Cow genome map

Conread name: Ss1.1-Tra1-TCH01C070097.5

Conread position: 7-685
Cow position: chr23:26317817-26318488 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 83

Conread position: 15-433
Cow position: chr23:1011314-1010873 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 297
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 58, 14

Conread position: 15-446
Cow position: chr23:7492816-7492391 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 286
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 302, 63

Conread position: 18-685
Cow position: chr23:2792249-2791558 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 209

Conread position: 19-302
Cow position: chr23:34256441-34256147 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 100

Conread position: 19-684
Cow position: chr23:14971432-14970748 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 215

Conread position: 19-685
Cow position: chr23:2024569-2023880 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 186

Conread position: 19-685
Cow position: chr23:3285272-3285963 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 87

Conread position: 19-685
Cow position: chr23:20540334-20541025 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 151

Conread position: 19-685
Cow position: chr23:22169403-22170112 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 207

Conread position: 19-685
Cow position: chr23:38583462-38584124 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 191

Conread position: 21-686
Cow position: chr23:6222368-6223053 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 39

Conread position: 22-655
Cow position: chr23:29442579-29441921 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 208

Conread position: 22-685
Cow position: chr23:26307559-26308239 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 116

Conread position: 22-776
Cow position: chr23:16056260-16057006 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 87

Conread position: 25-466
Cow position: chr23:22989351-22988901 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 34

Conread position: 25-560
Cow position: chr23:15659035-15658482 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 22

Conread position: 25-685
Cow position: chr23:28221231-28221905 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 34

Conread position: 25-767
Cow position: chr23:16496745-16495976 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 165

Conread position: 31-604
Cow position: chr23:5872034-5871439 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 188

Conread position: 31-684
Cow position: chr23:2321417-2320741 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 200

Conread position: 34-304
Cow position: chr23:20178043-20177771 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 105

Conread position: 35-574
Cow position: chr23:25562976-25563534 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 126

Conread position: 41-479
Cow position: chr23:9560898-9560450 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 300
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 182

Conread position: 47-601
Cow position: chr23:30238812-30239389 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 8

Conread position: 48-501
Cow position: chr23:1800184-1800648 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 108

Conread position: 49-305
Cow position: chr23:1326856-1326591 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 180

Conread position: 50-467
Cow position: chr23:8099819-8100220 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 9

Conread position: 51-536
Cow position: chr23:36028831-36028323 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 178

Conread position: 51-665
Cow position: chr23:616697-616084 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 8

Conread position: 52-685
Cow position: chr23:2760450-2761103 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 176

Conread position: 54-449
Cow position: chr23:4637771-4637365 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 175

Conread position: 54-625
Cow position: chr23:19492110-19492704 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 174

Conread position: 54-685
Cow position: chr23:11781348-11781989 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 49

Conread position: 54-685
Cow position: chr23:15216283-15215630 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 69

Conread position: 63-685
Cow position: chr23:15350791-15351408 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 407
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 122, 61

Conread position: 64-595
Cow position: chr23:644152-643622 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 69

Conread position: 65-685
Cow position: chr23:15528150-15528791 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 163

Conread position: 66-291
Cow position: chr23:10555034-10554806 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 21

Conread position: 67-373
Cow position: chr23:1021355-1021045 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 5

Conread position: 67-685
Cow position: chr23:10937755-10937098 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 158

Conread position: 68-685
Cow position: chr23:2368391-2369014 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 157

Conread position: 69-295
Cow position: chr23:40372659-40372427 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 28, 48

Conread position: 71-685
Cow position: chr23:17877296-17876674 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 17

Conread position: 72-249
Cow position: chr23:19451932-19452114 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 144

Conread position: 72-272
Cow position: chr23:30212269-30212068 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 101

Conread position: 72-306
Cow position: chr23:19621271-19621030 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 153

Conread position: 72-356
Cow position: chr23:11027978-11028276 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 15, 153

Conread position: 72-422
Cow position: chr23:36097394-36097754 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-429
Cow position: chr23:2579168-2579530 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 16, 52

Conread position: 72-466
Cow position: chr23:15179640-15180042 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 278
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 75, 152

Conread position: 72-536
Cow position: chr23:943552-944036 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-571
Cow position: chr23:7043233-7042731 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 38

Conread position: 72-607
Cow position: chr23:19317059-19317615 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-625
Cow position: chr23:8705435-8706006 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-627
Cow position: chr23:4080716-4081292 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 158

Conread position: 72-637
Cow position: chr23:1248956-1248370 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-684
Cow position: chr23:22144727-22144106 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 56

Conread position: 72-685
Cow position: chr23:609300-609933 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr23:3417756-3417124 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 152

Conread position: 72-685
Cow position: chr23:4266044-4265412 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr23:5625004-5624368 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 153

Conread position: 72-685
Cow position: chr23:7130509-7129919 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 393
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 12, 31

Conread position: 72-685
Cow position: chr23:10422292-10421674 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 30

Conread position: 72-685
Cow position: chr23:14264922-14265551 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 95

Conread position: 72-685
Cow position: chr23:16612225-16611602 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 72

Conread position: 72-685
Cow position: chr23:20153647-20153017 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 152

Conread position: 72-685
Cow position: chr23:21009033-21008400 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr23:21773335-21772705 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr23:24119128-24119759 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 153

Conread position: 72-685
Cow position: chr23:25350931-25351564 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr23:27401714-27402341 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 36

Conread position: 72-685
Cow position: chr23:37199943-37199309 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 153

Conread position: 72-685
Cow position: chr23:39744463-39745068 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-686
Cow position: chr23:3708976-3709609 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 74-272
Cow position: chr23:4308599-4308398 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 72, 141

Conread position: 74-684
Cow position: chr23:4891269-4891899 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 151

Conread position: 74-685
Cow position: chr23:11343077-11343701 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 141

Conread position: 74-685
Cow position: chr23:14960373-14959747 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-781
Cow position: chr23:7359052-7359768 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 137

Conread position: 76-684
Cow position: chr23:15039721-15039114 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 58

Conread position: 77-551
Cow position: chr23:31892627-31893107 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 107

Conread position: 85-394
Cow position: chr23:1114676-1114988 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 217
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 72, 120

Conread position: 86-685
Cow position: chr23:1958719-1959331 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 140

Conread position: 87-676
Cow position: chr23:4516131-4516736 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 11

Conread position: 88-685
Cow position: chr23:1049286-1048669 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 137

Conread position: 93-685
Cow position: chr23:2720048-2720661 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 132

Conread position: 99-685
Cow position: chr23:11815252-11814638 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 27

Conread position: 103-565
Cow position: chr23:7370461-7370933 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 36

Conread position: 111-685
Cow position: chr23:1338857-1338286 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 110

Conread position: 115-595
Cow position: chr23:15504609-15505107 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 108

Conread position: 115-628
Cow position: chr23:40888060-40888589 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 106

Conread position: 118-685
Cow position: chr23:5396962-5396376 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 106

Conread position: 119-685
Cow position: chr23:28084474-28083889 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 105

Conread position: 126-685
Cow position: chr23:41143067-41143645 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 98

Conread position: 128-685
Cow position: chr23:11713039-11712463 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 96

Conread position: 157-432
Cow position: chr23:2410710-2410430 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 23, 66

Conread position: 157-457
Cow position: chr23:31647409-31647111 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 49

Conread position: 158-685
Cow position: chr23:26839631-26840168 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 48

Conread position: 163-507
Cow position: chr23:35928589-35928946 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 144, 20

Conread position: 184-448
Cow position: chr23:24612919-24613185 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 35

Conread position: 184-458
Cow position: chr23:29448592-29448314 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 35

Conread position: 184-648
Cow position: chr23:780403-779929 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 35

Conread position: 187-638
Cow position: chr23:16367621-16368086 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 308
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 16, 33

Conread position: 189-488
Cow position: chr23:4559291-4559583 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 80, 35

Conread position: 190-531
Cow position: chr23:3844342-3843987 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 29

Conread position: 190-685
Cow position: chr23:4533008-4532493 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 29

Conread position: 192-549
Cow position: chr23:1552624-1552261 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 137

Conread position: 192-708
Cow position: chr23:2039750-2040289 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 357
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 70, 13

Conread position: 193-422
Cow position: chr23:5410967-5411199 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 123, 26

Conread position: 198-616
Cow position: chr23:25593729-25594158 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 21

Conread position: 199-458
Cow position: chr23:35274586-35274849 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 21

Conread position: 205-401
Cow position: chr23:10417780-10417583 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 110, 14

Conread position: 210-307
Cow position: chr23:346018-345921 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 210-685
Cow position: chr23:24516560-24517038 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 152

Conread position: 215-440
Cow position: chr23:41096022-41095791 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 92, 149

Conread position: 215-685
Cow position: chr23:30634875-30634390 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 149

Conread position: 215-685
Cow position: chr23:33575145-33574666 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 322
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 62

Conread position: 224-685
Cow position: chr23:10680105-10679629 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 140

Conread position: 224-685
Cow position: chr23:17845737-17846202 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 33

Conread position: 225-684
Cow position: chr23:32008647-32008173 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 139

Conread position: 228-685
Cow position: chr23:31703627-31704099 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 136

Conread position: 231-574
Cow position: chr23:4807129-4807497 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 58, 148

Conread position: 231-664
Cow position: chr23:2437444-2437000 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 143

Conread position: 231-685
Cow position: chr23:3301591-3302059 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 133

Conread position: 231-685
Cow position: chr23:11172939-11172471 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 301
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 135

Conread position: 233-686
Cow position: chr23:31605165-31605633 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 131

Conread position: 238-551
Cow position: chr23:33434466-33434144 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 74, 135

Conread position: 242-685
Cow position: chr23:4799423-4798972 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 35

Conread position: 248-731
Cow position: chr23:25671005-25670514 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 117

Conread position: 257-625
Cow position: chr23:670652-671036 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 107

Conread position: 257-711
Cow position: chr23:4436394-4436865 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 107

Conread position: 258-685
Cow position: chr23:20390253-20389817 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 107

Conread position: 261-685
Cow position: chr23:28987115-28987547 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 104

Conread position: 264-685
Cow position: chr23:14216454-14216022 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 104

Conread position: 265-678
Cow position: chr23:3878346-3877945 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 99

Conread position: 276-641
Cow position: chr23:38301954-38301582 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 266
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 31, 90

Conread position: 280-662
Cow position: chr23:10904700-10905071 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 84

Conread position: 280-685
Cow position: chr23:29042566-29042987 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 85

Conread position: 284-654
Cow position: chr23:14790272-14790658 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 80

Conread position: 313-476
Cow position: chr23:794615-794452 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 160, 45

Conread position: 314-533
Cow position: chr23:8290202-8290430 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 139, 49

Conread position: 314-685
Cow position: chr23:2367932-2368313 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 315-725
Cow position: chr23:30211813-30211404 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 21

Conread position: 317-671
Cow position: chr23:27975096-27974735 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 240
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 118, 23

Conread position: 317-685
Cow position: chr23:11078115-11078482 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 41

Conread position: 321-593
Cow position: chr23:17403432-17403706 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 17

Conread position: 325-685
Cow position: chr23:2737060-2737426 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 256
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 126, 38

Conread position: 327-662
Cow position: chr23:36676296-36675959 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 225
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 172, 28

Conread position: 328-685
Cow position: chr23:31276338-31276703 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 30

Conread position: 333-493
Cow position: chr23:2169180-2169342 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 117, 25

Conread position: 337-685
Cow position: chr23:9194046-9193690 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 125, 21

Conread position: 338-685
Cow position: chr23:1326464-1326108 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 25

Conread position: 351-685
Cow position: chr23:1399347-1399010 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 12

Conread position: 358-562
Cow position: chr23:1925535-1925319 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 29

Conread position: 358-685
Cow position: chr23:11079250-11079588 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 318

Conread position: 360-492
Cow position: chr23:28305432-28305569 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 379-686
Cow position: chr23:14840282-14839964 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 52

Conread position: 390-677
Cow position: chr23:11127913-11128216 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 390-685
Cow position: chr23:771592-771287 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 287

Conread position: 396-672
Cow position: chr23:13820839-13820557 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 7

Conread position: 399-725
Cow position: chr23:20171289-20170943 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 61, 219

Conread position: 403-684
Cow position: chr23:2180934-2180643 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 59, 274

Conread position: 403-685
Cow position: chr23:5440830-5441122 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 272

Conread position: 408-684
Cow position: chr23:25357263-25357549 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 269

Conread position: 416-686
Cow position: chr23:40372430-40372149 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 243

Conread position: 422-628
Cow position: chr23:39388594-39388811 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 422-685
Cow position: chr23:1010603-1010340 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 33

Conread position: 422-685
Cow position: chr23:2409281-2409007 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 40, 256

Conread position: 423-686
Cow position: chr23:345523-345250 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 50, 253

Conread position: 431-774
Cow position: chr23:19637930-19637588 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 38

Conread position: 442-685
Cow position: chr23:26828210-26828457 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 52, 33

Conread position: 443-727
Cow position: chr23:13536390-13536685 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 56, 32

Conread position: 452-685
Cow position: chr23:4637390-4637151 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 6, 171

Conread position: 470-685
Cow position: chr23:29624964-29625178 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 31, 84

Conread position: 475-685
Cow position: chr23:28915324-28915537 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 30, 66

Conread position: 475-694
Cow position: chr23:7065770-7065551 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 75

Conread position: 475-707
Cow position: chr23:2532494-2532266 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 140, 26

Conread position: 475-783
Cow position: chr23:16999436-16999754 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 144

Conread position: 478-685
Cow position: chr23:29460259-29460045 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 0

Conread position: 492-685
Cow position: chr23:33817461-33817649 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 500-685
Cow position: chr23:10417571-10417382 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 80

Conread position: 500-686
Cow position: chr23:34346893-34347079 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 53, 80

Conread position: 506-685
Cow position: chr23:954771-954592 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 47, 161

Conread position: 506-685
Cow position: chr23:2473282-2473096 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 117

Conread position: 506-685
Cow position: chr23:31772241-31772062 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 161

Conread position: 508-680
Cow position: chr23:21277606-21277435 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 45, 7

Conread position: 512-685
Cow position: chr23:28305874-28306046 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 104

Conread position: 524-685
Cow position: chr23:30623454-30623294 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 144

Conread position: 524-685
Cow position: chr23:38935171-38935010 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 29, 143

Conread position: 527-685
Cow position: chr23:11070122-11070281 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 141

Conread position: 538-685
Cow position: chr23:27377975-27378124 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 131

Conread position: 552-685
Cow position: chr23:41015001-41015133 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 568-682
Cow position: chr23:21005882-21005996 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 99

Show alignments to all cow chromosomes.