Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01D020047.5 |
| Conread position: | 1-116 |
| Cow position: | |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 113, 89 |
| Conread position: | 1-147 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 1-148 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-148 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 1-148 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 1-148 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 77, 98 |
| Conread position: | 1-149 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1-150 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 1-150 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1-150 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 93, 59 |
| Conread position: | 1-151 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1-151 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-151 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-151 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-152 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 90, 97 |
| Conread position: | 1-153 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 116, 11 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 93, 101 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 105, 89 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 112, 57 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 68, 52 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 61, 146 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 117, 52 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 116, 47 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 1-166 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-166 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1-166 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 109, 52 |
| Conread position: | 1-166 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 117, 52 |
| Conread position: | 1-169 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 105, 140 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 146 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 108, 128 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 52, 40 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 114, 153 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-171 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 1-171 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 85, 58 |
| Conread position: | 1-171 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 102, 158 |
| Conread position: | 1-171 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 120, 50 |
| Conread position: | 1-171 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 116, 33 |
| Conread position: | 1-171 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 117, 106 |
| Conread position: | 1-171 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-171 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1-185 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 2-148 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 2-159 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 2-159 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 2-166 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 2-170 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 92, 131 |
| Conread position: | 3-159 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 3-159 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 3-159 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 107, 43 |
| Conread position: | 4-159 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 5-170 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 115, 153 |
| Conread position: | 6-170 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 112, 79 |
| Conread position: | 7-151 |
| Cow position: | |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 10-170 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 103, 130 |
| Conread position: | 10-172 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 11-151 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 13-170 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 96, 51 |
| Conread position: | 22-170 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 87, 139 |
| Conread position: | 22-170 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 97, 16 |
| Conread position: | 22-173 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 23-173 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 24-149 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 20, 89 |
| Conread position: | 24-170 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 58, 133 |
Show alignments to all cow chromosomes.