Cow genome map

Conread name: Ss1.1-Tra1-TCH01C070097.5

Conread position: 1-292
Cow position: chr14:13415600-13415891 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 10

Conread position: 3-685
Cow position: chr14:44773659-44772963 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 43

Conread position: 12-685
Cow position: chr14:23528823-23528130 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 171

Conread position: 13-685
Cow position: chr14:13307892-13308598 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 209

Conread position: 17-685
Cow position: chr14:44481729-44482414 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 102

Conread position: 18-268
Cow position: chr14:13782040-13782294 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 25, 42

Conread position: 18-302
Cow position: chr14:46434801-46435084 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 187
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 129, 108

Conread position: 18-671
Cow position: chr14:30464028-30464686 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 340
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 167, 188

Conread position: 18-680
Cow position: chr14:9510372-9509703 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 191

Conread position: 19-282
Cow position: chr14:29583176-29583446 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 105

Conread position: 19-301
Cow position: chr14:39299925-39300215 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 36, 207

Conread position: 19-376
Cow position: chr14:48361359-48361735 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 251
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 22, 122

Conread position: 19-685
Cow position: chr14:11563716-11564401 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 111

Conread position: 19-685
Cow position: chr14:13237622-13236933 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 40

Conread position: 19-685
Cow position: chr14:27041205-27040517 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 211

Conread position: 19-685
Cow position: chr14:36710863-36710195 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 81

Conread position: 19-685
Cow position: chr14:44235825-44236513 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 142

Conread position: 19-686
Cow position: chr14:37135987-37136670 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 211

Conread position: 19-686
Cow position: chr14:45187661-45186968 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 212

Conread position: 19-686
Cow position: chr14:46123306-46123976 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 135

Conread position: 19-774
Cow position: chr14:44292809-44293588 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 209

Conread position: 19-812
Cow position: chr14:21688449-21689250 (view UCSC Genome Browser custom track)
Alignm length: 823
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 98

Conread position: 20-570
Cow position: chr14:44260646-44261218 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 149

Conread position: 20-685
Cow position: chr14:48147749-48147092 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 132

Conread position: 22-313
Cow position: chr14:12612175-12612477 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 201
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 31, 209

Conread position: 22-421
Cow position: chr14:35383468-35383062 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 190

Conread position: 22-573
Cow position: chr14:35363675-35363118 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 65

Conread position: 22-600
Cow position: chr14:35502012-35502604 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 77

Conread position: 22-685
Cow position: chr14:17763211-17762523 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 210

Conread position: 22-686
Cow position: chr14:46375490-46376177 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 209

Conread position: 23-685
Cow position: chr14:14031203-14030539 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 147

Conread position: 25-684
Cow position: chr14:17489140-17488474 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 34

Conread position: 25-685
Cow position: chr14:35603279-35603948 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 92

Conread position: 29-685
Cow position: chr14:47602367-47603042 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 31

Conread position: 30-314
Cow position: chr14:33690367-33690654 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 23, 193

Conread position: 31-663
Cow position: chr14:1660641-1661291 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 201

Conread position: 35-436
Cow position: chr14:24992940-24992535 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 193

Conread position: 35-497
Cow position: chr14:11835826-11836309 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 197

Conread position: 35-686
Cow position: chr14:11636755-11637417 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 244

Conread position: 35-740
Cow position: chr14:39935954-39936666 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 443
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 38, 24

Conread position: 36-599
Cow position: chr14:469454-470030 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 370
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 22

Conread position: 37-683
Cow position: chr14:44254605-44253950 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 193

Conread position: 47-530
Cow position: chr14:34040902-34040429 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 8

Conread position: 49-245
Cow position: chr14:33671756-33671962 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 10

Conread position: 49-433
Cow position: chr14:44381546-44381923 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 264
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 59

Conread position: 49-570
Cow position: chr14:12802392-12801855 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 347
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 24, 177

Conread position: 49-673
Cow position: chr14:48401636-48401028 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 10

Conread position: 49-684
Cow position: chr14:33679272-33679912 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 29

Conread position: 49-685
Cow position: chr14:44583454-44584110 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 97

Conread position: 49-686
Cow position: chr14:40344745-40345384 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 333

Conread position: 49-696
Cow position: chr14:14421198-14420526 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 65

Conread position: 49-741
Cow position: chr14:49218539-49219256 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 180

Conread position: 49-773
Cow position: chr14:37256369-37257098 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 62

Conread position: 59-313
Cow position: chr14:47644599-47644858 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 26, 93

Conread position: 59-414
Cow position: chr14:44889012-44888646 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 253
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 20, 168

Conread position: 59-686
Cow position: chr14:29773896-29773262 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 38

Conread position: 59-725
Cow position: chr14:48706447-48707124 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 121

Conread position: 60-575
Cow position: chr14:41766295-41766830 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 77

Conread position: 60-662
Cow position: chr14:27052939-27052337 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 10

Conread position: 68-685
Cow position: chr14:39149144-39149746 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 402
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 19, 78

Conread position: 69-422
Cow position: chr14:45087441-45087798 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 16, 35

Conread position: 69-490
Cow position: chr14:33491062-33491491 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 37

Conread position: 69-668
Cow position: chr14:16189793-16190410 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 386
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 17, 137

Conread position: 70-446
Cow position: chr14:24835800-24836185 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 157

Conread position: 70-685
Cow position: chr14:19326023-19325393 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 121

Conread position: 70-685
Cow position: chr14:32449202-32449822 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 154

Conread position: 72-292
Cow position: chr14:34999388-34999605 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 130

Conread position: 72-306
Cow position: chr14:45026719-45026478 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 72-306
Cow position: chr14:46222319-46222558 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 153

Conread position: 72-376
Cow position: chr14:13581068-13581376 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 14, 33

Conread position: 72-434
Cow position: chr14:39772572-39772929 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 154

Conread position: 72-436
Cow position: chr14:37335472-37335100 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 153

Conread position: 72-454
Cow position: chr14:46006572-46006966 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 274
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 13, 146

Conread position: 72-505
Cow position: chr14:30663805-30663377 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 293
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 154

Conread position: 72-519
Cow position: chr14:8899521-8899979 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 52

Conread position: 72-587
Cow position: chr14:2296935-2297455 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 31

Conread position: 72-619
Cow position: chr14:35292289-35291727 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 31

Conread position: 72-648
Cow position: chr14:7226641-7227238 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-665
Cow position: chr14:47578851-47579465 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-684
Cow position: chr14:41445238-41445870 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 153

Conread position: 72-685
Cow position: chr14:749365-748732 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr14:2288494-2289119 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 146

Conread position: 72-685
Cow position: chr14:7475100-7475723 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 36

Conread position: 72-685
Cow position: chr14:9047071-9047704 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 153

Conread position: 72-685
Cow position: chr14:9450296-9449666 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr14:10309787-10310425 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 153

Conread position: 72-685
Cow position: chr14:13861290-13860675 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 111

Conread position: 72-685
Cow position: chr14:19549432-19550061 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr14:23255105-23254472 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr14:29045440-29044807 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr14:32584792-32584159 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr14:34167537-34168164 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 152

Conread position: 72-685
Cow position: chr14:37226406-37227039 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 153

Conread position: 72-685
Cow position: chr14:43560469-43561069 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 76

Conread position: 72-686
Cow position: chr14:46548386-46548999 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 72

Conread position: 72-689
Cow position: chr14:28691825-28691182 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 119

Conread position: 72-887
Cow position: chr14:22104324-22103491 (view UCSC Genome Browser custom track)
Alignm length: 839
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 73-685
Cow position: chr14:9512675-9512066 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 46

Conread position: 73-685
Cow position: chr14:12482668-12483267 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 294

Conread position: 74-363
Cow position: chr14:27989246-27988952 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 84, 146

Conread position: 74-663
Cow position: chr14:34668548-34667943 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-665
Cow position: chr14:11475054-11474443 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 90

Conread position: 74-685
Cow position: chr14:12740803-12740183 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 90

Conread position: 74-685
Cow position: chr14:12945526-12944931 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 413
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 11, 137

Conread position: 74-685
Cow position: chr14:16917488-16916861 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 73

Conread position: 74-685
Cow position: chr14:16997798-16997172 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 35

Conread position: 74-685
Cow position: chr14:17689364-17689994 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 151

Conread position: 74-685
Cow position: chr14:46302140-46302770 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 152

Conread position: 74-685
Cow position: chr14:50113606-50114233 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-686
Cow position: chr14:5531576-5532207 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 75-411
Cow position: chr14:25817458-25817802 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 243
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 148

Conread position: 75-419
Cow position: chr14:48851631-48851973 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 236
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 12, 145

Conread position: 82-458
Cow position: chr14:32472534-32472156 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 5

Conread position: 84-352
Cow position: chr14:42149771-42150032 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 67, 100

Conread position: 84-685
Cow position: chr14:11151667-11151050 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 142

Conread position: 84-773
Cow position: chr14:45237575-45238297 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 48

Conread position: 85-685
Cow position: chr14:38435276-38435897 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 287

Conread position: 86-685
Cow position: chr14:38915830-38915215 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 138

Conread position: 88-671
Cow position: chr14:26450243-26449668 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 137

Conread position: 89-685
Cow position: chr14:35427752-35428358 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 135

Conread position: 93-685
Cow position: chr14:50144488-50145092 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 63

Conread position: 96-774
Cow position: chr14:19449271-19448587 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 449
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 67, 128

Conread position: 98-306
Cow position: chr14:17758053-17757841 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 127

Conread position: 98-685
Cow position: chr14:34905785-34906391 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 122

Conread position: 101-685
Cow position: chr14:28351433-28350832 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 123

Conread position: 103-661
Cow position: chr14:20912150-20912725 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 362
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 44, 121

Conread position: 103-686
Cow position: chr14:17771912-17771310 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 56

Conread position: 105-685
Cow position: chr14:9810948-9811547 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 119

Conread position: 111-626
Cow position: chr14:20785377-20785903 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 113

Conread position: 111-685
Cow position: chr14:192456-193016 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 113

Conread position: 111-685
Cow position: chr14:15272988-15272396 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 113

Conread position: 112-539
Cow position: chr14:45165294-45165739 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 112

Conread position: 118-685
Cow position: chr14:19489266-19489847 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 105

Conread position: 124-685
Cow position: chr14:13275360-13275939 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 89

Conread position: 126-580
Cow position: chr14:20562574-20562102 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 52

Conread position: 126-685
Cow position: chr14:30477045-30476475 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 98

Conread position: 126-685
Cow position: chr14:45740018-45739456 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 38

Conread position: 155-585
Cow position: chr14:28210238-28210683 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 65

Conread position: 156-684
Cow position: chr14:48252126-48251583 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 64

Conread position: 156-783
Cow position: chr14:21533477-21534111 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 43

Conread position: 157-354
Cow position: chr14:8104902-8104706 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 158, 21

Conread position: 157-433
Cow position: chr14:39822804-39822526 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 25, 56

Conread position: 157-460
Cow position: chr14:18288721-18289030 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 25, 64

Conread position: 157-685
Cow position: chr14:35419204-35419737 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 63

Conread position: 162-574
Cow position: chr14:36344924-36344522 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 295
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 29, 58

Conread position: 163-685
Cow position: chr14:22027444-22026908 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 57

Conread position: 165-644
Cow position: chr14:12067147-12066666 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 19

Conread position: 170-645
Cow position: chr14:48827546-48828033 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 50

Conread position: 184-685
Cow position: chr14:13620082-13619577 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 35

Conread position: 187-677
Cow position: chr14:30738008-30738511 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 22

Conread position: 189-685
Cow position: chr14:21390987-21390496 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 37

Conread position: 190-312
Cow position: chr14:43563433-43563554 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 190-470
Cow position: chr14:31336938-31336645 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 30

Conread position: 190-672
Cow position: chr14:44691530-44692019 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 29

Conread position: 190-685
Cow position: chr14:5644761-5645272 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 29

Conread position: 190-685
Cow position: chr14:15337276-15336767 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 29

Conread position: 190-685
Cow position: chr14:19418451-19418960 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 29

Conread position: 190-685
Cow position: chr14:25430009-25430516 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 30

Conread position: 190-685
Cow position: chr14:37981961-37981458 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 29

Conread position: 190-685
Cow position: chr14:50069834-50069332 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 29

Conread position: 190-686
Cow position: chr14:46637175-46636668 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 34

Conread position: 191-685
Cow position: chr14:12859280-12858771 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 28

Conread position: 191-687
Cow position: chr14:39321203-39321707 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 339
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 71, 14

Conread position: 192-664
Cow position: chr14:8965606-8965128 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 304
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 28

Conread position: 194-685
Cow position: chr14:12902695-12903200 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 164

Conread position: 194-685
Cow position: chr14:20706069-20706549 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 332
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 94, 25

Conread position: 198-492
Cow position: chr14:27829603-27829913 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 90, 111

Conread position: 198-657
Cow position: chr14:33582441-33581964 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 21

Conread position: 198-685
Cow position: chr14:45576017-45576512 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 21

Conread position: 199-603
Cow position: chr14:9253895-9254314 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 20

Conread position: 199-685
Cow position: chr14:9849180-9848689 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 20

Conread position: 203-457
Cow position: chr14:46406704-46406956 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 100, 0

Conread position: 204-685
Cow position: chr14:13009832-13009389 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 312
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 84, 15

Conread position: 210-685
Cow position: chr14:44554230-44554712 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 166

Conread position: 215-418
Cow position: chr14:46504117-46504324 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 75, 81

Conread position: 215-675
Cow position: chr14:30593883-30593407 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 153

Conread position: 216-458
Cow position: chr14:14182612-14182859 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 91, 148

Conread position: 224-643
Cow position: chr14:37044170-37044576 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 276
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 30, 97

Conread position: 225-677
Cow position: chr14:45997149-45996685 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 17

Conread position: 228-685
Cow position: chr14:44077294-44076819 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 141

Conread position: 229-574
Cow position: chr14:12950567-12950906 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 113

Conread position: 231-595
Cow position: chr14:34763022-34762647 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 231, 0

Conread position: 237-685
Cow position: chr14:45789379-45789837 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 129

Conread position: 240-573
Cow position: chr14:33672994-33673335 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 126

Conread position: 240-677
Cow position: chr14:41478155-41478607 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 40

Conread position: 244-685
Cow position: chr14:1726557-1727012 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 245-685
Cow position: chr14:34629791-34629329 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 119

Conread position: 245-685
Cow position: chr14:45582743-45583180 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 84

Conread position: 248-685
Cow position: chr14:40968569-40969021 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 116

Conread position: 248-686
Cow position: chr14:40720285-40720738 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 307
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 26, 32

Conread position: 251-579
Cow position: chr14:30703867-30703532 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 72

Conread position: 251-728
Cow position: chr14:23230346-23229868 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 331
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 63, 127

Conread position: 253-684
Cow position: chr14:38459732-38459288 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 111

Conread position: 257-685
Cow position: chr14:40775221-40775636 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 276
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 13, 20

Conread position: 260-685
Cow position: chr14:38226567-38226141 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 289
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 44, 67

Conread position: 261-595
Cow position: chr14:43795179-43794829 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 55, 0

Conread position: 261-675
Cow position: chr14:29726332-29726737 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 301
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 48, 90

Conread position: 263-670
Cow position: chr14:9876893-9876487 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 101

Conread position: 265-842
Cow position: chr14:13463834-13464450 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 10

Conread position: 266-783
Cow position: chr14:21200351-21200897 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 105

Conread position: 269-685
Cow position: chr14:34394173-34394604 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 95

Conread position: 274-685
Cow position: chr14:18107011-18107410 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 273
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 45, 65

Conread position: 276-685
Cow position: chr14:48494687-48495108 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 314

Conread position: 277-685
Cow position: chr14:12545107-12545530 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 87

Conread position: 280-730
Cow position: chr14:29891589-29891128 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 84

Conread position: 283-461
Cow position: chr14:14678005-14678186 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 17

Conread position: 283-662
Cow position: chr14:45191988-45192370 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 278
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 33, 21

Conread position: 287-685
Cow position: chr14:13683019-13683432 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 82

Conread position: 290-685
Cow position: chr14:48491029-48491435 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 73

Conread position: 291-513
Cow position: chr14:35931987-35932219 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 73

Conread position: 291-668
Cow position: chr14:34353958-34354332 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 269
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 73

Conread position: 299-560
Cow position: chr14:20755859-20755596 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 163, 56

Conread position: 299-686
Cow position: chr14:21541444-21541045 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 65

Conread position: 304-472
Cow position: chr14:45709737-45709572 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 6

Conread position: 312-685
Cow position: chr14:8900791-8900410 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 55

Conread position: 313-494
Cow position: chr14:28285064-28284880 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 149, 11

Conread position: 313-654
Cow position: chr14:16037085-16037435 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 45

Conread position: 313-665
Cow position: chr14:50121930-50121577 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 161, 9

Conread position: 313-671
Cow position: chr14:35497033-35497371 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 246
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 63, 45

Conread position: 313-685
Cow position: chr14:28208799-28208415 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 50

Conread position: 313-685
Cow position: chr14:40476210-40475848 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 20

Conread position: 313-685
Cow position: chr14:45026141-45025763 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 45

Conread position: 314-685
Cow position: chr14:13282276-13282651 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 254
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 148, 44

Conread position: 318-615
Cow position: chr14:37882244-37882545 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 11

Conread position: 321-663
Cow position: chr14:46303200-46303555 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 141, 13

Conread position: 324-562
Cow position: chr14:34634187-34633948 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 41

Conread position: 324-684
Cow position: chr14:25694553-25694923 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 262
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 132, 10

Conread position: 324-685
Cow position: chr14:34674597-34674966 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 34

Conread position: 325-488
Cow position: chr14:43563592-43563759 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 137, 26

Conread position: 325-685
Cow position: chr14:38238597-38238230 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 7

Conread position: 329-686
Cow position: chr14:17757533-17757173 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 29

Conread position: 333-603
Cow position: chr14:15181701-15181425 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 111, 25

Conread position: 334-687
Cow position: chr14:25363965-25363606 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 24

Conread position: 340-685
Cow position: chr14:50029305-50028955 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 133, 28

Conread position: 342-685
Cow position: chr14:8103162-8102807 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 82

Conread position: 348-684
Cow position: chr14:26497252-26496909 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 10

Conread position: 355-685
Cow position: chr14:13769765-13769425 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 322

Conread position: 360-680
Cow position: chr14:25166220-25166548 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 196

Conread position: 360-685
Cow position: chr14:31882357-31882022 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 317

Conread position: 361-685
Cow position: chr14:50136804-50137137 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 278

Conread position: 363-636
Cow position: chr14:13091266-13091541 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 181
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 136, 89

Conread position: 364-685
Cow position: chr14:29641660-29641990 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 224
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 99, 134

Conread position: 367-625
Cow position: chr14:45084173-45084440 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 98, 177

Conread position: 371-835
Cow position: chr14:21726533-21726994 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 300
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 91, 155

Conread position: 380-677
Cow position: chr14:38813164-38812858 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 233

Conread position: 380-685
Cow position: chr14:10350327-10350029 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 188
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 8, 179

Conread position: 383-654
Cow position: chr14:14082311-14082593 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 385-644
Cow position: chr14:38043788-38044054 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 27

Conread position: 389-783
Cow position: chr14:41717649-41717251 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 131

Conread position: 393-684
Cow position: chr14:25235181-25234879 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 199
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 82, 61

Conread position: 397-684
Cow position: chr14:8998183-8998480 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 280

Conread position: 397-684
Cow position: chr14:49328542-49328837 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 77, 136

Conread position: 401-668
Cow position: chr14:8517087-8517366 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 72, 265

Conread position: 401-685
Cow position: chr14:7646697-7646981 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 61, 99

Conread position: 406-686
Cow position: chr14:12612810-12613099 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 52, 75

Conread position: 412-641
Cow position: chr14:43863515-43863275 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 413-685
Cow position: chr14:30665335-30665063 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 164
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 81, 31

Conread position: 416-644
Cow position: chr14:21745831-21746068 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 128

Conread position: 423-685
Cow position: chr14:13581469-13581735 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 7, 55

Conread position: 423-685
Cow position: chr14:47938499-47938231 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 8

Conread position: 423-686
Cow position: chr14:39773174-39773438 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 54

Conread position: 431-685
Cow position: chr14:46488772-46489036 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 31, 245

Conread position: 434-685
Cow position: chr14:13369832-13370093 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 41, 243

Conread position: 438-685
Cow position: chr14:11462471-11462214 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 239

Conread position: 438-685
Cow position: chr14:46959996-46960253 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 239

Conread position: 441-685
Cow position: chr14:8397168-8396914 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 234

Conread position: 442-685
Cow position: chr14:9744998-9744751 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 52, 33

Conread position: 442-685
Cow position: chr14:12616632-12616385 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 33

Conread position: 442-685
Cow position: chr14:44027197-44026949 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 33

Conread position: 444-685
Cow position: chr14:25684160-25683929 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 21, 50

Conread position: 444-685
Cow position: chr14:39301081-39301333 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 215

Conread position: 445-685
Cow position: chr14:43564055-43564300 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 213

Conread position: 462-694
Cow position: chr14:24836441-24836681 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 36, 213

Conread position: 466-685
Cow position: chr14:24922425-24922649 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 28, 205

Conread position: 470-685
Cow position: chr14:22690249-22690031 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 28, 202

Conread position: 473-683
Cow position: chr14:39822437-39822212 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 25, 90

Conread position: 475-670
Cow position: chr14:32499823-32500023 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 197

Conread position: 475-684
Cow position: chr14:44367328-44367542 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 17, 197

Conread position: 475-685
Cow position: chr14:8924747-8924962 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 15, 197

Conread position: 475-685
Cow position: chr14:13811384-13811169 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 172
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 17, 196

Conread position: 477-685
Cow position: chr14:48572705-48572492 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 195

Conread position: 478-685
Cow position: chr14:28116712-28116927 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 16, 57

Conread position: 482-685
Cow position: chr14:31289521-31289725 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 18, 186

Conread position: 482-685
Cow position: chr14:35016021-35016225 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 186

Conread position: 491-685
Cow position: chr14:5196233-5196034 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 10, 181

Conread position: 500-663
Cow position: chr14:38405657-38405821 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 500-684
Cow position: chr14:423868-424051 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 24

Conread position: 500-685
Cow position: chr14:10819922-10820108 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 53, 168

Conread position: 500-685
Cow position: chr14:20773846-20774033 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 169

Conread position: 500-725
Cow position: chr14:35382793-35382567 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 85

Conread position: 502-685
Cow position: chr14:42626992-42626811 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 506-685
Cow position: chr14:5994306-5994485 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 47, 161

Conread position: 506-685
Cow position: chr14:8885193-8885016 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 47, 18

Conread position: 506-685
Cow position: chr14:30581779-30581600 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 47, 163

Conread position: 506-685
Cow position: chr14:31155512-31155691 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 47, 161

Conread position: 506-685
Cow position: chr14:41755737-41755916 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 47, 161

Conread position: 506-685
Cow position: chr14:49995856-49995677 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 47, 160

Conread position: 506-725
Cow position: chr14:35932232-35932447 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 48, 58

Conread position: 507-685
Cow position: chr14:31400795-31400617 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 160

Conread position: 514-685
Cow position: chr14:47042759-47042928 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 93

Conread position: 515-685
Cow position: chr14:28993652-28993482 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 152

Conread position: 515-685
Cow position: chr14:38651607-38651777 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 152

Conread position: 516-684
Cow position: chr14:41220351-41220183 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 37, 100

Conread position: 521-685
Cow position: chr14:33835308-33835144 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 145

Conread position: 538-685
Cow position: chr14:9482670-9482817 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 129

Conread position: 543-685
Cow position: chr14:12833576-12833716 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 56

Conread position: 552-685
Cow position: chr14:40483728-40483596 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 556-686
Cow position: chr14:24980286-24980414 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 580-683
Cow position: chr14:28211722-28211824 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 35

Conread position: 732-842
Cow position: chr14:34354540-34354658 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 733-842
Cow position: chr14:28117047-28117166 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Show alignments to all cow chromosomes.