-685
Cow position: chr11:67920745-67920417 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 280

Conread position: 362-685
Cow position: chr11:16230066-16229726 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 118

Conread position: 365-685
Cow position: chr11:39151190-39151518 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 77

Conread position: 367-685
Cow position: chr11:41261335-41261007 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 310

Conread position: 370-466
Cow position: chr11:63168207-63168110 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 382-694
Cow position: chr11:37069585-37069281 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 231
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 13

Conread position: 384-563
Cow position: chr11:37676811-37677000 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 384-724
Cow position: chr11:33688409-33688068 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 272

Conread position: 387-685
Cow position: chr11:67599197-67599500 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 47

Conread position: 390-685
Cow position: chr11:46687617-46687909 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 69, 204

Conread position: 391-774
Cow position: chr11:46412266-46412662 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 224

Conread position: 392-685
Cow position: chr11:73513743-73513451 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 66

Conread position: 394-685
Cow position: chr11:8830155-8829848 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 57, 159

Conread position: 394-774
Cow position: chr11:58805196-58804797 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 278

Conread position: 395-685
Cow position: chr11:12177708-12178009 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 283

Conread position: 396-686
Cow position: chr11:33733955-33733656 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 48, 76

Conread position: 397-685
Cow position: chr11:26068495-26068197 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 211

Conread position: 398-643
Cow position: chr11:12493982-12493727 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 79

Conread position: 399-774
Cow position: chr11:29616670-29616283 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 155

Conread position: 400-606
Cow position: chr11:41725240-41725454 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 400-685
Cow position: chr11:14260332-14260036 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 150

Conread position: 401-684
Cow position: chr11:48485447-48485154 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 149

Conread position: 402-685
Cow position: chr11:37117702-37117989 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 60, 132

Conread position: 404-685
Cow position: chr11:50557212-50556923 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 58, 99

Conread position: 405-685
Cow position: chr11:24494177-24493887 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 213
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 57, 272

Conread position: 405-685
Cow position: chr11:44106307-44106606 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 57, 0

Conread position: 406-685
Cow position: chr11:2285345-2285634 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 269

Conread position: 406-685
Cow position: chr11:80789764-80789470 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 31, 275

Conread position: 412-685
Cow position: chr11:61426332-61426613 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 61

Conread position: 413-685
Cow position: chr11:25335788-25336060 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 85, 18

Conread position: 414-620
Cow position: chr11:9432068-9432283 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 44, 65

Conread position: 415-683
Cow position: chr11:17980639-17980373 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 26

Conread position: 415-685
Cow position: chr11:28631174-28631454 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 260

Conread position: 418-685
Cow position: chr11:72021066-72021338 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 203

Conread position: 422-683
Cow position: chr11:76767066-76767336 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 239

Conread position: 422-685
Cow position: chr11:9387984-9388258 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 47, 161

Conread position: 422-835
Cow position: chr11:41106734-41106303 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 287
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 76, 49

Conread position: 423-685
Cow position: chr11:51033936-51034197 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 188

Conread position: 423-687
Cow position: chr11:15995133-15995412 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 39, 113

Conread position: 426-664
Cow position: chr11:32254605-32254853 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 36, 200

Conread position: 435-685
Cow position: chr11:17853761-17854015 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 59, 40

Conread position: 435-685
Cow position: chr11:22618285-22618025 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 27, 242

Conread position: 436-685
Cow position: chr11:73466537-73466284 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 220

Conread position: 438-685
Cow position: chr11:7719851-7719594 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 37, 238

Conread position: 442-685
Cow position: chr11:81067423-81067670 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 56, 33

Conread position: 446-674
Cow position: chr11:40457854-40458085 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 29

Conread position: 446-685
Cow position: chr11:37279898-37279653 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 34

Conread position: 446-686
Cow position: chr11:3795917-3796157 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 58, 29

Conread position: 462-685
Cow position: chr11:26593084-26592856 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 32, 209

Conread position: 470-685
Cow position: chr11:13087966-13087746 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 28, 202

Conread position: 470-685
Cow position: chr11:19507032-19507250 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 200

Conread position: 472-783
Cow position: chr11:49936037-49935717 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 277

Conread position: 473-685
Cow position: chr11:5273869-5273653 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 21, 197

Conread position: 475-671
Cow position: chr11:38842558-38842357 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 146

Conread position: 475-685
Cow position: chr11:15495096-15495309 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 24, 195

Conread position: 475-685
Cow position: chr11:21471339-21471548 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 118

Conread position: 475-685
Cow position: chr11:42357911-42358123 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 24, 76

Conread position: 475-685
Cow position: chr11:75353909-75354125 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 29, 197

Conread position: 475-686
Cow position: chr11:30056918-30057129 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 55

Conread position: 475-774
Cow position: chr11:7376756-7377046 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 213
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 21

Conread position: 475-774
Cow position: chr11:10365681-10365371 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 157

Conread position: 478-733
Cow position: chr11:27284146-27284408 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 229

Conread position: 479-725
Cow position: chr11:38793297-38793557 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 482-685
Cow position: chr11:10872108-10871904 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 18, 184

Conread position: 482-685
Cow position: chr11:43361996-43361798 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 98

Conread position: 482-685
Cow position: chr11:48427865-48428065 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 19, 156

Conread position: 482-685
Cow position: chr11:59444829-59444625 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 18, 186

Conread position: 482-685
Cow position: chr11:62791612-62791816 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 18, 186

Conread position: 485-683
Cow position: chr11:24600708-24600909 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 7, 185

Conread position: 486-685
Cow position: chr11:45102768-45102568 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 14, 182

Conread position: 486-685
Cow position: chr11:57185086-57185286 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 14, 182

Conread position: 488-685
Cow position: chr11:23896243-23896441 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 178

Conread position: 492-685
Cow position: chr11:30776690-30776884 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 8, 176

Conread position: 493-685
Cow position: chr11:25759482-25759674 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 60, 174

Conread position: 500-671
Cow position: chr11:27938346-27938517 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 27

Conread position: 500-725
Cow position: chr11:25864864-25864634 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 35

Conread position: 503-685
Cow position: chr11:73137330-73137513 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 50, 165

Conread position: 504-685
Cow position: chr11:12763453-12763268 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 31, 166

Conread position: 505-685
Cow position: chr11:41229258-41229079 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 51, 93

Conread position: 505-685
Cow position: chr11:44915945-44915764 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 42

Conread position: 506-670
Cow position: chr11:26828857-26828697 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 97

Conread position: 506-671
Cow position: chr11:30255172-30255340 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 44, 164

Conread position: 506-684
Cow position: chr11:9154154-9153978 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 47, 148

Conread position: 506-685
Cow position: chr11:16548208-16548029 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 161

Conread position: 506-685
Cow position: chr11:17998189-17998012 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 506-685
Cow position: chr11:34638762-34638583 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 47, 161

Conread position: 506-685
Cow position: chr11:38599972-38599793 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 161

Conread position: 506-685
Cow position: chr11:41094120-41093941 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 47, 161

Conread position: 506-774
Cow position: chr11:45633356-45633081 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 201

Conread position: 507-672
Cow position: chr11:35242127-35241960 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 507-685
Cow position: chr11:52127952-52128130 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 46, 159

Conread position: 508-685
Cow position: chr11:65760862-65760685 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 22

Conread position: 513-685
Cow position: chr11:77236314-77236494 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 162

Conread position: 515-685
Cow position: chr11:33319365-33319198 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 34

Conread position: 516-663
Cow position: chr11:32782908-32783054 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 122

Conread position: 516-685
Cow position: chr11:24334241-24334072 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 37, 151

Conread position: 516-686
Cow position: chr11:19271510-19271343 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 82

Conread position: 520-672
Cow position: chr11:17782271-17782118 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 523-685
Cow position: chr11:8494262-8494423 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 56

Conread position: 524-685
Cow position: chr11:18438708-18438868 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 143

Conread position: 525-644
Cow position: chr11:82494645-82494524 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 528-685
Cow position: chr11:20285854-20285697 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 25, 139

Conread position: 529-685
Cow position: chr11:77746442-77746286 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 88

Conread position: 535-685
Cow position: chr11:3238072-3238222 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 132

Conread position: 538-685
Cow position: chr11:83000803-83000950 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 15, 127

Conread position: 542-685
Cow position: chr11:42794177-42794037 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 542-685
Cow position: chr11:54302317-54302458 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 552-683
Cow position: chr11:53285439-53285309 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 552-685
Cow position: chr11:74990409-74990541 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 553-685
Cow position: chr11:10043293-10043162 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 553-685
Cow position: chr11:13062617-13062486 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 553-698
Cow position: chr11:67849191-67849047 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 114

Conread position: 555-684
Cow position: chr11:4675823-4675695 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 555-685
Cow position: chr11:67348323-67348192 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 89, 112

Conread position: 556-685
Cow position: chr11:24584710-24584834 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 732-840
Cow position: chr11:25332691-25332576 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 732-842
Cow position: chr11:9432424-9432538 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 732-842
Cow position: chr11:21820355-21820237 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Show alignments to all cow chromosomes.