Cow genome map

Conread name: Ss1.1-Tra1-TCH01D020047.5

Conread position: 1-142
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 1-144
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 1-146
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 112, 0

Conread position: 1-149
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 66

Conread position: 1-149
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 1-150
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 108, 57

Conread position: 1-150
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 112, 34

Conread position: 1-150
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 74

Conread position: 1-150
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 1-150
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 23

Conread position: 1-152
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 1-152
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 1-152
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 1-153
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 41

Conread position: 1-153
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 75

Conread position: 1-153
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 1-153
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 39

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 106, 0

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 117, 54

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 1-158
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 1-159
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 108, 0

Conread position: 1-159
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 112, 139

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 109, 51

Conread position: 1-159
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 54

Conread position: 1-159
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 106, 71

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 126
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 132
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 111, 0

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 1-159
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 115, 47

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 0

Conread position: 1-159
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 76

Conread position: 1-159
Cow position:
Alignm length: 160
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 1-160
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 117, 40

Conread position: 1-161
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 106, 51

Conread position: 1-166
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 111, 59

Conread position: 1-166
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 112, 14

Conread position: 1-166
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 105, 40

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 1-166
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 140

Conread position: 1-166
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 105, 58

Conread position: 1-166
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 110, 59

Conread position: 1-168
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 1-169
Cow position:
Alignm length: 169
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 0

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 1-170
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 115, 59

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 109, 0

Conread position: 1-170
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 43, 39

Conread position: 1-170
Cow position:
Alignm length: 178
Alignm identity: 139
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 63, 164

Conread position: 1-170
Cow position:
Alignm length: 174
Alignm identity: 137
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 158

Conread position: 1-170
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 106, 60

Conread position: 1-170
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 104, 132

Conread position: 1-170
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 118, 21

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 117, 131

Conread position: 1-170
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 115, 157

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 116, 0

Conread position: 1-170
Cow position:
Alignm length: 174
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 158

Conread position: 1-170
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 112, 51

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 133
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 113, 153

Conread position: 1-170
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 106, 158

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 1-170
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 120, 26

Conread position: 1-170
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 158

Conread position: 1-170
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 114, 156

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 115, 0

Conread position: 1-170
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 72, 159

Conread position: 1-171
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 141

Conread position: 1-171
Cow position:
Alignm length: 174
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 112, 51

Conread position: 1-171
Cow position:
Alignm length: 173
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 1-171
Cow position:
Alignm length: 174
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 1-171
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 119, 0

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 112, 0

Conread position: 1-171
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 113, 0

Conread position: 1-171
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 51

Conread position: 1-172
Cow position:
Alignm length: 175
Alignm identity: 137
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 109, 40

Conread position: 1-172
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-172
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 105, 0

Conread position: 1-172
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 55, 33

Conread position: 1-178
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 105, 166

Conread position: 1-178
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 1-200
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 153, 38

Conread position: 2-149
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 46

Conread position: 2-153
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 111, 35

Conread position: 2-156
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 97, 107

Conread position: 2-156
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 2-159
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 2-168
Cow position:
Alignm length: 167
Alignm identity: 129
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 153, 0

Conread position: 2-169
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 2-170
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 111, 152

Conread position: 2-170
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 104, 65

Conread position: 2-171
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 111, 65

Conread position: 2-172
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 114, 0

Conread position: 3-158
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-159
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 116, 70

Conread position: 3-171
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 112, 0

Conread position: 3-171
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 136

Conread position: 4-159
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 5-151
Cow position:
Alignm length: 148
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 5-170
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 58, 152

Conread position: 6-168
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 130, 104

Conread position: 6-170
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 148, 0

Conread position: 7-156
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 44

Conread position: 8-171
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 104, 0

Conread position: 9-170
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 15-156
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 29

Conread position: 19-156
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 22-147
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 100, 88

Conread position: 22-149
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 22-169
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 95

Conread position: 22-170
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 137

Conread position: 22-170
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 19

Conread position: 22-171
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 25-171
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 99

Conread position: 26-159
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 84, 71

Show alignments to all cow chromosomes.