Cow genome map

Conread name: Ss1.1-Tra1-TCH01D020047.5

Conread position: 1-108
Cow position:
Alignm length: 108
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-117
Cow position:
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 1-128
Cow position:
Alignm length: 128
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-128
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 1-147
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 1-148
Cow position:
Alignm length: 148
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-148
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 1-148
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 113, 139

Conread position: 1-148
Cow position:
Alignm length: 150
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 1-150
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 1-150
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 1-151
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 111, 130

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-151
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 1-151
Cow position:
Alignm length: 154
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-152
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 17

Conread position: 1-152
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 115, 0

Conread position: 1-153
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 106, 124

Conread position: 1-153
Cow position:
Alignm length: 156
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 117, 66

Conread position: 1-153
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 113

Conread position: 1-155
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 113, 0

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 116, 71

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 16, 20

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 111, 52

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 1-159
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 1-159
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 1-159
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 1-159
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 114, 56

Conread position: 1-159
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 106, 0

Conread position: 1-159
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-159
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 45, 40

Conread position: 1-160
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 105, 54

Conread position: 1-160
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 109, 53

Conread position: 1-160
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 52

Conread position: 1-160
Cow position:
Alignm length: 160
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 1-160
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 63

Conread position: 1-164
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 116, 156

Conread position: 1-164
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 119, 54

Conread position: 1-166
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 66

Conread position: 1-166
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 1-169
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 117, 40

Conread position: 1-169
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 25, 117

Conread position: 1-169
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 1-169
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 1-169
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 28, 163

Conread position: 1-169
Cow position:
Alignm length: 174
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 81, 159

Conread position: 1-169
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 118, 0

Conread position: 1-170
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 105, 26

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 134
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 152, 0

Conread position: 1-170
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 111, 48

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 1-170
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 104, 159

Conread position: 1-170
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 108, 74

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 93, 110

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 116, 153

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 112, 0

Conread position: 1-170
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 84, 19

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 79, 48

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 1-170
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 115, 149

Conread position: 1-171
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 119, 0

Conread position: 1-171
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 114, 74

Conread position: 1-171
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 108, 48

Conread position: 1-171
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 88, 82

Conread position: 1-171
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 115, 156

Conread position: 1-171
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 44, 123

Conread position: 1-171
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 98, 57

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 1-171
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 114, 59

Conread position: 1-171
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 127

Conread position: 1-171
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 116, 0

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 1-172
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 108, 57

Conread position: 1-172
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 1-185
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 120, 111

Conread position: 2-150
Cow position:
Alignm length: 149
Alignm identity: 123
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 2-151
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 114, 127

Conread position: 2-170
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 115, 94

Conread position: 2-170
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 105, 45

Conread position: 2-171
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-178
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 90, 96

Conread position: 3-159
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 111, 124

Conread position: 3-170
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 119, 24

Conread position: 3-171
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 4-150
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 139, 15

Conread position: 4-151
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 5-147
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 5-171
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 6-153
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 6-170
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 106, 46

Conread position: 8-170
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 8-170
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 44

Conread position: 9-150
Cow position:
Alignm length: 142
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 9-171
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 10-129
Cow position:
Alignm length: 122
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 12-159
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 98, 36

Conread position: 19-171
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 22-143
Cow position:
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 22-153
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 22-166
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 129

Conread position: 23-170
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 37-171
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 120

Conread position: 180-828
Cow position:
Alignm length: 668
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 65

Show alignments to all cow chromosomes.