Cow genome map

Conread name: Ss1.1-Tra1-TCH01D020047.5

Conread position: 1-114
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 1-135
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-143
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 1-144
Cow position:
Alignm length: 144
Alignm identity: 117
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-147
Cow position:
Alignm length: 147
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-148
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 82

Conread position: 1-148
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 1-148
Cow position:
Alignm length: 151
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 43, 39

Conread position: 1-148
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 1-148
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 114, 109

Conread position: 1-150
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 117, 138

Conread position: 1-150
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 139

Conread position: 1-150
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 114, 65

Conread position: 1-150
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 1-150
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 137, 130

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 96, 0

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 1-151
Cow position:
Alignm length: 155
Alignm identity: 126
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 56, 119

Conread position: 1-152
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 80, 64

Conread position: 1-152
Cow position:
Alignm length: 154
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 1-152
Cow position:
Alignm length: 154
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 113, 76

Conread position: 1-153
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 120, 0

Conread position: 1-153
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 1-153
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 112, 89

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 116, 74

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 41

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 14, 60

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 112, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-158
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 108, 34

Conread position: 1-158
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 36

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 1-159
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 54, 40

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 126, 0

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 1-159
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 118, 19

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 126
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 108, 0

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 127
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1-159
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 116, 0

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 1-159
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 43, 39

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 1-159
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 17

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 114, 0

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 116, 144

Conread position: 1-159
Cow position:
Alignm length: 165
Alignm identity: 130
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 115, 0

Conread position: 1-160
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 119, 89

Conread position: 1-161
Cow position:
Alignm length: 162
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 112, 18

Conread position: 1-164
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 118, 160

Conread position: 1-166
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 29, 23

Conread position: 1-166
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 112

Conread position: 1-166
Cow position:
Alignm length: 176
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 1-166
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 1-169
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 80, 52

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 117, 155

Conread position: 1-169
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 127, 0

Conread position: 1-169
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 133
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 135
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 154, 0

Conread position: 1-170
Cow position:
Alignm length: 173
Alignm identity: 136
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 118, 156

Conread position: 1-170
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 119, 154

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 68, 97

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 113, 38

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 154, 0

Conread position: 1-170
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 109

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 28

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 110, 0

Conread position: 1-170
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 156

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 1-170
Cow position:
Alignm length: 175
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 114, 5

Conread position: 1-170
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 39

Conread position: 1-170
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 119, 38

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 154, 0

Conread position: 1-170
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 115, 158

Conread position: 1-170
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 163

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 118, 137

Conread position: 1-171
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 104, 144

Conread position: 1-171
Cow position:
Alignm length: 177
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 1-171
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 110, 56

Conread position: 1-171
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 1-171
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 111, 0

Conread position: 1-192
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 114, 109

Conread position: 1-198
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 157

Conread position: 1-198
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 157

Conread position: 2-127
Cow position:
Alignm length: 126
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-153
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 107, 90

Conread position: 2-153
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 114, 39

Conread position: 2-155
Cow position:
Alignm length: 156
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 117, 110

Conread position: 2-164
Cow position:
Alignm length: 169
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 2-166
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 55, 81

Conread position: 2-170
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 111, 126

Conread position: 2-171
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 118, 0

Conread position: 2-171
Cow position:
Alignm length: 174
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 2-172
Cow position:
Alignm length: 171
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 2-184
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 113, 93

Conread position: 3-150
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 3-151
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 3-159
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 3-160
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 127, 72

Conread position: 3-170
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 127

Conread position: 5-168
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 75, 122

Conread position: 5-171
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 6-165
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 143

Conread position: 6-170
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 69, 11

Conread position: 8-159
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 138, 102

Conread position: 9-159
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 9-171
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 10-147
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 130

Conread position: 10-170
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 10, 101

Conread position: 10-170
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 13-150
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 19-156
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 37-159
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Show alignments to all cow chromosomes.