Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01C100081.5 |
| Conread position: | 1-1293 |
| Cow position: | chr5:27944539-27945833 (view UCSC Genome Browser custom track) |
| Alignm length: | 1297 |
| Alignm identity: | 1157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1185, 1077 |
| Conread position: | 88-190 |
| Cow position: | chr5:60634335-60634233 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 188-296 |
| Cow position: | chr5:60634144-60634036 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 296-387 |
| Cow position: | chr5:60633918-60633827 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-502 |
| Cow position: | chr5:60633723-60633607 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 500-584 |
| Cow position: | chr5:60633517-60633433 (view UCSC Genome Browser custom track) |
| Alignm length: | 85 |
| Alignm identity: | 82 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 584-737 |
| Cow position: | chr5:60633254-60633101 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 146 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 721-816 |
| Cow position: | chr5:60633030-60632936 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 816-901 |
| Cow position: | chr5:60632838-60632753 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 79 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 896-1000 |
| Cow position: | chr5:60632673-60632569 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 992-1271 |
| Cow position: | chr5:60632475-60632208 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 78 |
Show alignments to all cow chromosomes.