Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01D020047.5 |
| Conread position: | 1-142 |
| Cow position: | chr21:30157656-30157802 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1-144 |
| Cow position: | chr21:23460282-23460145 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-146 |
| Cow position: | chr21:41287644-41287792 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 1-149 |
| Cow position: | chr21:8545874-8546018 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 117, 66 |
| Conread position: | 1-149 |
| Cow position: | chr21:40192155-40192301 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-150 |
| Cow position: | chr21:13588909-13588761 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 108, 57 |
| Conread position: | 1-150 |
| Cow position: | chr21:17642836-17642985 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 112, 34 |
| Conread position: | 1-150 |
| Cow position: | chr21:18779827-18779972 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 119, 74 |
| Conread position: | 1-150 |
| Cow position: | chr21:26245063-26244917 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 1-150 |
| Cow position: | chr21:41878618-41878470 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 114, 23 |
| Conread position: | 1-152 |
| Cow position: | chr21:47189-47035 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1-152 |
| Cow position: | chr21:3763594-3763742 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-152 |
| Cow position: | chr21:17193600-17193756 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1-153 |
| Cow position: | chr21:1764720-1764868 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 41 |
| Conread position: | 1-153 |
| Cow position: | chr21:3360866-3361017 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 42, 75 |
| Conread position: | 1-153 |
| Cow position: | chr21:13738701-13738558 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1-153 |
| Cow position: | chr21:42841448-42841604 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 39 |
| Conread position: | 1-156 |
| Cow position: | chr21:471823-471670 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:7768587-7768427 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:10538106-10538259 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:26647866-26648018 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 117, 54 |
| Conread position: | 1-156 |
| Cow position: | chr21:29405072-29405222 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:41597960-41597814 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:42413948-42414108 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:45473609-45473761 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:47763969-47764122 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-158 |
| Cow position: | chr21:33791232-33791375 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-159 |
| Cow position: | chr21:1591703-1591542 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1-159 |
| Cow position: | chr21:3585219-3585377 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 112, 139 |
| Conread position: | 1-159 |
| Cow position: | chr21:15911549-15911390 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 109, 51 |
| Conread position: | 1-159 |
| Cow position: | chr21:21907285-21907439 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 112, 54 |
| Conread position: | 1-159 |
| Cow position: | chr21:28733764-28733924 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 106, 71 |
| Conread position: | 1-159 |
| Cow position: | chr21:28924258-28924100 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-159 |
| Cow position: | chr21:32339591-32339747 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1-159 |
| Cow position: | chr21:36910080-36909925 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-159 |
| Cow position: | chr21:38449300-38449457 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 115, 47 |
| Conread position: | 1-159 |
| Cow position: | chr21:40432594-40432440 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1-159 |
| Cow position: | chr21:42007313-42007473 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 108, 76 |
| Conread position: | 1-159 |
| Cow position: | chr21:45920909-45921068 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 1-160 |
| Cow position: | chr21:44565573-44565731 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 117, 40 |
| Conread position: | 1-161 |
| Cow position: | chr21:10633491-10633652 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 106, 51 |
| Conread position: | 1-166 |
| Cow position: | chr21:5898253-5898416 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 111, 59 |
| Conread position: | 1-166 |
| Cow position: | chr21:8206919-8206751 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 1-166 |
| Cow position: | chr21:10410371-10410203 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 105, 40 |
| Conread position: | 1-166 |
| Cow position: | chr21:15544080-15544235 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-166 |
| Cow position: | chr21:37706266-37706436 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 117, 140 |
| Conread position: | 1-166 |
| Cow position: | chr21:40266270-40266107 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 105, 58 |
| Conread position: | 1-166 |
| Cow position: | chr21:46848979-46849144 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 110, 59 |
| Conread position: | 1-168 |
| Cow position: | chr21:23321929-23322097 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 1-169 |
| Cow position: | chr21:13584912-13585074 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-170 |
| Cow position: | chr21:33868-33702 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 1-170 |
| Cow position: | chr21:396016-395851 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-170 |
| Cow position: | chr21:957821-957653 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 115, 59 |
| Conread position: | 1-170 |
| Cow position: | chr21:976999-977164 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 1-170 |
| Cow position: | chr21:6051652-6051488 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 43, 39 |
| Conread position: | 1-170 |
| Cow position: | chr21:6998096-6997921 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 63, 164 |
| Conread position: | 1-170 |
| Cow position: | chr21:9416400-9416229 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 44, 158 |
| Conread position: | 1-170 |
| Cow position: | chr21:13365491-13365319 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 106, 60 |
| Conread position: | 1-170 |
| Cow position: | chr21:14452383-14452217 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 104, 132 |
| Conread position: | 1-170 |
| Cow position: | chr21:15976781-15976614 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 118, 21 |
| Conread position: | 1-170 |
| Cow position: | chr21:17184066-17183904 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-170 |
| Cow position: | chr21:17890451-17890284 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 117, 131 |
| Conread position: | 1-170 |
| Cow position: | chr21:20418533-20418703 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 115, 157 |
| Conread position: | 1-170 |
| Cow position: | chr21:22210097-22210263 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 1-170 |
| Cow position: | chr21:30606937-30607108 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 33, 158 |
| Conread position: | 1-170 |
| Cow position: | chr21:34151734-34151565 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 112, 51 |
| Conread position: | 1-170 |
| Cow position: | chr21:34390826-34390994 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 113, 153 |
| Conread position: | 1-170 |
| Cow position: | chr21:36795752-36795581 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 106, 158 |
| Conread position: | 1-170 |
| Cow position: | chr21:37344952-37345116 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 1-170 |
| Cow position: | chr21:38720398-38720233 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 120, 26 |
| Conread position: | 1-170 |
| Cow position: | chr21:40589333-40589504 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 80, 158 |
| Conread position: | 1-170 |
| Cow position: | chr21:41621274-41621105 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 114, 156 |
| Conread position: | 1-170 |
| Cow position: | chr21:42384657-42384491 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 1-170 |
| Cow position: | chr21:47363585-47363757 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 72, 159 |
| Conread position: | 1-171 |
| Cow position: | chr21:868775-868947 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 108, 141 |
| Conread position: | 1-171 |
| Cow position: | chr21:1059224-1059056 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 112, 51 |
| Conread position: | 1-171 |
| Cow position: | chr21:7377777-7377949 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1-171 |
| Cow position: | chr21:9940039-9940212 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1-171 |
| Cow position: | chr21:20153105-20152932 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 1-171 |
| Cow position: | chr21:20160825-20160656 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 1-171 |
| Cow position: | chr21:29978611-29978782 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1-171 |
| Cow position: | chr21:47713859-47714025 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 118, 51 |
| Conread position: | 1-172 |
| Cow position: | chr21:10004737-10004910 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 109, 40 |
| Conread position: | 1-172 |
| Cow position: | chr21:10673269-10673105 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-172 |
| Cow position: | chr21:23587031-23586857 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-172 |
| Cow position: | chr21:28989762-28989586 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 55, 33 |
| Conread position: | 1-178 |
| Cow position: | chr21:10264182-10264004 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 105, 166 |
| Conread position: | 1-178 |
| Cow position: | chr21:38900922-38900749 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-200 |
| Cow position: | chr21:31159546-31159349 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 153, 38 |
| Conread position: | 2-149 |
| Cow position: | chr21:10001223-10001075 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 39, 46 |
| Conread position: | 2-153 |
| Cow position: | chr21:30256126-30256274 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 111, 35 |
| Conread position: | 2-156 |
| Cow position: | chr21:44251695-44251850 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 97, 107 |
| Conread position: | 2-156 |
| Cow position: | chr21:46551955-46552112 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 2-159 |
| Cow position: | chr21:30848793-30848958 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 2-168 |
| Cow position: | chr21:5427088-5426924 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 2-169 |
| Cow position: | chr21:19258966-19258804 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-170 |
| Cow position: | chr21:27863365-27863534 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 111, 152 |
| Conread position: | 2-170 |
| Cow position: | chr21:30835511-30835344 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 104, 65 |
| Conread position: | 2-171 |
| Cow position: | chr21:43357108-43357280 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 111, 65 |
| Conread position: | 2-172 |
| Cow position: | chr21:42209481-42209654 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 3-158 |
| Cow position: | chr21:46132721-46132566 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-159 |
| Cow position: | chr21:28244617-28244459 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 116, 70 |
| Conread position: | 3-171 |
| Cow position: | chr21:15584272-15584442 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 3-171 |
| Cow position: | chr21:37235532-37235363 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 92, 136 |
| Conread position: | 4-159 |
| Cow position: | chr21:25383172-25383004 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 5-151 |
| Cow position: | chr21:36695945-36696092 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 5-170 |
| Cow position: | chr21:6713378-6713545 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 58, 152 |
| Conread position: | 6-168 |
| Cow position: | chr21:6388143-6387981 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 130, 104 |
| Conread position: | 6-170 |
| Cow position: | chr21:3818353-3818191 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 7-156 |
| Cow position: | chr21:18940437-18940583 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 132, 44 |
| Conread position: | 8-171 |
| Cow position: | chr21:36789937-36789769 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 9-170 |
| Cow position: | chr21:4281734-4281890 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 15-156 |
| Cow position: | chr21:18064779-18064921 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 29 |
| Conread position: | 19-156 |
| Cow position: | chr21:33997096-33997236 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 22-147 |
| Cow position: | chr21:17929709-17929836 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 100, 88 |
| Conread position: | 22-149 |
| Cow position: | chr21:44724240-44724365 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 22-169 |
| Cow position: | chr21:12154261-12154113 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 95 |
| Conread position: | 22-170 |
| Cow position: | chr21:12461839-12461989 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 93, 137 |
| Conread position: | 22-170 |
| Cow position: | chr21:24642648-24642501 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 94, 19 |
| Conread position: | 22-171 |
| Cow position: | chr21:28919395-28919546 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 25-171 |
| Cow position: | chr21:5636595-5636740 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 99 |
| Conread position: | 26-159 |
| Cow position: | chr21:9302303-9302437 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 84, 71 |
Show alignments to all cow chromosomes.