Cow genome map

Conread name: Ss1.1-Tra1-TCH01C070097.5

Conread position: 1-495
Cow position: chr28:5771778-5772279 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 29

Conread position: 4-306
Cow position: chr28:16596899-16597205 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 205
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 18, 76

Conread position: 7-685
Cow position: chr28:15428222-15428920 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 96

Conread position: 9-448
Cow position: chr28:32303385-32302929 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 101

Conread position: 13-299
Cow position: chr28:2663908-2663618 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 193
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 147

Conread position: 14-458
Cow position: chr28:27935321-27934886 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 288
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 133, 35

Conread position: 17-610
Cow position: chr28:11544912-11544304 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 18

Conread position: 17-774
Cow position: chr28:957449-958215 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 42

Conread position: 18-685
Cow position: chr28:5210681-5211373 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 212

Conread position: 18-706
Cow position: chr28:9443694-9442991 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 130

Conread position: 19-292
Cow position: chr28:1774382-1774666 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 36, 91

Conread position: 19-302
Cow position: chr28:8718412-8718119 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 217

Conread position: 19-315
Cow position: chr28:29760069-29759786 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 23, 62

Conread position: 19-521
Cow position: chr28:23024742-23025261 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 212

Conread position: 19-665
Cow position: chr28:3645011-3645676 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 144

Conread position: 19-681
Cow position: chr28:24591433-24592119 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 217

Conread position: 19-684
Cow position: chr28:34596806-34597494 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 212

Conread position: 19-685
Cow position: chr28:14491920-14492571 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 59

Conread position: 19-685
Cow position: chr28:15917964-15917274 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 100

Conread position: 19-685
Cow position: chr28:21362080-21362763 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 84

Conread position: 19-685
Cow position: chr28:22230769-22230081 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 211

Conread position: 19-685
Cow position: chr28:25595469-25596154 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 156

Conread position: 19-685
Cow position: chr28:29436213-29435550 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 61

Conread position: 19-685
Cow position: chr28:34582483-34583175 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 212

Conread position: 21-576
Cow position: chr28:12227997-12227441 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 41

Conread position: 22-685
Cow position: chr28:6536235-6535547 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 210

Conread position: 22-685
Cow position: chr28:10302401-10303089 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 210

Conread position: 22-685
Cow position: chr28:24621279-24620612 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 209

Conread position: 22-685
Cow position: chr28:25702345-25701686 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 157

Conread position: 23-670
Cow position: chr28:31849355-31848698 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 22

Conread position: 24-685
Cow position: chr28:25827531-25826867 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 20

Conread position: 25-685
Cow position: chr28:15604184-15604868 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 34

Conread position: 25-686
Cow position: chr28:5824403-5825101 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 90

Conread position: 26-314
Cow position: chr28:25164170-25164460 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 18

Conread position: 31-371
Cow position: chr28:15714132-15714490 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 191

Conread position: 31-682
Cow position: chr28:15352541-15351875 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 16

Conread position: 34-663
Cow position: chr28:4958922-4958274 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 182

Conread position: 35-560
Cow position: chr28:25563001-25563535 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 114

Conread position: 35-638
Cow position: chr28:15675438-15676067 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 24

Conread position: 35-685
Cow position: chr28:1025753-1025082 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 195

Conread position: 35-685
Cow position: chr28:17600405-17599742 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 126

Conread position: 36-685
Cow position: chr28:25026454-25027125 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 156

Conread position: 40-683
Cow position: chr28:10576419-10575776 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 16

Conread position: 49-314
Cow position: chr28:17603806-17603537 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 24, 10

Conread position: 49-314
Cow position: chr28:22579330-22579597 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 154

Conread position: 49-602
Cow position: chr28:4044826-4045389 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 29

Conread position: 50-744
Cow position: chr28:24498639-24499355 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 182

Conread position: 54-373
Cow position: chr28:7743738-7744070 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 175

Conread position: 54-530
Cow position: chr28:25167555-25167085 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 333
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 19, 106

Conread position: 54-685
Cow position: chr28:15033482-15032827 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 175

Conread position: 54-685
Cow position: chr28:26420403-26419750 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 174

Conread position: 54-685
Cow position: chr28:32786826-32786176 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 176

Conread position: 58-783
Cow position: chr28:6474643-6473895 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 52

Conread position: 59-420
Cow position: chr28:10161527-10161893 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 19

Conread position: 59-685
Cow position: chr28:6231084-6230443 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 169

Conread position: 59-685
Cow position: chr28:21568508-21569144 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 138

Conread position: 60-460
Cow position: chr28:17188980-17189383 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 13, 170

Conread position: 61-285
Cow position: chr28:23800228-23800449 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 12, 50

Conread position: 61-449
Cow position: chr28:15575682-15576065 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 85

Conread position: 61-490
Cow position: chr28:34408913-34408468 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 167

Conread position: 61-731
Cow position: chr28:10599284-10599957 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 129

Conread position: 62-456
Cow position: chr28:21323708-21324091 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 22

Conread position: 63-660
Cow position: chr28:15588691-15589296 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 51

Conread position: 69-492
Cow position: chr28:10643867-10643437 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 42

Conread position: 69-595
Cow position: chr28:12936794-12936248 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 150

Conread position: 72-267
Cow position: chr28:25849012-25848812 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 153

Conread position: 72-305
Cow position: chr28:3013324-3013085 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 154

Conread position: 72-314
Cow position: chr28:24670203-24670456 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 159

Conread position: 72-432
Cow position: chr28:14891571-14891940 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-445
Cow position: chr28:14110689-14111072 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-448
Cow position: chr28:20407347-20407716 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 262
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 14, 140

Conread position: 72-494
Cow position: chr28:22040790-22040355 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-536
Cow position: chr28:15686025-15686496 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 29

Conread position: 72-554
Cow position: chr28:14505441-14505930 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 300
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 34

Conread position: 72-663
Cow position: chr28:7021994-7021389 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 35

Conread position: 72-671
Cow position: chr28:30920585-30920006 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 85

Conread position: 72-678
Cow position: chr28:24734159-24734784 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 401
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 15, 40

Conread position: 72-684
Cow position: chr28:10771711-10772333 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 136

Conread position: 72-684
Cow position: chr28:30097496-30098128 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 153

Conread position: 72-685
Cow position: chr28:444026-444659 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 147

Conread position: 72-685
Cow position: chr28:483089-482457 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 132

Conread position: 72-685
Cow position: chr28:785284-785918 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 153

Conread position: 72-685
Cow position: chr28:1955987-1956620 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr28:2644337-2644966 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 139

Conread position: 72-685
Cow position: chr28:3626660-3627264 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 87

Conread position: 72-685
Cow position: chr28:5112100-5111470 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 153

Conread position: 72-685
Cow position: chr28:5940103-5940737 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 154

Conread position: 72-685
Cow position: chr28:6477838-6478468 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 41

Conread position: 72-685
Cow position: chr28:6777386-6776752 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 119

Conread position: 72-685
Cow position: chr28:7335607-7336234 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr28:7829128-7829757 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 27

Conread position: 72-685
Cow position: chr28:9181493-9182120 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 87

Conread position: 72-685
Cow position: chr28:10294422-10295057 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 93

Conread position: 72-685
Cow position: chr28:12217669-12217038 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 60

Conread position: 72-685
Cow position: chr28:16180994-16181619 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 152

Conread position: 72-685
Cow position: chr28:23310695-23310085 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr28:24885479-24886111 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 72-685
Cow position: chr28:28470641-28471276 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 41

Conread position: 72-685
Cow position: chr28:28928451-28929084 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 156

Conread position: 72-686
Cow position: chr28:26924013-26923377 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 153

Conread position: 72-728
Cow position: chr28:24302715-24302056 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 144

Conread position: 73-364
Cow position: chr28:10579244-10578940 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 74, 151

Conread position: 73-685
Cow position: chr28:23674442-23675065 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 152

Conread position: 74-461
Cow position: chr28:8381668-8382064 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-565
Cow position: chr28:12407592-12407082 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 150

Conread position: 74-640
Cow position: chr28:1165264-1164684 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-641
Cow position: chr28:5568994-5569572 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 52

Conread position: 74-685
Cow position: chr28:1215209-1214579 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr28:1507497-1508127 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr28:5749082-5748455 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 35

Conread position: 74-685
Cow position: chr28:13462585-13463214 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 145

Conread position: 74-685
Cow position: chr28:17391036-17391684 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr28:18517523-18516895 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr28:20935793-20935161 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 151

Conread position: 74-685
Cow position: chr28:29037023-29036401 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr28:29822809-29823437 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr28:30534440-30533806 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-685
Cow position: chr28:33254944-33255572 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 34

Conread position: 74-685
Cow position: chr28:33639191-33639821 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-686
Cow position: chr28:3004891-3004267 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 90

Conread position: 74-686
Cow position: chr28:6958854-6959481 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 74-694
Cow position: chr28:28441374-28441995 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 29

Conread position: 75-433
Cow position: chr28:24561555-24561930 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 259
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 8, 86

Conread position: 75-673
Cow position: chr28:9713969-9713360 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 384
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 221

Conread position: 77-774
Cow position: chr28:14511072-14511782 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 121

Conread position: 78-262
Cow position: chr28:12171171-12170986 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 79, 62

Conread position: 78-685
Cow position: chr28:32731351-32730762 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 77

Conread position: 79-638
Cow position: chr28:11502601-11502011 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 8

Conread position: 82-578
Cow position: chr28:8787726-8788229 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 333
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 77, 138

Conread position: 84-305
Cow position: chr28:10472281-10472506 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 63, 130

Conread position: 84-685
Cow position: chr28:28358152-28357533 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 140

Conread position: 85-685
Cow position: chr28:5636683-5637301 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 139

Conread position: 85-685
Cow position: chr28:5816285-5816895 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 18

Conread position: 86-491
Cow position: chr28:34083907-34083499 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 29

Conread position: 86-657
Cow position: chr28:1812326-1811741 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 138

Conread position: 89-685
Cow position: chr28:6472801-6472188 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 135

Conread position: 89-686
Cow position: chr28:10458449-10457831 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 34

Conread position: 93-685
Cow position: chr28:2088208-2088826 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 136

Conread position: 93-685
Cow position: chr28:17664327-17663698 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 132

Conread position: 98-685
Cow position: chr28:22255549-22254947 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 84

Conread position: 99-401
Cow position: chr28:3461159-3461460 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 216, 74

Conread position: 100-435
Cow position: chr28:21105457-21105112 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 125

Conread position: 102-314
Cow position: chr28:10591274-10591057 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 18, 123

Conread position: 103-665
Cow position: chr28:7813327-7813901 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 124

Conread position: 111-685
Cow position: chr28:12154501-12155092 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 113

Conread position: 112-686
Cow position: chr28:1196773-1197380 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 112

Conread position: 127-685
Cow position: chr28:7907870-7907295 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 102

Conread position: 128-685
Cow position: chr28:30960231-30960798 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 95

Conread position: 132-645
Cow position: chr28:1836439-1836956 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 92

Conread position: 157-574
Cow position: chr28:5337151-5336717 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 63

Conread position: 157-685
Cow position: chr28:5791799-5791260 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 26

Conread position: 159-684
Cow position: chr28:7654908-7654374 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 61

Conread position: 162-670
Cow position: chr28:12176622-12177132 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 321
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 124, 11

Conread position: 162-686
Cow position: chr28:15003978-15004517 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 58

Conread position: 163-660
Cow position: chr28:3189317-3188805 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 57

Conread position: 164-685
Cow position: chr28:4457053-4457583 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 38

Conread position: 170-686
Cow position: chr28:25069554-25070099 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 50

Conread position: 173-685
Cow position: chr28:20967944-20967418 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 46

Conread position: 181-728
Cow position: chr28:23794823-23794263 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 34

Conread position: 182-685
Cow position: chr28:13880257-13880770 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 37

Conread position: 184-451
Cow position: chr28:2122408-2122674 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 127, 14

Conread position: 184-774
Cow position: chr28:12649966-12650573 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 35

Conread position: 189-423
Cow position: chr28:5767640-5767879 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 123, 30

Conread position: 190-685
Cow position: chr28:7004769-7005278 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 32

Conread position: 190-685
Cow position: chr28:21896037-21896533 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 29

Conread position: 192-461
Cow position: chr28:24488880-24489145 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 27

Conread position: 196-686
Cow position: chr28:3744725-3745215 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 23

Conread position: 198-685
Cow position: chr28:34678445-34677946 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 167

Conread position: 205-685
Cow position: chr28:14665907-14666396 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 19

Conread position: 210-450
Cow position: chr28:27956974-27956724 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 141

Conread position: 210-725
Cow position: chr28:5571397-5571951 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 65

Conread position: 213-686
Cow position: chr28:30368721-30369186 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 321
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 109

Conread position: 215-684
Cow position: chr28:12700414-12700894 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 314
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 99, 263

Conread position: 215-685
Cow position: chr28:4929684-4929199 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 149

Conread position: 215-685
Cow position: chr28:10325837-10326308 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 61

Conread position: 221-694
Cow position: chr28:526132-526594 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 307
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 212, 101

Conread position: 224-574
Cow position: chr28:21629475-21629821 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 232
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 268, 97

Conread position: 224-686
Cow position: chr28:22553310-22553776 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 304
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 65, 107

Conread position: 226-683
Cow position: chr28:20410539-20410992 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 47

Conread position: 231-433
Cow position: chr28:34879631-34879842 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 57, 143

Conread position: 233-560
Cow position: chr28:1384679-1384348 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 65, 21

Conread position: 235-639
Cow position: chr28:25761683-25762090 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 134

Conread position: 240-685
Cow position: chr28:3067682-3068138 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 103

Conread position: 243-685
Cow position: chr28:30305215-30304759 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 63

Conread position: 243-685
Cow position: chr28:30966008-30966456 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 304
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 71, 121

Conread position: 243-686
Cow position: chr28:10480082-10479638 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 306
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 31, 128

Conread position: 249-685
Cow position: chr28:13606247-13606683 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 29

Conread position: 249-781
Cow position: chr28:10279654-10280202 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 115

Conread position: 261-565
Cow position: chr28:12170768-12170450 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 98

Conread position: 264-781
Cow position: chr28:16041838-16041305 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 101

Conread position: 265-685
Cow position: chr28:21379319-21379746 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 107

Conread position: 272-684
Cow position: chr28:12997507-12997927 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 94

Conread position: 276-620
Cow position: chr28:34606426-34606777 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 242
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 86

Conread position: 276-685
Cow position: chr28:12952036-12952445 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 286
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 39, 88

Conread position: 286-685
Cow position: chr28:7443632-7443218 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 78

Conread position: 308-685
Cow position: chr28:15600869-15600486 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 55

Conread position: 313-575
Cow position: chr28:7547606-7547877 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 140, 50

Conread position: 313-685
Cow position: chr28:4213763-4214143 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 50

Conread position: 313-685
Cow position: chr28:17603154-17602792 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 45

Conread position: 313-685
Cow position: chr28:25849431-25849812 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 50

Conread position: 313-685
Cow position: chr28:28935093-28934712 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 45

Conread position: 314-640
Cow position: chr28:5867356-5867682 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 222
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 162, 44

Conread position: 316-685
Cow position: chr28:2663084-2662709 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 33

Conread position: 316-685
Cow position: chr28:8718079-8717702 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 47

Conread position: 317-561
Cow position: chr28:13373923-13373676 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 189
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 52, 138

Conread position: 321-665
Cow position: chr28:23915959-23916309 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 228
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 161, 37

Conread position: 324-670
Cow position: chr28:3652128-3652474 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 34

Conread position: 324-685
Cow position: chr28:6046678-6047047 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 34

Conread position: 324-685
Cow position: chr28:28184266-28184642 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 44

Conread position: 327-685
Cow position: chr28:23619852-23620214 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 31

Conread position: 327-685
Cow position: chr28:24670678-24671044 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 36

Conread position: 328-574
Cow position: chr28:4376503-4376244 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 30

Conread position: 328-639
Cow position: chr28:16543933-16543624 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 213
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 166, 30

Conread position: 334-548
Cow position: chr28:25796637-25796410 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 112, 24

Conread position: 334-645
Cow position: chr28:12047646-12047333 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 5, 25

Conread position: 335-685
Cow position: chr28:5311866-5312225 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 23

Conread position: 338-685
Cow position: chr28:34730629-34730983 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 24

Conread position: 339-685
Cow position: chr28:2429125-2428767 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 239
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 137, 14

Conread position: 341-663
Cow position: chr28:32343561-32343887 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 121, 17

Conread position: 347-685
Cow position: chr28:15054064-15054407 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 11

Conread position: 347-685
Cow position: chr28:17368993-17369331 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 11

Conread position: 384-685
Cow position: chr28:19834047-19834365 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 300

Conread position: 390-685
Cow position: chr28:601227-600933 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 72, 51

Conread position: 391-685
Cow position: chr28:980317-980013 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 69, 155

Conread position: 392-685
Cow position: chr28:7059178-7059481 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 285

Conread position: 393-685
Cow position: chr28:22200915-22201206 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 79, 203

Conread position: 398-685
Cow position: chr28:14149949-14150239 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 56, 82

Conread position: 409-685
Cow position: chr28:21768328-21768042 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 65, 268

Conread position: 410-665
Cow position: chr28:13522653-13522917 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 415-685
Cow position: chr28:10162217-10162481 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 84, 39

Conread position: 416-685
Cow position: chr28:7744075-7744348 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 47, 235

Conread position: 421-639
Cow position: chr28:34880112-34880343 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 41, 173

Conread position: 424-685
Cow position: chr28:1777545-1777812 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 7

Conread position: 425-685
Cow position: chr28:17745345-17745084 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 29, 50

Conread position: 427-686
Cow position: chr28:9288410-9288141 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 48, 250

Conread position: 432-685
Cow position: chr28:17031102-17030844 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 35, 142

Conread position: 441-685
Cow position: chr28:13323130-13323384 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 21, 236

Conread position: 442-685
Cow position: chr28:10194601-10194354 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 52, 33

Conread position: 450-635
Cow position: chr28:31068621-31068812 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 477-685
Cow position: chr28:34649408-34649623 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 23, 135

Conread position: 477-725
Cow position: chr28:20407942-20408203 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 135

Conread position: 478-685
Cow position: chr28:7685897-7685685 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 14, 193

Conread position: 479-685
Cow position: chr28:1198241-1198446 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 187, 0

Conread position: 483-684
Cow position: chr28:5772472-5772668 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 32

Conread position: 488-641
Cow position: chr28:30249440-30249285 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 500-685
Cow position: chr28:15576957-15577141 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 53, 131

Conread position: 505-685
Cow position: chr28:21104900-21104718 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 48, 164

Conread position: 505-685
Cow position: chr28:23839091-23839271 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 48, 170

Conread position: 505-685
Cow position: chr28:30870151-30870323 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 505-685
Cow position: chr28:32301516-32301330 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 167

Conread position: 506-804
Cow position: chr28:7888940-7888633 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 178
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 511-685
Cow position: chr28:6319872-6320045 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 155, 0

Conread position: 515-685
Cow position: chr28:331819-331649 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 150

Conread position: 524-685
Cow position: chr28:30329043-30328893 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 526-686
Cow position: chr28:16597242-16597402 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 140

Conread position: 539-686
Cow position: chr28:23025479-23025626 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 127

Conread position: 541-685
Cow position: chr28:1384348-1384204 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 126

Conread position: 548-685
Cow position: chr28:10643409-10643275 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 5, 107

Conread position: 552-685
Cow position: chr28:8971196-8971328 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 552-685
Cow position: chr28:10473086-10473218 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 552-685
Cow position: chr28:24992606-24992738 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 572-684
Cow position: chr28:12166360-12166249 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 732-839
Cow position: chr28:22201326-22201439 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 732-842
Cow position: chr28:13864925-13865045 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 734-842
Cow position: chr28:30328549-30328435 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Show alignments to all cow chromosomes.