Cow genome map

Conread name: Ss1.1-Tra1-TCH01C070097.5

Conread position: 7-686
Cow position:
Alignm length: 701
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 28

Conread position: 11-665
Cow position:
Alignm length: 684
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 107

Conread position: 11-680
Cow position:
Alignm length: 690
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 7

Conread position: 12-685
Cow position:
Alignm length: 698
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 42

Conread position: 14-686
Cow position:
Alignm length: 699
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 218

Conread position: 16-547
Cow position:
Alignm length: 553
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 14

Conread position: 16-547
Cow position:
Alignm length: 553
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 14

Conread position: 18-562
Cow position:
Alignm length: 572
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 217

Conread position: 19-378
Cow position:
Alignm length: 367
Alignm identity: 254
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 81

Conread position: 19-452
Cow position:
Alignm length: 450
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 232

Conread position: 19-496
Cow position:
Alignm length: 490
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 145

Conread position: 19-672
Cow position:
Alignm length: 699
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 215

Conread position: 19-681
Cow position:
Alignm length: 687
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 49

Conread position: 19-682
Cow position:
Alignm length: 680
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 122

Conread position: 19-685
Cow position:
Alignm length: 695
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 212

Conread position: 19-685
Cow position:
Alignm length: 697
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 151

Conread position: 19-685
Cow position:
Alignm length: 696
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 208

Conread position: 19-685
Cow position:
Alignm length: 693
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 81

Conread position: 22-405
Cow position:
Alignm length: 400
Alignm identity: 264
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 85

Conread position: 22-685
Cow position:
Alignm length: 694
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 209

Conread position: 22-685
Cow position:
Alignm length: 698
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 211

Conread position: 25-685
Cow position:
Alignm length: 682
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 38

Conread position: 26-560
Cow position:
Alignm length: 564
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 48

Conread position: 30-638
Cow position:
Alignm length: 629
Alignm identity: 400
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 50, 14

Conread position: 35-277
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 114

Conread position: 35-416
Cow position:
Alignm length: 398
Alignm identity: 268
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 39, 24

Conread position: 35-626
Cow position:
Alignm length: 619
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 103

Conread position: 36-685
Cow position:
Alignm length: 678
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 90

Conread position: 46-303
Cow position:
Alignm length: 270
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 179

Conread position: 47-488
Cow position:
Alignm length: 459
Alignm identity: 304
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 23, 122

Conread position: 47-510
Cow position:
Alignm length: 479
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 12

Conread position: 49-314
Cow position:
Alignm length: 281
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 62

Conread position: 49-361
Cow position:
Alignm length: 332
Alignm identity: 229
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 24, 80

Conread position: 49-411
Cow position:
Alignm length: 377
Alignm identity: 255
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 48, 144

Conread position: 49-428
Cow position:
Alignm length: 389
Alignm identity: 256
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 114

Conread position: 49-685
Cow position:
Alignm length: 665
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 33

Conread position: 49-730
Cow position:
Alignm length: 705
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 29

Conread position: 54-685
Cow position:
Alignm length: 657
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 5

Conread position: 55-298
Cow position:
Alignm length: 254
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 20, 176

Conread position: 59-460
Cow position:
Alignm length: 419
Alignm identity: 282
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 14, 46

Conread position: 59-647
Cow position:
Alignm length: 614
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 170

Conread position: 59-684
Cow position:
Alignm length: 641
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 65

Conread position: 59-685
Cow position:
Alignm length: 650
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 170

Conread position: 59-685
Cow position:
Alignm length: 650
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 171

Conread position: 60-465
Cow position:
Alignm length: 421
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 37

Conread position: 61-421
Cow position:
Alignm length: 369
Alignm identity: 258
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 152

Conread position: 62-568
Cow position:
Alignm length: 522
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 166

Conread position: 64-671
Cow position:
Alignm length: 650
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 165

Conread position: 64-756
Cow position:
Alignm length: 724
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 150

Conread position: 67-626
Cow position:
Alignm length: 583
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 158

Conread position: 68-644
Cow position:
Alignm length: 602
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 161

Conread position: 69-307
Cow position:
Alignm length: 245
Alignm identity: 168
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 18, 150

Conread position: 69-685
Cow position:
Alignm length: 632
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 151

Conread position: 70-774
Cow position:
Alignm length: 731
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 72-334
Cow position:
Alignm length: 272
Alignm identity: 190
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 65

Conread position: 72-356
Cow position:
Alignm length: 297
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 153

Conread position: 72-359
Cow position:
Alignm length: 297
Alignm identity: 207
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 15, 150

Conread position: 72-396
Cow position:
Alignm length: 337
Alignm identity: 226
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 153

Conread position: 72-397
Cow position:
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 34

Conread position: 72-432
Cow position:
Alignm length: 374
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 296

Conread position: 72-446
Cow position:
Alignm length: 387
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-457
Cow position:
Alignm length: 398
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-469
Cow position:
Alignm length: 411
Alignm identity: 269
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 71, 37

Conread position: 72-492
Cow position:
Alignm length: 432
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 40

Conread position: 72-546
Cow position:
Alignm length: 492
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 151

Conread position: 72-648
Cow position:
Alignm length: 599
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 152

Conread position: 72-671
Cow position:
Alignm length: 636
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 56

Conread position: 72-683
Cow position:
Alignm length: 639
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position:
Alignm length: 649
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position:
Alignm length: 638
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position:
Alignm length: 638
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position:
Alignm length: 637
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position:
Alignm length: 650
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position:
Alignm length: 637
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position:
Alignm length: 648
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 153

Conread position: 72-685
Cow position:
Alignm length: 639
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 153

Conread position: 72-685
Cow position:
Alignm length: 637
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position:
Alignm length: 636
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 152

Conread position: 72-686
Cow position:
Alignm length: 636
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 29

Conread position: 72-686
Cow position:
Alignm length: 634
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 74

Conread position: 74-457
Cow position:
Alignm length: 396
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 147

Conread position: 74-647
Cow position:
Alignm length: 589
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position:
Alignm length: 635
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-686
Cow position:
Alignm length: 635
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 51

Conread position: 75-685
Cow position:
Alignm length: 635
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 150

Conread position: 76-654
Cow position:
Alignm length: 602
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 149

Conread position: 78-685
Cow position:
Alignm length: 631
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 147

Conread position: 81-369
Cow position:
Alignm length: 298
Alignm identity: 203
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 90, 127

Conread position: 82-685
Cow position:
Alignm length: 629
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 27

Conread position: 84-686
Cow position:
Alignm length: 620
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 140

Conread position: 87-607
Cow position:
Alignm length: 552
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 137

Conread position: 88-505
Cow position:
Alignm length: 436
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 137

Conread position: 88-572
Cow position:
Alignm length: 511
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 15

Conread position: 88-685
Cow position:
Alignm length: 622
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 137

Conread position: 89-662
Cow position:
Alignm length: 593
Alignm identity: 372
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 225, 66

Conread position: 92-685
Cow position:
Alignm length: 616
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 17

Conread position: 96-439
Cow position:
Alignm length: 354
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 90

Conread position: 97-680
Cow position:
Alignm length: 609
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 127

Conread position: 103-685
Cow position:
Alignm length: 615
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 62

Conread position: 111-507
Cow position:
Alignm length: 415
Alignm identity: 276
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 42, 91

Conread position: 111-685
Cow position:
Alignm length: 597
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 113

Conread position: 114-684
Cow position:
Alignm length: 595
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 37

Conread position: 115-686
Cow position:
Alignm length: 594
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 109

Conread position: 118-665
Cow position:
Alignm length: 571
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 106

Conread position: 120-725
Cow position:
Alignm length: 644
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 104

Conread position: 124-774
Cow position:
Alignm length: 668
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 97

Conread position: 126-574
Cow position:
Alignm length: 478
Alignm identity: 322
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 31, 51

Conread position: 127-686
Cow position:
Alignm length: 577
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 157-665
Cow position:
Alignm length: 522
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 63

Conread position: 162-685
Cow position:
Alignm length: 551
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 26

Conread position: 162-685
Cow position:
Alignm length: 545
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 58

Conread position: 163-506
Cow position:
Alignm length: 363
Alignm identity: 234
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 58

Conread position: 165-574
Cow position:
Alignm length: 420
Alignm identity: 294
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 19, 5

Conread position: 170-685
Cow position:
Alignm length: 534
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 50

Conread position: 180-305
Cow position:
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 180-458
Cow position:
Alignm length: 280
Alignm identity: 195
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 10, 40

Conread position: 183-685
Cow position:
Alignm length: 521
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 36

Conread position: 184-684
Cow position:
Alignm length: 514
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 21

Conread position: 187-447
Cow position:
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 187-684
Cow position:
Alignm length: 520
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 32

Conread position: 189-655
Cow position:
Alignm length: 490
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 25

Conread position: 189-665
Cow position:
Alignm length: 495
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 30

Conread position: 189-684
Cow position:
Alignm length: 513
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 33

Conread position: 189-685
Cow position:
Alignm length: 520
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 30

Conread position: 190-671
Cow position:
Alignm length: 499
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 29

Conread position: 190-684
Cow position:
Alignm length: 513
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 24

Conread position: 190-685
Cow position:
Alignm length: 513
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 29

Conread position: 190-685
Cow position:
Alignm length: 513
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 29

Conread position: 202-686
Cow position:
Alignm length: 504
Alignm identity: 321
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 65, 80

Conread position: 207-685
Cow position:
Alignm length: 499
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 13

Conread position: 210-492
Cow position:
Alignm length: 294
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 154

Conread position: 210-648
Cow position:
Alignm length: 453
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 158

Conread position: 214-685
Cow position:
Alignm length: 491
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 24

Conread position: 215-685
Cow position:
Alignm length: 494
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 74

Conread position: 215-685
Cow position:
Alignm length: 492
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 153

Conread position: 215-685
Cow position:
Alignm length: 493
Alignm identity: 311
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 83

Conread position: 217-731
Cow position:
Alignm length: 535
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 147

Conread position: 224-452
Cow position:
Alignm length: 235
Alignm identity: 176
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 91, 140

Conread position: 224-685
Cow position:
Alignm length: 482
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 140

Conread position: 226-683
Cow position:
Alignm length: 467
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 136

Conread position: 228-633
Cow position:
Alignm length: 424
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 329

Conread position: 229-594
Cow position:
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 140

Conread position: 233-685
Cow position:
Alignm length: 466
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 126

Conread position: 234-686
Cow position:
Alignm length: 466
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 9

Conread position: 236-426
Cow position:
Alignm length: 197
Alignm identity: 157
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 81, 37

Conread position: 238-685
Cow position:
Alignm length: 467
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 126

Conread position: 243-671
Cow position:
Alignm length: 450
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 121

Conread position: 248-686
Cow position:
Alignm length: 455
Alignm identity: 291
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 69, 34

Conread position: 257-695
Cow position:
Alignm length: 457
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 107

Conread position: 261-685
Cow position:
Alignm length: 442
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 103

Conread position: 261-774
Cow position:
Alignm length: 534
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 99

Conread position: 265-685
Cow position:
Alignm length: 440
Alignm identity: 293
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 6, 100

Conread position: 266-685
Cow position:
Alignm length: 440
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 54

Conread position: 269-648
Cow position:
Alignm length: 404
Alignm identity: 281
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 31, 107

Conread position: 272-685
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 94

Conread position: 283-465
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 81

Conread position: 288-694
Cow position:
Alignm length: 421
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 57

Conread position: 289-574
Cow position:
Alignm length: 301
Alignm identity: 215
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 26, 73

Conread position: 291-685
Cow position:
Alignm length: 409
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 51

Conread position: 313-463
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 133, 37

Conread position: 313-670
Cow position:
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 49

Conread position: 313-670
Cow position:
Alignm length: 368
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 45

Conread position: 313-685
Cow position:
Alignm length: 381
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 45

Conread position: 313-685
Cow position:
Alignm length: 384
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 45

Conread position: 313-686
Cow position:
Alignm length: 383
Alignm identity: 247
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 51

Conread position: 313-728
Cow position:
Alignm length: 430
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 249

Conread position: 314-685
Cow position:
Alignm length: 383
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 44

Conread position: 322-685
Cow position:
Alignm length: 379
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 39

Conread position: 326-564
Cow position:
Alignm length: 249
Alignm identity: 169
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 131, 32

Conread position: 327-668
Cow position:
Alignm length: 351
Alignm identity: 230
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 136, 31

Conread position: 327-686
Cow position:
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 32

Conread position: 328-685
Cow position:
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 333-685
Cow position:
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 25

Conread position: 334-686
Cow position:
Alignm length: 366
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 24

Conread position: 341-595
Cow position:
Alignm length: 266
Alignm identity: 196
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 121, 17

Conread position: 341-774
Cow position:
Alignm length: 442
Alignm identity: 292
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 157, 17

Conread position: 345-685
Cow position:
Alignm length: 344
Alignm identity: 240
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 139, 13

Conread position: 347-687
Cow position:
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 16

Conread position: 355-683
Cow position:
Alignm length: 339
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 122

Conread position: 358-767
Cow position:
Alignm length: 435
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 296

Conread position: 359-574
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 119, 102

Conread position: 361-685
Cow position:
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 316

Conread position: 367-690
Cow position:
Alignm length: 337
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 95, 319

Conread position: 371-684
Cow position:
Alignm length: 331
Alignm identity: 234
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 76, 312

Conread position: 378-682
Cow position:
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 152

Conread position: 378-685
Cow position:
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 298

Conread position: 383-685
Cow position:
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 195

Conread position: 383-685
Cow position:
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 294

Conread position: 384-684
Cow position:
Alignm length: 312
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 67

Conread position: 385-611
Cow position:
Alignm length: 237
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 76, 86

Conread position: 390-632
Cow position:
Alignm length: 252
Alignm identity: 179
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 70, 129

Conread position: 391-685
Cow position:
Alignm length: 311
Alignm identity: 224
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 71, 175

Conread position: 392-685
Cow position:
Alignm length: 313
Alignm identity: 225
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 61, 159

Conread position: 392-685
Cow position:
Alignm length: 313
Alignm identity: 225
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 61, 159

Conread position: 395-685
Cow position:
Alignm length: 300
Alignm identity: 200
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 67, 27

Conread position: 403-685
Cow position:
Alignm length: 289
Alignm identity: 210
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 92, 48

Conread position: 406-685
Cow position:
Alignm length: 291
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 150

Conread position: 406-774
Cow position:
Alignm length: 385
Alignm identity: 265
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 67, 91

Conread position: 410-686
Cow position:
Alignm length: 291
Alignm identity: 210
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 64, 180

Conread position: 419-685
Cow position:
Alignm length: 279
Alignm identity: 206
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 54, 259

Conread position: 423-673
Cow position:
Alignm length: 260
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 423-685
Cow position:
Alignm length: 275
Alignm identity: 196
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 18

Conread position: 427-685
Cow position:
Alignm length: 275
Alignm identity: 203
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 35, 103

Conread position: 427-774
Cow position:
Alignm length: 364
Alignm identity: 237
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 54

Conread position: 440-677
Cow position:
Alignm length: 247
Alignm identity: 175
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 54, 35

Conread position: 442-685
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 35

Conread position: 458-685
Cow position:
Alignm length: 235
Alignm identity: 171
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 37, 13

Conread position: 462-725
Cow position:
Alignm length: 283
Alignm identity: 205
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 36, 9

Conread position: 462-781
Cow position:
Alignm length: 330
Alignm identity: 227
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 35, 9

Conread position: 469-685
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 92

Conread position: 473-677
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 27, 70

Conread position: 475-626
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 475-685
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 197

Conread position: 475-685
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 15, 197

Conread position: 475-685
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 202

Conread position: 477-774
Cow position:
Alignm length: 307
Alignm identity: 208
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 73

Conread position: 503-685
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 163

Conread position: 505-685
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 48, 155

Conread position: 505-685
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 48, 163

Conread position: 506-685
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 160

Conread position: 506-685
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 47, 34

Conread position: 506-685
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 47, 159

Conread position: 507-685
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 133

Conread position: 508-685
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 45, 159

Conread position: 510-685
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 118, 0

Conread position: 512-685
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 44, 155

Conread position: 517-685
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 20

Conread position: 524-684
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 17

Conread position: 524-684
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 29, 20

Conread position: 524-685
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 143

Conread position: 526-685
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 141

Conread position: 528-728
Cow position:
Alignm length: 218
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 548-685
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 119

Conread position: 552-711
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 135, 114

Conread position: 556-728
Cow position:
Alignm length: 174
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 105, 120

Conread position: 558-685
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 108

Conread position: 732-842
Cow position:
Alignm length: 120
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Show alignments to all cow chromosomes.